KEGG   Petromyzon marinus (sea lamprey): 116944361
Entry
116944361         CDS       T09614                                 
Name
(RefSeq) clarin-1-like
  KO
K23841  clarin
Organism
pmrn  Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:pmrn03037]
    116944361
Cilium and associated proteins [BR:pmrn03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   116944361
SSDB
Motif
Pfam: Clarin-2
Other DBs
NCBI-GeneID: 116944361
NCBI-ProteinID: XP_032813812
UniProt: A0AAJ7TC00
LinkDB
Position
21:13501911..13513692
AA seq 267 aa
MSAVPPPLSALPTRAPLSSRRRRYRRCALMALSAALALSAALALGAALGAPQWLGARTLC
EAGARIVNASGGPDLDKFRGALSMGLFTGTNVRQCGLGPRPAAITVFPELMRHREGALLA
CVCACLGASCVCALGCAALALYNAMTRPYRILLGTLGIHLTAAATALLAWVAVAMFCGLA
FASDLVEQAANVGEPGVLRVLTEHVWLSDGAWLALAAPCGVALGSFSAHAARSPSTPCCY
CCCSGQRGARGGSGEKPVTQLGDELMY
NT seq 804 nt   +upstreamnt  +downstreamnt
atgtcggccgtgccccccccgctctccgcgctgcccacccgggcccccctctcatctcgc
cgccgccgctaccgccgctgcgcgctcatggcgctgagtgcggcgctggcgctgagcgca
gcgctggcgctgggggccgcgctgggcgccccgcagtggctgggcgcccgcacgctgtgc
gaggccggggcccggatcgtcaacgcctcggggggccccgacctcgacaagttccgcggc
gccctcagcatgggcctcttcaccgggaccaacgtgcggcagtgcggcctcggcccgcgg
cccgccgctatcaccgtattccccgagctgatgcggcaccgcgagggcgcactgctggcg
tgcgtgtgcgcatgcctgggcgcctcatgtgtgtgcgcgctgggctgcgcggcgcttgca
ctctataacgccatgacgaggccctaccgcatcctcttgggcaccctgggcatccacttg
acggccgccgccacagcactgctcgcttgggtggccgtggccatgttctgcggcctggcc
tttgcctcggacctcgtggaacaggcggccaacgtgggcgagcccggtgtgctgcgcgtg
ctcaccgagcatgtgtggctcagcgacggcgcgtggctggcgctggcggcgccctgcggg
gtggcacttggctccttctccgcgcacgctgctcgctctccctcgaccccgtgctgctac
tgttgctgttccgggcagcgcggggcccgtgggggctcaggggagaagccggtgacgcaa
ctcggggatgagctcatgtactga

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