Petromyzon marinus (sea lamprey): 116937575
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Entry
116937575 CDS
T09614
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn00514
Other types of O-glycan biosynthesis
pmrn04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
116937575
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116937575
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pmrn01003
]
116937575
Enzymes [BR:
pmrn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
116937575
Glycosyltransferases [BR:
pmrn01003
]
Glycan extension
O-Glycan
116937575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
SOG2
DUF1631
Motif
Other DBs
NCBI-GeneID:
116937575
NCBI-ProteinID:
XP_032800609
UniProt:
A0AAJ7SK65
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MVVVVVAMLVARGPVPASNRRGPWLPAGRPWPRGRCRPAARGHGGDHVVSETPLPWWARE
QQQQSSAAAASTAAPPPPPPSSSASSAVTAARAASSSSSAVASLSALLKSSLSSLLSSAS
SSASSSSAAASSAPKPPPPPPSSPRSLSSILSLRSRAADVAAADAADDAADDDSGGGGAA
DDDADGESLRVTDVFVAVKTSWKFHATRMRLLMKTWLGLARDHTFVFTDGEDEELNRELG
GHLLQTNCSSAHSRQALSCKMAVELDTFLRGSHKWFCHVDDDTYLNTGALLGLLRRFSHR
RDLYLGRPSLDHPIHTQHQEAAAEFWFATGGAGFCLSRGLTLKMSPWVSGGEFMATAERI
RLPDDCTVGFVSEWLLGIPLTHSALFHSHLEGLAQLPTQSLTSQVSSSPTHPPTHPLTYS
PTGSGSAAHPVPHQPGE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggtggtggtggcgatgctggtagccaggggccccgtgccggcgtcgaaccga
cgaggcccgtggctgcccgcgggccgcccgtggccccgtggccgctgccgcccggccgct
cgagggcacggaggcgaccacgtggtctcggagacgccgctgccgtggtgggcacgagaa
cagcagcagcaatcatcagcagcagcagcatcaacagcggccccaccaccaccaccacca
tcatcatctgcatcatcagcagtaacagcagcaagagcagcatcatcatcatcatcagca
gtggcatcactgtcagcgctgctgaaatcctctctgtcatcactactgtcatcagcatca
tcatcagcatcatcatcatcagcagcagcatcatcagcacccaaaccaccaccaccacca
ccatcatcaccgcgttcactctcatccatcctatcactgcgatctcgcgctgctgatgtt
gctgctgctgatgctgctgatgatgctgctgatgatgattctggtggtggtggggctgct
gatgatgatgccgatggcgaatcgctccgcgtgacggatgtgttcgtggccgtgaagact
tcctggaagttccacgcgacgcgaatgcgtctcttgatgaagacctggctgggactggcc
agggaccacactttcgtgttcacggatggtgaggacgaggagctgaatcgtgaacttgga
ggccacttgctccagacgaactgctcctccgcccactcacggcaggcgctgtcctgcaag
atggcggtcgagttggacactttcctgcgcggatcacacaagtggttctgccacgtggat
gacgacacgtacctcaacacgggcgccctgctgggtctgctgagacgattctcacaccgc
agggacctgtacctgggtcgtccctcactggatcaccccatacacacccagcaccaggag
gctgctgctgagttttggtttgcgaccggcggtgccggattctgtctcagtcggggactc
acactcaagatgtctccctgggtcagtggtggagagttcatggcgactgcagagagaatc
cgcttgccagacgactgcacggttggattcgtgagcgaatggcttctgggaattccgctc
acccactcagcgctattccactctcatctagagggtctggctcagctacccacccagtcc
ctcaccagtcaggtgagtagctcacccactcacccacccactcacccactcacctactca
cccacagggtctggctcagctgcccacccagtccctcaccagccaggtgagtag
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integrated database retrieval system
