Petromyzon marinus (sea lamprey): 116938568
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Entry
116938568 CDS
T09614
Symbol
BBS5
Name
(RefSeq) Bardet-Biedl syndrome 5 protein
KO
K16748
Bardet-Biedl syndrome 5 protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmrn03037
]
116938568 (BBS5)
Cilium and associated proteins [BR:
pmrn03037
]
Primary cilia and associated proteins
BBSome
116938568 (BBS5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BBL5
Vps36_ESCRT-II
bPH_3
Motif
Other DBs
NCBI-GeneID:
116938568
NCBI-ProteinID:
XP_032801754
UniProt:
A0AAJ7WL37
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All DBs
Position
4:9343903..9355620
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AA seq
345 aa
AA seq
DB search
MDGNAAIGTLWEDREVRFDVSPQLMKPRAGELVLDTMESVEDTKGNNGESGRLVVTNLRV
LWNSHSFYRINLTIGFNCVMSIEKRMVNSKLRGHTEALYILTKCGNTRFEFIFTNLESGS
PRLFTSIITVCRAYGTSKMYRDLKLRAAIVSDGNLRLLPGEELCRRLDGVWNLSSEQGNL
GSFFITNIRVVWFAAMNMCFNVSIPFLQIRSVKLRDSKFGAALVIECTQQSGGYVLGFRA
DPPDLMRTLSQELQSLHRVFAAKPDMGVRFHMEEMPAPLEKVTEVQEDDDLKLEPGFSKS
DAHTAYFADENKPRDREVVFSTELGLAIEKLRDGFTLQGLWDATA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaacgcggcgatcgggactctatgggaggacagagaagtccgcttcgatgtc
tcgccgcagctgatgaagccccgagccggagagctcgtcctggacacgatggagtccgtg
gaggacaccaaggggaacaatggagagagtgggaggctggtggtcaccaacttgcgcgtg
ctctggaattcgcattccttctaccgcatcaacctgaccatcggcttcaactgtgtcatg
agcatcgagaagcgcatggtgaactcgaagctgcgcggacacaccgaggcgctgtacatc
ctcaccaagtgtggaaacactcgcttcgagttcatcttcacgaacctggagtcgggcagc
ccgcggctcttcacctccatcatcaccgtgtgcagggcgtacggaacgtccaagatgtac
cgggacctgaagctgcgcgcagccatcgtcagcgacgggaacctgcggctgctgcccgga
gaagagctgtgccggcggttggatggggtgtggaacctgtccagcgagcagggcaacctg
ggtagcttcttcatcacgaacattcgagtcgtgtggttcgcagccatgaacatgtgcttc
aacgtcagcatccccttcctgcaaatccgatccgtgaagctccgggactcaaagtttgga
gccgccctcgtcattgagtgcacacagcagagtggcggctacgtgctgggattccgtgcc
gacccccccgacctcatgcgcacgttgtcgcaggagctgcagagcctgcaccgcgtcttc
gcagcaaagcccgacatgggtgtgcgcttccacatggaggagatgccggctccactggag
aaagtgacggaggtgcaggaggacgatgacctgaagctggagcctgggttctccaaaagc
gatgctcacacggcttactttgctgatgagaacaagcccagggaccgtgaggtggtcttc
tccaccgagctgggcctcgccatcgagaaactgcgagacggtttcaccctgcagggcctc
tgggacgcaacggcgtga
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