Petromyzon marinus (sea lamprey): 116938399
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Entry
116938399 CDS
T09614
Symbol
PUS3
Name
(RefSeq) tRNA pseudouridine(38/39) synthase
KO
K01855
tRNA pseudouridine38/39 synthase [EC:
5.4.99.45
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmrn03016
]
116938399 (PUS3)
Enzymes [BR:
pmrn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.45 tRNA pseudouridine38/39 synthase
116938399 (PUS3)
Transfer RNA biogenesis [BR:
pmrn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
116938399 (PUS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF1192
Motif
Other DBs
NCBI-GeneID:
116938399
NCBI-ProteinID:
XP_032801411
UniProt:
A0AAJ7WKT3
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MRLPFNRSPLLFIRSLHPFIRSLHPFNRSPHPFIRSPHPFIRSLHPFNRSPHPFIRSPHP
FIRSLHPFNRSPQPFNRSPLAFNRSALPLICCAMDWTPSNVSGAGESGGGGGGDSPTTVS
SSSSSPPPSTAARQKLLGLSKDELVARIEELKRKVAAMSEASRSRPPGYGGGGGDGRGGG
SRGGGGGVGGGRGDGGGDGGHHGGDGGGDGGDGGHRGGGGDGRGGGVKGGKAGKGNKGRE
GGKAAVARRPFDFSRHNRRHVLLKLAYLGWDYHGYAAQDNTRNTVEEQLFEALDKTRLVE
SRQAANYHRCGRTDRGVSAIDQVVSITLRSNLAQGKGVIPTPNADVPPGATELRYAHILN
KVLPRDIRVLCWAPVEAGFSARFDCSRRRYRYWFPRGRLDIVAMRAAALGLVGSHDFRNL
CKMDVANGVVGFRRTVISADVRRADGEEGG
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcccgttcaaccgctctcccctgctgtttatccgctctctccacccgtttatc
cgctctctccacccctttaaccgctctccccacccgtttatccgctctccccacccgttt
atccgctctctccacccctttaaccgctctccccacccgtttatccgctctccccacccg
tttatccgctctctccacccgtttaaccgctctccccaaccgtttaaccgctccccgcta
gcgtttaaccgctctgccctcccgctaatctgctgtgcgatggactggacaccctcaaat
gtcagcggagccggggagagtggtggtggtggcggcggtgatagccccaccaccgtatca
tcatcatcatcttcaccgccgccatctacagccgccagacagaagctcctgggcctgtcc
aaagacgaactcgtcgcaagaatcgaggagctcaagaggaaggtggcggccatgagcgag
gcgtccaggtcgaggccgccgggctacgggggcggtggcggtgacggcagaggtggcggc
agcagaggaggaggtggtggtgttggtggtggcagaggcgatggtggtggcgatggtggt
catcacggtggcgatggcggtggcgatggtggcgatggtggtcatcgcggtggcggtggc
gatggcagaggaggaggagtcaaaggtggcaaggctggcaaaggcaacaagggcagagag
ggtggcaaagcggcggtggcacggaggccgtttgacttctccaggcacaatcggcgccac
gtgcttctcaagctcgcttacctgggctgggactaccatgggtacgcggcccaggacaac
actcgcaacactgtggaggagcagctgttcgaggcgctggacaagacgcggctcgtcgag
tcgcgtcaggcggccaactaccaccgctgcggacgcacggaccgaggggtgagcgccatc
gaccaggtggtgtccatcaccctgcgctccaacctcgctcaaggcaaaggcgtcatcccc
acgcccaatgccgacgtccctccgggagcgacggagctccgctacgcacacatcctgaac
aaggtcctcccgcgtgacatccgcgtgctgtgctgggcccccgttgaggctggcttcagc
gcgcgtttcgactgcagccgccgccgctaccgctactggttccctcgcgggcgcctggac
atcgtggccatgagggcggccgccctgggcctcgtgggcagccacgacttccgcaacctg
tgcaagatggacgtggccaacggcgtcgtcggcttccgccgcacggtgatcagcgcggac
gtgaggcgtgccgacggtgaggagggtgggtga
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