Penaeus monodon (black tiger shrimp): 119594067
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Entry
119594067 CDS
T08784
Name
(RefSeq) LOW QUALITY PROTEIN: TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo04120
Ubiquitin mediated proteolysis
pmoo04140
Autophagy - animal
pmoo04144
Endocytosis
pmoo04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119594067
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119594067
04140 Autophagy - animal
119594067
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119594067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmoo04131
]
119594067
04121 Ubiquitin system [BR:
pmoo04121
]
119594067
Enzymes [BR:
pmoo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119594067
Membrane trafficking [BR:
pmoo04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
119594067
Ubiquitin system [BR:
pmoo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
119594067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
TRAF3_RING
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
Sina_ZnF
zf-TRAF_2
RING_XB3-XBAT31
zf-RING_6
zf-Nse
DUF5740
Motif
Other DBs
NCBI-GeneID:
119594067
NCBI-ProteinID:
XP_037799036
LinkDB
All DBs
Position
33:14918328..14926614
Genome browser
AA seq
594 aa
AA seq
DB search
MECVEESITILSRQEGFDYEFVPPLDPKYECAICLLGLRSPIQTTCGHRFCKDCIFNCMS
ESSSRCPVDNTPLTEVDLFPDSCAEREILQLSVKCPNHGLGCRRTVDLMYIEHHTQACSF
QPVMCPNECSATVLRKEVEQHLSSECVLRVKKCALCEQPFTFNQEQLHLLSCVRVTVPCE
MCGAMMPRGEVAGHMTETCPKVVVACTFAEHGCHHKMTRADLNQHMLQATQLHLQLLSSA
YKKINTFVSDLSRTVGLIQSPFGNFSRQPSLRSQISATSPIPENHTSPSLPERTLEKSLG
ATGGTVGCNEKSGVFSSPQSGDKGGADSGIELNKLHLQLNQVSIEGVGKSPSSKSLSTVS
HQEIILRDLCEKSVDLNQRMLEETIKLSNLAKRIEEVDALVEAQLMEMSGKYCNGDYVWR
IKNFSQFCAELQNKPGRVCHSPSFYTSQFGYKFCLRTNITWKSDQYFLTLFIHGMQSEND
DFLDWPFSGRITLSVLDCDTSLPKKHITETMVTKPGLQAFKRPDVARNPKGFGFTEFVPL
AKILQPSIGTFLKNDTLCIRATVCPNTWNHESSQSMEKLGIFKEKLHIEKQSCV
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgtcgaagagtccatcacaattttgtctcgtcaggagggatttgattatgaa
tttgtccctccacttgaccccaagtatgagtgtgccatatgtctactgggattgcgctca
cctatacaaactacttgtggtcaccgcttttgtaaagactgtatcttcaactgtatgagt
gagagcagtagccgctgtccagttgataatactcctctcacagaagttgatttgttcccc
gactcgtgtgctgaacgtgagatattgcagcttagtgttaaatgtccaaatcatggcttg
ggctgtaggcgaacagttgacttgatgtatatagagcatcatactcaagcttgttctttt
cagccagtcatgtgccctaatgaatgctcagcaacagtgttacggaaagaagtggaacag
catctgagttcagaatgtgtcctgcgggtaaagaaatgtgctctctgcgagcagcctttc
actttcaatcaggagcaactgcatttgttaagttgtgtgcgtgtgacagtcccttgtgag
atgtgtggagctatgatgccacgtggggaagttgcaggacacatgacagagacatgccca
aaggtggtggtggcatgcacttttgctgaacatggctgccatcacaagatgactcgagct
gatttaaaccaacatatgttgcaagccacgcagctacatctgcagcttctgtcttcagca
tacaagaagatcaacacctttgtgtcagatcttagtcgtacagtaggtctaattcaatct
ccgtttggaaacttcagtcgacaaccaagtttacgcagccagatatcagcaacatcaccc
atcccagagaatcacacaagtccatcacttccagaaagaaccctagaaaagtccttaggt
gcaactggagggacagtaggctgtaatgaaaaatcaggtgtcttttcctctcctcagtct
ggggacaaaggcggtgctgactcaggtattgaactgaacaagcttcacctacagctgaac
caagtgagtatagaaggagtaggcaagagtccatcttcaaagtctttgtccacagtgtct
catcaagaaattattttaagggatctctgtgagaagagtgtagatttgaatcagaggatg
cttgaagaaaccatcaaattaagtaatttagctaaaagaattgaagaagttgatgccctt
gttgaagctcagctaatggaaatgagtggaaaatattgtaatggtgattatgtttggaga
atcaaaaatttctcccaattttgtgcggaattacagaacaaaccaggaagagtatgtcac
agcccatcattctacacatcacaatttggatacaagttttgtcttcgaactaatatcaca
tggaagtctgatcagtattttttaactctatttattcatggaatgcaaagtgagaatgat
gacttcctggactggccctttagtggacgcataactctttctgtactagactgtgataca
tcattacctaaaaaacatatcacagagaccatggtgactaaaccaggtctgcaggctttc
aagcgtcctgatgttgcccgtaatccaaaaggatttggattcacagaatttgtacccctt
gcaaaaatacttcaacccagcataggaaccttcctcaaaaatgatactctctgcattaga
gcaactgtttgccctaacacttggaaccatgagagtagtcagagcatggaaaaacttgga
atattcaaagaaaagcttcatattgagaagcaaagctgtgtgtaa
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