Petromyzon marinus (sea lamprey): 116940862
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Entry
116940862 CDS
T09614
Symbol
FYCO1
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1 isoform X1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116940862 (FYCO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116940862 (FYCO1)
Membrane trafficking [BR:
pmrn04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116940862 (FYCO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUN
FYVE
GOLD_2
Motif
Other DBs
NCBI-GeneID:
116940862
NCBI-ProteinID:
XP_032807047
UniProt:
A0AAJ7SYX3
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All DBs
Position
10:5399011..5456087
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AA seq
1155 aa
AA seq
DB search
MNDSMDSMDAMEFHNIQAESQVQRITRELHDCVTELSREYRECGDPVTDDNASLNKLCTK
LEYMLQFGQKEKRTLMGIRREYWDYFHDCLAKQKGANDGIRFVKSIPELKTAIGKGRAFI
RYSLVHQRLADTLQQCFTNKPVTSDWYSTKSPLVKKELVTEMISHLYELNQLPFDLAPRG
YDLDAEWPSYARRALGASASPAQLWKAPSRSSSINSLASSFSPMHMEAYAKHDSAFMQPL
DTPGKLDATAHGHLYLDHPVLQLHHNAEQQALEEQVESLQIHLDQAELRLRREQDRSDAL
EGERRDVQATALLAERSLLQAVDDARRDKRGLLQENEALQLRLCDLQKMLDESKRDVAML
EGKVSSLEKDAAACEPRADRARAETAFLQGGAPIHPDVAVCDPEGEDNVGALALTAEDRR
QGEVLEGNRSDFDPMARSEIAKLRCQLELSEQQLQWRQADVTRLTTEVGELRSRLGVSKE
EVQKLKRSAAEQALSSKMQRQELESLKVDLVNVNRVHVEQLLQMKEELGDLEKEREFLLK
KKSDYELKLLSNEEENLQLSHCLEEYERKNLEFEERLYKAHEEADELRSQISQIASEKDL
LVEKIDSTISEFTMSVQQHGQESEELKLELERLTGENTALMEHVQSLQCLKEANDDLQTH
LEKTKEKIHMLQESQRQELSSMKFKMSLEIIDFQTRLKKHTEENEKLKSGNSNKDTVISN
LNAKVKTLKADYQLLQDLSIAQEENFNEQLRERLKKEEEGIGLRKALDRQFGSWFSFSGN
TNLQRIDRCKETLESEQKDHKNLMKELAIVKSRAEEEEKNLLSEIQELKETMANMSDRLI
ELLKDKDVLWQKSDMLEFEQRLRAEERFEKDVGAQHCLDCKNEFSWMLRRHHCRLCSRSF
CYYCCNNWASLRTGEKKERVCRSCFACHGPSALGGGTPSPSESPSTASNPLVSPAGERPA
PDDLNFDIITEEEVGESSQLASPSENEEAEKDVSIDRTAEESQPAPLALEPEILLLKNSD
PSFNVPLSPEDVRCFGECRRELHVKAGAYAVITMNVTESGLSLAWEFSSENRNVSFSVVW
RDRPEQPVESSVVLIPLTRCNSHLQLVQGQLKARRPGLYLLIFDNSFSRFYGKKVSYHLT
VSKTLMYDGTDETDP
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattcaatggattcaatggatgcaatggagtttcacaacatacaagctgagagt
caagttcagcgaattactcgcgaattgcatgattgtgtgacggagctcagcagagagtac
agagagtgtggagaccctgtgacagacgataatgccagcctgaacaagttgtgcacaaaa
ctcgagtacatgttacagtttggtcaaaaggagaaacggaccctgatgggcattcgaagg
gagtattgggactactttcacgactgtcttgccaaacagaaaggagctaatgatggaatc
cgtttcgtcaagtcgatccctgagttgaagactgcgatcggaaaaggaagggcatttatt
cggtactcactcgttcaccagaggcttgcagacactcttcagcagtgcttcacgaacaag
ccagttaccagtgactggtacagcacaaagagccctctggtcaagaaagagttggtgacg
gagatgattagccacttgtatgagttaaaccagctccctttcgacctcgcacccagagga
tacgacctcgatgcagaatggccatcatacgcacggagggcacttggagcttcagcatca
ccagctcagctctggaaggctccaagtcgtagctccagcattaacagcctagccagcagc
ttttcaccaatgcacatggaggcctatgccaagcacgactctgctttcatgcagccactg
gacacgcccggcaagctggacgccaccgctcacggccacctctacctcgatcatcccgtg
ctccagctgcaccacaacgcggagcagcaggctctggaggagcaggtggagagcttgcag
atccacctggaccaggccgagttgcggctgagacgggagcaggatcgctccgacgctctg
gagggcgagcggcgggacgtgcaggcgacggcgctgctcgccgagcggtccttgctgcag
gcggtggacgacgcacgcagggacaagcgggggctgttgcaggagaacgaggcactccag
ctgaggctgtgcgatctgcaaaagatgctcgacgagagcaagcgggacgtcgccatgctc
gaggggaaagtgtcgagcttggaaaaagacgccgcggcgtgcgagccgcgcgccgatcgc
gctcgggcggagaccgctttcctgcagggcggtgctccgattcaccccgacgttgcggtg
tgcgatcccgaaggtgaagacaatgtcggggcacttgccttgacagcagaggacaggcgt
cagggtgaagtgttggagggtaatcgaagcgactttgacccgatggctcggagtgaaatt
gccaagctacgctgccagcttgaactgtcagagcagcaactgcaatggaggcaagctgac
gtcactcggctgacgacagaggtgggcgagttgcgctcccggcttggcgtttccaaggag
gaggttcagaaactcaagaggagtgcggcggaacaagctctttccagcaaaatgcagagg
caggagttggagagcctcaaagtggatctggtgaatgtaaatagagttcatgttgagcaa
cttctgcagatgaaggaagagcttggggacctcgagaaagagagggagtttttgctgaag
aaaaaatccgattacgagctaaagctgttgtcaaatgaggaggaaaatcttcagctctct
cattgtttggaagagtatgaaaggaagaatttggagtttgaagagcgcttgtataaagct
cacgaagaggctgacgagcttcgttcccaaatttctcaaatagcgtccgaaaaggaccta
ttggtggaaaaaattgattcaacgatttccgaatttacaatgagcgtgcagcaacatgga
caagaatcggaggagttgaagctggaacttgagagactaactggggaaaacacagcattg
atggagcacgtgcagagcctgcagtgtctgaaggaagcaaatgatgacctgcaaactcac
ctggagaagaccaaggagaaaattcacatgctgcaggaatcccaacgtcaagagctgtca
tccatgaagtttaaaatgagtttggaaataatcgatttccagactcgattaaagaaacac
acagaagagaatgagaaattaaaaagtggcaacagcaacaaggatacggtcatttccaat
ttaaatgccaaggtgaagacactaaaggctgattaccagctgcttcaggacctgtcgata
gctcaggaagagaatttcaacgagcagctgcgggagcggctaaagaaagaagaggaagga
attggcctgaggaaggcgctggacaggcaattcggctcctggttctctttcagtggtaac
acgaatttgcaacgaatagacaggtgtaaggaaacgcttgaatctgaacaaaaggatcat
aagaatctcatgaaggagctggccattgtgaagagcagagcggaggaggaagagaagaac
cttctttcagagattcaggagctcaaggagacaatggcaaacatgtcagaccgactcata
gaactgctcaaagacaaggatgtgctgtggcagaagagcgacatgttggagtttgagcaa
cggctgcgtgcagaggagcgctttgagaaggacgttggagcgcagcactgcctcgactgc
aagaacgagttctcctggatgctgcgccgccaccactgccggctgtgcagccgctccttc
tgctactactgctgcaacaactgggcatcgctgaggacgggcgagaagaaggagcgcgtt
tgtcgctcgtgcttcgcgtgccacggcccctccgccctcgggggggggacgcccagtccc
tccgagtcgccctcgacggcgtccaacccactggtctcgccggccggtgaacgacctgca
cctgatgatttaaattttgacatcatcaccgaggaagaggttggtgaaagcagtcaattg
gcatcgccatctgagaatgaggaagcggaaaaagatgtctcaatcgatcgcactgcggaa
gagtcccagcctgcccccttggccttggaaccagagattctacttctcaagaacagcgac
ccttcgtttaacgtgcccctgagtcccgaggatgtgcgttgcttcggcgagtgccggcgc
gagctgcacgtcaaagcgggagcctacgcggtcatcacgatgaacgtgaccgagagcggc
ctcagcctggcctgggagttctcttccgagaaccgcaacgtgtctttcagcgtggtgtgg
cgcgacaggcccgagcagcccgtggagagttccgtggtgctgattccgctgacgcgctgc
aattcgcacctgcagctggttcaaggccagctgaaggcgaggaggcctggcctttatctg
ctgatattcgacaacagcttttcacgattttacgggaagaaggtgtcctaccacttgacg
gtcagcaaaacgctcatgtacgatggcactgacgagacggacccctga
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