Pseudomonas monteilii SB3101: X970_17275
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Entry
X970_17275 CDS
T02973
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
pmot
Pseudomonas monteilii SB3101
Pathway
pmot03030
DNA replication
pmot03410
Base excision repair
pmot03420
Nucleotide excision repair
pmot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
X970_17275
03410 Base excision repair
X970_17275
03420 Nucleotide excision repair
X970_17275
03430 Mismatch repair
X970_17275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmot03032
]
X970_17275
03400 DNA repair and recombination proteins [BR:
pmot03400
]
X970_17275
Enzymes [BR:
pmot01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
X970_17275
DNA replication proteins [BR:
pmot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
X970_17275
DNA repair and recombination proteins [BR:
pmot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
X970_17275
NER (nucleotide excision repair)
GGR (global genome repair) factors
X970_17275
MMR (mismatch excision repair)
DNA ligase
X970_17275
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
X970_17275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
AHC89061
UniProt:
V9V2D2
LinkDB
All DBs
Position
complement(3665928..3668258)
Genome browser
AA seq
776 aa
AA seq
DB search
MTAETRIHELRAELDQHNYRYYVLDEPSVPDAEYDRLFNELKALEAEYPHLVTPDSPTQR
VGGAALAAFSQVRHEVPMLSLGNAFEEADLREFGRRVVDGLDQPGAVDYSCEPKLDGLAV
SLLYRDGLLVQGATRGDGTTGEDISANVRTVRNIPLRLQGEGWPTVLEVRGEVYMSKAGF
DRLNAAQAEAGGKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGVGQVSASIGDSHIGI
LEQLKAWGLPISRELKHAAGIEECLAYYRDIGERRNSLPYEIDGVVFKVNSLAAQRELGF
RAREPRWAIAHKFPAMEELTEVLDVEFQVGRTGAVTPVARLKPVKVAGVTVSNATLHNMD
EIARLGLRVGDTVIIRRAGDVIPQVMQVVLERRPEDARPVQVPSECPVCGSQVERTQLVK
RSKGKETTSEGAVYRCVGRLACGAQLKQAIIHYVSRRAMDIDGLGEKSVEQLVDEGLIGS
PADLYKLEFDQIVGLEGFAEVSSKKLLDAIEASKRPGLARFIYALGIPDVGEETAKVLAR
SLGSLARVQQALPQVLTYLPDIGLEVAYEIHNFFEDEHNRKVIKQLLDSGMQLQDEGELA
AEFAASTTLAGMIAKLDIASVGPTGAEKLVAKLDSLDKIIAADGIDLRQALAAKQAEAVR
EFFKDEANQKLARDIEAQLLAFGMHWSSEKKVAEGLPLAGQTWVLTGTLERMSRDIAKEK
LESLGAKVAGSVSGKTHCVVAGPGAGSKLAKASELGVKVLDEDAFVTFLGEQGIAV
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgaaacccgtatccacgaactgcgtgccgagctcgaccagcacaactatcgc
tactacgtgctcgatgagccaagcgtgcccgatgccgaatacgaccgcctgttcaacgag
ctcaaggcgcttgaagccgaatacccgcacctggtaacccccgactcgcccacccagcgc
gtcgggggcgcagccctggccgcgttcagccaggtccgccacgaagtgcccatgctcagc
ctgggcaacgctttcgaagaagccgacctgcgtgagttcggccgccgcgtggtagacggc
ctcgaccagcccggtgcggtcgactacagctgcgagcccaagctcgacggcctggccgtg
agcttgctgtaccgcgacggtctgctcgtacagggcgccacccgtggcgacggcaccacc
ggcgaagacatcagtgccaacgtacgcaccgtgcgcaacatcccgctcaggctgcaaggc
gagggatggcctacggtgctggaggtgcgcggcgaggtttacatgagcaaggccggtttc
gaccggctcaacgccgcccaggccgaagccggtggcaagaccttcgccaacccgcgcaac
gccgcagccggcagcctgcgtcagctggactcgaaaatcaccgccagccgcccgctggaa
ttctgctgctatggcgtcggccaggtgtccgcgagcatcggcgacagccacatcggcatc
ctcgaacagctcaaggcgtgggggttgccgatcagccgcgaactcaagcatgccgccggt
atcgaagaatgcctggcctactatcgcgacatcggcgagcgacgcaacagcttgccctac
gaaatcgacggcgtggtgttcaaggtcaacagcctggccgcccagcgcgaactgggcttc
cgtgcccgtgagccccgctgggcgattgcccacaagttcccggccatggaagagctgacc
gaggtgctggatgtcgagttccaggtcggccgcaccggcgccgtaacgcccgtggcacgc
ctgaagccggtcaaggtggccggtgtgaccgtgtccaacgctaccctgcacaacatggac
gaaatcgcccgcctgggcctgcgcgttggcgacacggttatcatccgccgcgccggtgac
gtgattccgcaggtgatgcaggtggtgctggagcgccgcccagaggatgcgcgcccggtg
caggtgccgagtgagtgcccggtatgcggctcgcaggtcgagcgtacccagttggtcaag
cgtagcaagggcaaggaaacaaccagcgagggggcggtgtaccgctgcgtcggtcgcctg
gcctgtggcgcccaactcaagcaggcgatcatccactacgtgtcacgccgcgccatggac
atcgatggcctgggcgagaagagcgtcgagcaactggtggacgaaggcctgatcggttcg
ccggccgacctgtacaagctggaattcgaccagatcgtcggcctggaaggctttgccgaa
gtgtccagcaagaagctgctggatgccatcgaagccagcaagcgcccgggcctggcgcgc
ttcatctacgccctgggtatcccggacgtaggcgaggagaccgccaaggtgctggcccgc
tcgctgggcagcctggcgcgggtgcagcaggcgctgccgcaggtgctcacctacctgccg
gacatcggcctggaggtggcgtacgagatccacaacttcttcgaggacgagcacaaccgc
aaggtcatcaagcagttgctcgacagcggcatgcaactgcaggacgaaggcgagctggct
gccgagttcgccgccagcaccaccctggccggcatgatcgccaagctcgacatcgcctcg
gttggcccgaccggtgccgagaagctggtggccaagctagacagcctggacaagatcatc
gccgccgatggtatcgacctgcgccaggccctggcggccaagcaggccgaagccgtgcgc
gagttcttcaaggatgaagccaaccagaagctggcccgggacatcgaggcacagttgctg
gcgttcggcatgcactggagcagcgagaagaaagtggccgaaggcttgccgctggccggc
cagacctgggtgctgaccggcaccctggagcgcatgagccgcgacatcgccaaggaaaag
ctggaaagcctgggggccaaggtggcgggttcggtatccggcaagacccactgcgtggtg
gcggggccgggggcggggtccaagctggccaaggccagtgagttgggtgtgaaggtgctt
gatgaagatgccttcgtcaccttcctgggcgaacagggcatcgctgtctga
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