Petromyzon marinus (sea lamprey): 116942140
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Entry
116942140 CDS
T09614
Name
(RefSeq) sodium channel protein 1 brain-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmrn04040
]
116942140
Ion channels [BR:
pmrn04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
116942140
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
116942140
NCBI-ProteinID:
XP_032809638
UniProt:
A0AAJ7T1M4
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Position
13:8565728..8604299
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AA seq
1867 aa
AA seq
DB search
MAPFQKGNVPSMGNTIVRPSRRRTAKYQNMDPSQMMAVRQSIRSFNITTRMPSLPAERLL
ELPLRLSLEKPLATSQNGDKSDLLTWLQEKHLITQNDTFLTDGKAEIMHNDQQADGKQQS
YCVITTRFNKPFMYRMSSCRALLMLAPQSHVRWLAVRLMTNQYPPPSSSRARDALQGSWG
TREAGECCRFCSLTARTMFDSFIILTIFVNMIILATNKSYPLADYIFTAIYTGEFLIKTL
ARGFVFHPYSYLRNAWNWLDFIVIILAYMTIAFPFLPGLSALRAFRALKMIAILPALKTI
VGAIFKSAGLLLNVMLLMIFALIIISLFGLQIFRGVLRQKCVFLPNPGTSSLSDAEWSNY
VQNKSNWLITDDIEIMVCGNGTGTSHCPANYTCLPDIGENPNHGATSFDNFGWAMMTSFQ
IITIDYWENCYNMVLRASGQYFIGFFIVVIMLGGYYVVNLVLAVVASSYERELRHHQQLL
DEEKKERAEAERKQRQVVEALMSVNKEAHMHMSTRQSGDLSVDSSISQGLDHLGAGSTLQ
LTRRPRERLVACLNSLRCCSAFVAFRQRLRTLVTSSVFETFITILIITNTVMMAIDYYNA
PYSSALDVGNTVLTTIFIAEAVLKLTALFPRVYFHLGWNIFDFCVVITSVVEWILDSMSN
TNINISIIRTFRILRVFKLAKKWKTLNLLIRVMKSAIGEMRNLTVIFALVIYIFAVIGMQ
LIGRDYYHNRNKFSSGQVPRWNFLDFYSSFLMVFRVLCGEWIEPLYECLVCSNIYYCIPL
FILTYIVGGFLVLNLFLALLLASFGGDNLKARSSGERTAKSASVKHFLTGLKPRRTFHVS
TKPSRFGRRKKEAASRRGEHARLDMDVGTYHNLQRSSVASVQATQDYIYIAPAKPLARLA
RTPTSDDVSAEVRNSWQRLNDLLHSSATAGGTASLKNNSVILDPAKLEGGSVRSSAHSQE
SKLWSEDDSEDESDAESHQAEGSEQRVQVPPCFSASCICCCHRQRRRDSDVERAVGSGGG
DGEGGGRHGEEPSGGEASTGRQGSDGGREGSGSGCCGGCVGAFHAVRRMVFRLCHTTGFN
GLVLFMVIMSSFTLTLDDKYNSSNAQLMQVLRYMDIFYMAFFSMEMFLKMIGLGLHKYFT
SFWTLLDCFLVLEGLSNVAVEFEPLGVCSHQVSWLNQLASAVPALKSLRSLRTLRALRPL
RAISRWKGMRLVVNALVTSIPSISNVMLMCLLFWMVFGIAGVQLFGGKFFRCIDAEGNRL
PATEVANRTVCESLAAEGYLWVNAIINYDNILSAYLALLQVATLEGWIEQMADASDSTGV
DQQPSYNANIYSQMFFIIFVIIGSFFILNLFIGVVIDNFNSVHKRSHKEGALMALLTEDQ
QKFYKTMRRLYRSKPSKSIPQPQNRVLRFFYLLVHRRLFEYISTAVISLNMVMLASEHYK
QSESFTNITKIINLVFTGLFMLEAALKILGNRIHYFRQPWDIFDFFVVCISLTEIVLETM
ASQVNFSPAILRVFRVVRLVRLLRLIRSVEGIRKLIYTLVISLPALINIGLLLLLIMFMY
GVLGVSIFRDLPYSGSITNMVNFETFANSMTLLFRLNTAGGWNDVMGSVLGTKTQNAILV
IAYFTTFVIFSNIIIINMYVAIILENFNEAQEQEETGVTDDDIDMFYRVWGKFDPLATQF
LACEQLPNFFDALKRPFRIPKPNTVKIAALQLAIVEGNKVHCLDVLKTMTRVIFGRVVKT
EHLRQLSRQAQEKVMRRFPLRRIMHVVSTTLALRREEKAAHVIQRAFRHWRGHQAQEPRG
CRTSLRSRRGGGYREGPKGAGADSTGGGGGEGGAGVDFSEVVSCCKVMNGWKVKSFARRR
STVRDAT
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atggctccgttccagaagggtaacgtgcccagcatgggcaacacgatcgtccggccatct
cgcaggaggacggccaagtatcagaacatggatccctctcaaatgatggcagtcaggcag
agcatccgcagcttcaacatcaccacgcggatgccctccttgccagccgagcggctgctg
gagctgccactgcgcctgtccctggagaagccactggccacatctcagaatggagacaag
agtgacctcttgacctggctccaggaaaagcacctcatcactcagaatgacacatttctc
accgatggcaaggccgagattatgcacaacgaccagcaggcagacggaaagcagcaatcg
tactgcgtgatcacgacgcgcttcaacaagcccttcatgtaccgcatgagcagctgccgc
gccctgctcatgctcgctccgcagagccacgtgcgctggctcgccgtgcggctcatgacc
aaccaatatcctcctccttcatcttcacgcgctcgagatgccctacaggggagctgggga
acgagggaggcgggcgagtgctgtcgtttttgttccttgacggcgagaacgatgttcgac
tcattcatcatcctgacgatcttcgtcaacatgatcatcctggcgacgaacaaatcctat
ccgctggccgattacattttcacggcaatctacacgggcgagtttctcatcaagacgctg
gctcggggctttgtcttccacccgtactcttacctgcgcaacgcgtggaactggctcgac
ttcatcgtcatcatcctcgcgtacatgacgatagccttccccttccttccgggcctctca
gctctgcgagccttcagagctctcaagatgatcgccatccttcctgcactgaagacgatc
gtgggggccatcttcaagtcggcggggctgctcctcaacgtgatgctgctcatgatcttc
gcgctcatcatcatctcgctcttcggcctgcagatcttccgcggtgtgctgcgtcagaag
tgcgtattcctgcccaacccgggcacgagctccctctccgatgccgagtggagcaactac
gtgcaaaacaagtcaaactggctgatcacggacgacattgaaatcatggtttgtggaaac
ggcactggcaccagtcactgccccgcaaactacacgtgtttgccagacatcggtgaaaac
ccaaaccatggtgcgaccagcttcgacaactttggctgggcgatgatgacctccttccag
atcatcaccatcgactactgggagaactgctacaatatggtgctgcgagcctctgggcag
tacttcatcggcttcttcattgtggtgatcatgctgggcggctactacgtcgtcaacctc
gtgctggccgtggtggcctcctcgtacgagcgcgagctgcggcaccaccagcagctgctg
gacgaggagaagaaggagcgtgccgaggcggagcgcaagcagagacaggtggtggaggcc
ctcatgagcgtgaataaggaggcgcacatgcacatgtccacccggcaatcaggggacctc
tccgtggactccagcatctcccagggcctcgaccacttgggcgcaggctccaccttacag
ctcaccaggcgccctcgggagagactcgtcgcctgcctgaactcgctccgctgctgctca
gcattcgtggccttccggcagcgcctgcgcaccctggtcacctccagcgtcttcgagacg
ttcatcaccattctcatcatcaccaacaccgtcatgatggccatcgactactacaatgcc
ccctacagcagtgccctcgacgtcgggaatacggtgctgacgaccatattcatagcagag
gcagtactcaagttgacggctctctttccaagggtctacttccacttgggctggaacata
tttgacttctgtgtggtgattacgagcgtggtggagtggattctcgactccatgagcaac
accaacatcaacatctccatcatccgtacattccgcattctgagagtgttcaagctggcg
aagaagtggaagacgctcaacctcctcatccgtgtgatgaagagcgccattggcgagatg
cgaaacctcactgtcatctttgccctggtcatctacatcttcgccgtcatcggcatgcag
ctcatcggccgagactactaccacaaccggaacaaattctccagcgggcaggtccccaga
tggaacttcctggatttctactcctccttcctcatggtgttccgcgtgctgtgcggcgag
tggatcgagccactctacgaatgcctcgtgtgctccaacatctactactgcatccctctc
ttcatcctcacctacatcgtcggtggcttcttggtgctgaaccttttcctcgctctgctg
ctcgcctcgttcggcggggacaacctcaaggcgagatcgagcggcgagcggacggcgaag
tcggcgagcgtgaagcacttcctgacggggctcaagccgcggcgcacgttccacgtctcg
acgaagccctcgcgcttcgggcgcaggaagaaggaggccgcctcgcgtcgcggcgagcac
gctcggctcgacatggacgttggcacctaccataacctgcagcgcagcagcgtggccagc
gtgcaggctacccaggattacatttacatcgctccggcaaagcccttggctcgcctggcg
aggacgcccacgtccgacgatgtgagtgccgaagtgaggaactcctggcagcgtctgaac
gacctcctgcacagttccgccacggcggggggaaccgcgagcctcaaaaacaactctgtc
atccttgacccggccaagctggagggaggctcggtccgcagcagcgcccacagccaagag
tccaagttgtggagcgaggacgactccgaggacgagtccgacgcggaaagccaccaggcc
gagggctcagagcagcgcgtccaggtgccgccgtgtttctccgccagctgcatttgctgc
tgtcaccgccagcgacgtcgcgactccgacgtggagcgagcagtgggcagcggcggcggc
gacggagaaggaggaggtcggcacggggaagagccctcgggtggggaggcgagcacaggg
cggcagggcagcgacggaggccgggagggaagcggttcagggtgctgcggtgggtgcgtg
ggagcgttccacgcggtgaggcgtatggtgtttcgcctctgccatacgacgggcttcaat
gggttagtgctcttcatggtcatcatgagcagcttcacattgacgctggacgacaagtac
aacagcagcaacgcgcagctgatgcaggtgctccgctacatggatatcttctacatggcg
ttcttctccatggaaatgttcctcaagatgataggcctcggcctccacaagtacttcacc
agcttctggactctacttgactgcttcttagtcttggagggattgtccaacgtggccgtt
gagtttgaaccattgggtgtctgctcccaccaggtgtcatggttgaatcagctggcgagt
gcggtgcctgccctcaagtccctgaggtctctgcgcacgctcagggccctgaggcccctc
cgagccatctcccggtggaagggcatgaggttggtggtgaacgctctggtgacctccatc
ccgtccatctccaacgtcatgctgatgtgcctgctcttctggatggtgttcggcatcgcc
ggggtgcagctcttcggagggaagttcttccgctgcatcgacgccgagggcaaccgcctg
ccggccacggaggtcgcgaaccgcacggtgtgcgagagcctcgcggccgagggctacctt
tgggtcaacgccatcatcaactacgacaacatcctctctgcttacctggctctcctgcaa
gtggccacgctcgaagggtggattgaacagatggcggatgcctcggattcgacgggggtc
gatcaacaaccatcttacaatgccaacatctactcccagatgttcttcatcatattcgta
atcatcggatcgttcttcatcctcaacctcttcatcggagttgtcatcgacaactttaac
tccgtgcacaagaggtctcacaaggaaggtgcgctgatggcactcctgacagaagatcag
cagaagttctacaaaaccatgcgacggctgtacaggagcaagccttccaagagcatcccg
caaccccagaatcgtgtcctgaggttcttctacctgctggtgcaccgccggctcttcgag
tacatctccactgccgtcatctccctcaacatggtgatgctcgcttcagagcactacaag
cagagtgaaagcttcaccaacattaccaagatcatcaacctggtattcacgggcctcttc
atgctggaggctgcgctgaagatcctggggaatcgaatccactacttccgccagccgtgg
gacatctttgacttttttgtggtgtgcatctccttaacagagatcgtcctggagaccatg
gcatcacaagttaacttctcgccggcgatcctgcgcgtgttccgcgtggtgcggctcgtc
cgcctgctgcgcctcatccgctccgtggagggaatccgcaagctcatctacacgctcgtc
atctcgctgccagccctcatcaacatcggcctcctcctcctgctcatcatgttcatgtac
ggcgtcctcggagtgagcatcttccgcgatctgccctacagtggctccatcaccaacatg
gtgaacttcgagacattcgccaacagcatgacgctcctattccggctcaacacggccgga
ggctggaacgacgtcatgggctccgtcctgggcaccaagacgcagaacgccatcctcgtc
atcgcgtatttcaccaccttcgtgatctttagcaacatcatcatcataaacatgtacgtg
gccatcatcctggagaacttcaacgaggctcaggagcaagaggagacgggggtgacggac
gacgacatcgacatgttctaccgcgtgtgggggaagttcgatccgttggccacgcagttc
ctggcctgcgagcagctgcccaacttcttcgacgcgctcaagaggcccttccgcatcccc
aagcccaacacggtgaagatcgccgccctgcagctcgccatcgtcgagggcaacaaggtg
cactgcctcgacgtgctcaagacgatgacgcgcgtcatcttcgggcgcgtggtcaagacg
gagcacctgcgccagctcagcaggcaggcgcaggagaaggtgatgcggcgcttcccgctc
cgcaggatcatgcacgtggtgagcaccacgctggcgctgcggcgcgaggagaaggccgcg
cacgtcatccagcgagcgttccgccactggcgcgggcaccaggcgcaggaaccgaggggg
tgccgcacgtccctccgctcgcgccgcgggggcggctaccgcgaaggccccaaaggcgcc
ggcgccgactccaccggaggagggggaggagaaggaggagcgggggttgacttctcggag
gtggtgagctgctgcaaggtgatgaacggctggaaggtgaagagcttcgcgaggcgccga
tccaccgtcagggatgctacgtga
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integrated database retrieval system
