Penaeus monodon (black tiger shrimp): 119570097
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Entry
119570097 CDS
T08784
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase A protein-like
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmoo03041
]
119570097
03012 Translation factors [BR:
pmoo03012
]
119570097
Enzymes [BR:
pmoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
119570097
5.6.2.6 RNA 3'-5' helicase
119570097
Spliceosome [BR:
pmoo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119570097
Translation factors [BR:
pmoo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119570097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
DEAD
Helicase_C
HA2_C
nSTAND3
HA2_N
AAA_19
AAA_14
PhoH
ATPase
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
119570097
NCBI-ProteinID:
XP_037773913
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MAENVKSWLYAFCGKKKVTPNYEVRNSGPKHRQRFLCEVRVGNYNYVGVGNSTNKKDAQA
NAAKDFVQFLIRQGEVNESEVPDLHGTDNAGGDGSGGLLGEGGFQPSMPMAPVPGLRDEG
NVYRPIQQGGRPMTYMERVEERKKVEDAEDVDLTANIHGNWTIENAKSRLHMFLQSNKIN
ADYKYSAVGPDHNRSFVAQMSFYVKQLGRELYGRETGSNKQAASKSCALSLVRQLFHLNV
IEAFSGTLKKKESEKLPPYEVQMSPELVTQMDAVLKSTEVFPVQPNLSDPSHPQSLMPDV
KPSEFQASEAPPVTSGVVSWSPPKPNWNTWTGCNIDEGPLATMNLDQISADLQRSHQERL
QTDRDLQNMTQQRAQLPVNAKKQEIMEAIYDNPIVIIRGNTGCGKTTQVCQFILDDYIQS
GSGAYCNIVVTQPRRISAVSVADRIATERGEELGQSIGYSVRFESVLPRPYGGXLFCTVG
VLLRKLEXGLRGVSHVIVDEIHERDIXYRLYLIVLRDMVRAFPDVRIILMSATIDISLFT
NYFVNPVVIEVPGRAFPVQEYFLEDCIEMTRFMPIPDSRKKNKKDKDEELPGDEPEENLN
IVTSDNYSPATKEAMAMLNEKDLSFELIEALLKYIKGQNLPGAVLIFLPGWNLIFALMRH
LTQHPQFSINGTFPFQVGRDVLVLPIHSQTSPXEDTRAVFGTVPDGSTKLFLATNIAESS
ITINDVVFVIDSCKAKMKLFTSHNNMTNYATVWASRTNLEQRKGRAGRVRAGICFHLCSA
QERFKKLDEHMTPEMFRTPLHEVALSIKLLRLGSIGEFLSKAIQAPPIDAVIEAEVTLRE
MKCMDVNDELTPLGRILARLPIEPHLGKMVILGCIFFCGDAMCTIAAHNSTSPEIFIIPP
EHKRLSPFQRAFAGNRYSDHIAALSAFTSWEEARIGGEAAEISFCDYKGLSMPTLRVTWE
AKVLKELLVSAGFPEECLLPQSYNFYGPDPKLDLVVALLTLGHYPNVCAHKEKRKVLTTE
SKAALIHKSSVNCNNRETSFPSPFFVFGEKIRTRAVSCKQMTMVTPIHLILFGVRRVEAV
EGVVRLDGWINLNMEPDVAARICALRPSVEHLIINGVANPEGITEPTHQDEQIMNCVKQL
CRLNAGRHNMEQIGMGGFNTPRPPRQFPGSGGAFNTQDLQDIGGSGGGPLHSKG
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatgtgaagtcatggttatatgccttctgtgggaaaaagaaggtcacaccc
aactatgaagtcagaaattcagggccaaagcatcgtcagagatttctgtgtgaggtgcga
gtcggcaactacaattatgttggtgttgggaactcaaccaacaagaaagatgcacaagcc
aatgcagcaaaggactttgtccagttcctcatccggcaaggagaagtgaatgagagtgaa
gttcctgatttacatggcacagataatgctgggggagatggcagtggaggactacttggg
gagggtggattccagccttctatgcctatggcacctgttccaggccttcgggatgaaggc
aatgtgtaccgcccaattcagcagggtggccgaccaatgacctacatggagcgagtggaa
gaaaggaagaaagtagaagatgctgaagatgttgaccttacggcaaacattcatggaaac
tggacaattgagaatgccaaatcacggctacacatgtttcttcagagtaacaaaattaat
gctgactataagtacagtgcagttggaccggatcataacaggagcttcgtagctcaaatg
tcattttacgtcaagcaacttgggagagagctatatggtcgtgaaactgggtctaataag
caggcagcaagcaaaagctgtgccctgtcacttgtcaggcagttgttccacttgaatgtg
attgaagctttctctggaactcttaagaagaaagagagtgagaagcttccaccttatgag
gttcagatgtctccggaacttgtcactcagatggatgctgtgctgaaatctacagaagtg
tttccagtacagccaaacctcagtgatccttctcatcctcagtcgttgatgccagatgtt
aagccttcagaatttcaggccagtgaggctcctccagtgacaagtggtgttgtgtcatgg
tctcctccaaagcccaattggaatacctggactggttgcaacattgatgaaggtccactg
gctacaatgaatttggatcaaattagtgcagacctccagagatcccatcaggagcgcctg
cagactgatcgggaccttcagaatatgacccagcaacgtgctcaactccctgtgaatgcc
aagaagcaagagatcatggaagctatatatgataatcctattgtcatcattagaggaaac
actggttgtggaaagactactcaggtttgccagttcattcttgatgactacattcagtct
ggctcaggagcttactgcaatattgtggtgacacaaccacggcgtatatctgcagtttcg
gttgctgaccgcattgcaactgaacgtggtgaagagctaggccaaagcattggatactct
gttcgttttgagtccgtgctacccaggccttatggagggntgttgttctgcacagtagga
gtgttattgaggaaactggaangaggacttaggggtgtgtcccatgtcattgtggatgaa
attcatgagcgagacatcnnataccgactttatttgattgtacttcgtgacatggtgcgg
gcttttccagatgtccgcatcatcctcatgtctgccaccatagacattagccttttcaca
aattattttgtgaatccagtagtaattgaggttcctggtcgagccttccctgttcaggag
tactttttagaggactgcattgagatgactaggtttatgccaataccagattcaaggaaa
aaaaataaaaaggataaggatgaggaactacctggagatgagccagaagaaaacctgaac
attgtgacgtcggataactactctcctgccactaaggaagccatggccatgcttaatgag
aaggacctgagcttcgagctgattgaggccttgctcaagtacatcaagggccagaacttg
cctggggcagtgctgattttcctccctggctggaacctcatctttgcccttatgaggcat
cttacccaacatccacaatttagtataaatggaacctttccttttcaggtgggacgagac
gtacttgtgttacctatacattctcaaacttccccttgagaagacacaagggcggtattt
ggaactgtgcctgatggatcaactaaattatttcttgccacaaacattgctgaatcatca
atcaccatcaatgatgttgtgtttgtgatagattcctgcaaagctaagatgaagcttttc
acatctcataacaatatgaccaattatgctacagtttgggcatcacgcaccaacctggag
caaagaaagggtcgagctgggcgagttcgagcaggaatatgcttccatttatgttctgca
caggaaagattcaagaagctagatgaacacatgacgcctgagatgttccgtactcctctc
catgaagttgctctctccatcaaacttctccgtcttggttccattggagaatttctttcc
aaggctattcaggctccaccaattgatgctgtcattgaagctgaagtaacacttagagaa
atgaagtgcatggacgtgaatgacgagttgactccattgggtcgaatcttggctcgcctg
ccaatagaacctcatcttggcaagatggtgattttaggctgtatattcttttgtggggat
gccatgtgcactattgcagcacacaattccacttcccctgaaatcttcatcattccacca
gaacataagaggttgagtccattccaaagagcctttgctggtaataggtacagtgatcac
atagcagctctgagtgctttcacttcctgggaggaggccaggattggaggggaggctgct
gaaatcagcttctgtgactacaaaggactctctatgccaactctccgggttacttgggaa
gccaaggttttgaaggagctccttgtaagtgcaggattcccagaagagtgtttactgcca
cagtcctacaacttctatggccctgacccaaaattggacttggtggttgcacttctcacc
cttggtcactatccaaatgtttgtgcacataaagagaagcggaaggtgctaaccacagaa
tccaaagcagcactgattcacaagtcttctgtcaactgcaacaacagagaaacgtccttc
ccatctcctttctttgtgtttggtgagaagataagaacccgtgctgtttcctgcaagcag
atgacaatggtaacaccaattcatctgatcctgtttggagtacggagagttgaagcagtt
gaaggtgttgttcggctggacggatggattaacttgaacatggagcctgatgttgctgca
agaatttgtgctttgaggccaagtgtggagcatctcattattaatggggtggcaaatcca
gagggcatcactgaacccacacatcaagatgagcagataatgaattgtgtgaaacagttg
tgtaggttaaatgctggtcgtcataatatggaacagattggcatgggaggctttaatacc
cctagacctccacgacagtttcctggcagcggaggtgcattcaatacccaagacctccaa
gacattggtggcagtgggggtggacctctccattcaaaaggatga
DBGET
integrated database retrieval system
