Petromyzon marinus (sea lamprey): 116944361
Help
Entry
116944361 CDS
T09614
Name
(RefSeq) clarin-1-like
KO
K23841
clarin
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmrn03037
]
116944361
Cilium and associated proteins [BR:
pmrn03037
]
Primary cilia and associated proteins
USH complex and associated proteins
116944361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clarin-2
Motif
Other DBs
NCBI-GeneID:
116944361
NCBI-ProteinID:
XP_032813812
UniProt:
A0AAJ7TC00
LinkDB
All DBs
Position
21:13501911..13513692
Genome browser
AA seq
267 aa
AA seq
DB search
MSAVPPPLSALPTRAPLSSRRRRYRRCALMALSAALALSAALALGAALGAPQWLGARTLC
EAGARIVNASGGPDLDKFRGALSMGLFTGTNVRQCGLGPRPAAITVFPELMRHREGALLA
CVCACLGASCVCALGCAALALYNAMTRPYRILLGTLGIHLTAAATALLAWVAVAMFCGLA
FASDLVEQAANVGEPGVLRVLTEHVWLSDGAWLALAAPCGVALGSFSAHAARSPSTPCCY
CCCSGQRGARGGSGEKPVTQLGDELMY
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgtgccccccccgctctccgcgctgcccacccgggcccccctctcatctcgc
cgccgccgctaccgccgctgcgcgctcatggcgctgagtgcggcgctggcgctgagcgca
gcgctggcgctgggggccgcgctgggcgccccgcagtggctgggcgcccgcacgctgtgc
gaggccggggcccggatcgtcaacgcctcggggggccccgacctcgacaagttccgcggc
gccctcagcatgggcctcttcaccgggaccaacgtgcggcagtgcggcctcggcccgcgg
cccgccgctatcaccgtattccccgagctgatgcggcaccgcgagggcgcactgctggcg
tgcgtgtgcgcatgcctgggcgcctcatgtgtgtgcgcgctgggctgcgcggcgcttgca
ctctataacgccatgacgaggccctaccgcatcctcttgggcaccctgggcatccacttg
acggccgccgccacagcactgctcgcttgggtggccgtggccatgttctgcggcctggcc
tttgcctcggacctcgtggaacaggcggccaacgtgggcgagcccggtgtgctgcgcgtg
ctcaccgagcatgtgtggctcagcgacggcgcgtggctggcgctggcggcgccctgcggg
gtggcacttggctccttctccgcgcacgctgctcgctctccctcgaccccgtgctgctac
tgttgctgttccgggcagcgcggggcccgtgggggctcaggggagaagccggtgacgcaa
ctcggggatgagctcatgtactga
DBGET
integrated database retrieval system