Petromyzon marinus (sea lamprey): 116940469
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Entry
116940469 CDS
T09614
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein-like
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116940469
Membrane trafficking [BR:
pmrn04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
116940469
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
116940469
NCBI-ProteinID:
XP_032806236
UniProt:
A0AAJ7SWX3
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Position
9:complement(2742744..2747675)
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AA seq
991 aa
AA seq
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MDSGGEVLTAEGEYKVFKMDNGARVSGVDALLEVNDGGGASGVDRATAKVDSRDKASGAG
KSFKVDNGNGGNKVLMMANGGGAFGAGETLKVGNGNVALDLYKALKMDKRGEALCASEVE
DGAKALRANDVLKKTNEGGKASGRDEVVKMNKVDKVSRKAKRVAKMGKSPNTATVGTALR
RDDTNAPDGAWGLDEVDTVCDLDALDTVCDLDALDTVCDLDALDTVCEVDDLGPLEQILS
AGVLAKVRCGRSFAMARSGRALVSLDHADRFGYANVSDAIVDVLVLPPPGTAATDAAPEP
EEEESPAEATPPAPPPAVALVAVVFESGRVDFWRSDVRRQRHEMSPAGRADLCISPRARV
LSAAAFSSCLLWCESRSSSAPRSSRDLLLRHCVCRRAVSQATGGGGPATLGGVQVLLHGC
PTLHVVPSADVVHLVPFQRNPTPLQSLLPLWSPRDGTVSAVALRRGGVVCARRPDSDADF
KGLALGCASPPPTGEPIVAHTACRGGGLLLGLSDGRVWRVERDGACRVLCRCDLLRRGSR
LDMLAVKNALAVASDRDVEMFDTRSGHLIRKIKGGVCILSIMSDRDEDEFRFLTEKGIYR
VDTEPARSHGSGSLRPQDVLSAWVYEEACSYYQKRSLTGNKITPEQLKQGGAGKGAASVV
AILSHAVCPKNTNSQAAPFSVNLENALKPLIESYVKIEQIKRTFVVDDEAEIQYAEFIKE
EVSRLLQGRDMGTPQRFQSLLDTFLSETLSAVWDILGPNNDGAAAAGAAGGGTNESWRCV
MQENTDRDCVPPVYEQLCVALYQHRPEDLLPFVGAAQESQRAVPRSRLSADSAATPPHLR
ALFVLPESKGGSGGGGGEEAAFIRTELLCRGSPEDAAQAIQLLLSMGMWQQAVAAASRYR
IDNQMLQAQVFTTFLDAFTCSRGLDPYVGKVWELCPDSMTATDVLATVLHNLPNSHDEAQ
PFGRRDAQITIELLRPLLTRLLLKESARFEM
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggaggcgaggtgttgacggcggagggcgaatacaaagtgttcaagatggac
aatggagcgagagtgtctggtgtggacgcgctgttggaggtgaacgatggaggtggagca
tcgggcgttgacagggcgacggcgaaggtggacagcagagacaaagcgtcgggtgcgggg
aagtcgttcaaggtggacaatggaaacggtgggaacaaggtgttgatgatggcaaatgga
ggtggagcatttggcgctggcgagacgttaaaggtgggaaatggaaacgtggcgttggac
ttgtacaaggcgttaaagatggataagagaggcgaggctttgtgtgcgagcgaggtggaa
gatggggccaaggcgttgcgtgcgaacgacgtgctaaagaagacaaacgagggaggcaag
gcgtcgggtagagacgaggtggtgaagatgaacaaagttgacaaggtctcgcggaaggcc
aagagagtggcaaagatgggcaagtcgcccaacactgccacggtgggcacggcgttgagg
agagacgacaccaacgcgccggatggggcgtggggactggacgaggtggacacggtgtgc
gacctggacgcgctggacacggtgtgcgacctggacgcgctggacacggtgtgcgacctg
gacgcgctggacacggtgtgcgaggtggacgatttggggccgctcgagcagattctgtcc
gctggcgtcctggccaaggttcgctgtgggcgctcgttcgccatggcccgtagcggccgg
gcgctcgtgagcctcgaccacgccgaccggtttgggtacgccaacgtgtcggacgctatc
gtggacgtgctcgtgttgccgccgcctgggaccgccgcgaccgacgcggcgcccgagccg
gaggaggaggaatcgcccgcggaggcgacgccgccggcgccccctcctgctgtggcgctg
gtggcggtggtgttcgagagcgggcgcgtggatttctggaggagcgacgtgcggcggcag
cggcacgagatgtcaccggcaggacgtgccgacctgtgcatcagccctcgtgccagggtg
ctgtcggcggccgctttctcgtcgtgcctgctgtggtgcgagtcccgctcctcttccgcg
ccgcgctccagcagggacctgctgctgcgccactgcgtgtgcaggcgggccgtgtcgcag
gccaccggcggcggcggccccgccacgctgggaggcgtgcaggtgctgctccacggctgt
cccaccttgcacgtggtgccgtcggcggacgtggtgcacctcgtgcccttccagcggaac
cccacgccgctgcagtcgctgctgccgctgtggtcgccgcgcgatggcaccgtgtcggcg
gtggccctgcgccgcggcggcgtcgtctgcgcaaggcgcccggactcggacgccgatttc
aagggcctggcgctggggtgcgcgagcccgccgcccaccggcgagcccatcgtggcgcac
accgcttgccgcggagggggcttgctgctgggcctctccgacggccgtgtgtggcgtgtg
gagcgcgatggggcgtgccgcgtgttgtgccgctgcgatctgttgcggcgcggctcgcgt
ttggacatgctggctgtcaaaaacgcattggccgttgcctccgatagggacgtggaaatg
ttcgacactcggagtgggcatctgataaggaaaataaagggcggcgtttgcatcttgagc
atcatgtcggacagggacgaggatgagtttcgttttctgactgaaaaaggaatttaccga
gttgacacagagccagcacgatcgcacggcagtggcagcttgagaccacaggacgtttta
tctgcttgggtctatgaagaggcctgcagttactaccagaaacgaagtttgactggcaac
aaaattacaccggagcagctgaaacaaggtggcgctggaaaaggagctgcttctgttgtg
gccatcctttcccatgccgtgtgtcccaaaaataccaattcacaggccgcacccttttct
gtgaatctggaaaatgcactgaagcctttgatcgaaagctatgtaaaaattgaacaaatc
aagcgtacatttgttgtggatgatgaagcagaaattcaatacgccgagttcatcaaagag
gaggtgtccaggctgctgcagggcagggacatgggcacacctcagcgattccagagtctc
cttgacacattcctgagtgaaactctgtcagcagtttgggacatcctggggcccaataat
gatggagcggcagcagcaggagcagctggaggagggacaaacgaatcctggcggtgcgtg
atgcaggagaacacggaccgggactgcgtgccacccgtctacgagcagctctgcgtggcg
ctgtaccaacaccggcccgaggatctgcttccctttgtgggagcggcgcaggaaagtcag
cgagcggtgcccaggtcacgtctgtcggccgacagtgccgccacacctccgcacctgcga
gcgctgttcgtgctgccggagagcaaaggcggcagcggcggcggcggcggcgaagaagcg
gcgttcatccgcaccgagctgctgtgcagaggctcgccggaggacgcagcgcaggccatc
cagctgctgcttagcatgggcatgtggcagcaggctgtggcggccgccagccggtaccgc
atcgacaaccaaatgctgcaggcccaggtgttcaccaccttcctcgatgcgttcacctgc
agccgggggctggacccgtacgtgggcaaagtgtgggagttgtgcccggacagcatgacc
gctacggacgtgctggccacggtgctgcacaatttgcccaactcgcacgacgaggcgcag
cccttcggtcggagagacgcgcagatcaccatagagctcctgcgcccacttttgacgcgg
ctgctgctcaaggagagcgcacggtttgagatgtga
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