Petromyzon marinus (sea lamprey): 116945255
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Entry
116945255 CDS
T09614
Name
(RefSeq) otoferlin-like isoform X1
KO
K19949
otoferlin
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116945255
Membrane trafficking [BR:
pmrn04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116945255
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
116945255
NCBI-ProteinID:
XP_032815493
UniProt:
A0AAJ7TF37
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All DBs
Position
23:7539979..7708630
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AA seq
2018 aa
AA seq
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MALVVHLKRVEKLRGKADRIARVTFRDSPYDTKVFENCEDEARFDSTFRWPLASAINGSE
TLEVRVYNYSKLLSKRLVGTFRMVLQLLVERGHLELTDTLLDDNNASIMATVTLELKYFA
LDSTVGQWNELDFIPTPTEDTENLVPSMETTGDAKSGSHSGVATRFSDIKMSCLSIKSRD
TRRFRMDTNNRNFLLKLGAKKRPPKSSLVLTNLNAEDDENMDIEEMDRKMLAASRGDMLD
NISLASGIVETTNVSNKRSKPEPRVDPTAGKPQSYQVSVMIIEARQLVGLNMDPVVIVEV
GEEKKQTSQKESTNCPYYNEYFVFDFHTPPNMMFDKIIKLSVIHSKNLIRSGTLVGTFKL
DVGTVYSQPDHRFYHKWAVLTDPDDITAGIKGYVNCDIAVVGKGDNIKTPHKSVDNDADS
IEGNLLLPEGIPADRQWARFFVRIYKAEGLPKMNTAIVANVKKALMGQERDLVDPYVQVS
FAGQKGKTSVQRSSYEPVWNEQVVFTELFPPLCRRMKLQIRDSDKVNDTAIGTHFIDLKK
ICNDGDKGFLPTFGPAWVNMYGSTRNYTLMDEHQELNDGLGEGVSFRARLLLGISMEILD
ITSPELSTNTEISVESIPHVADSVAGKMEEFFLFGAFLEATMIDRKISDKLISFEISIGN
YGNSLDGLNKSNILDRSDDEDEYDEGDEDDETELLNDETDDAEMDDDTSGSSTTPSYKPE
TNDRQYFHMPYYEQKPCVYVRSAWHDQRRRLYNSNIIDKIADKLEEGISDVLETMKMERP
HPERRLRGALEEMSVGCSRFLTLANKDPSAFGRTRLDRDRLKICMRELEQMGPQAKSLVK
QVKRANLKERLKTAEGFLQKLRFLADEPQDSIPDIFIWMLVNKTKRVAYARIPAKDILYS
IVEEETGKDCGKVKTLFLRLPGKRVFGSGGWTMQAKLEAYLWLGLNKQRKDFLTGLPSGF
EEKKIGVTGVPPSVLNYHKRSQFELRAHMYQARSLFAADSTGLSDPFARVIFSTHCKSTE
VFQETLCPTWDQLLQFQDVYMYGEPRELRDDPPMVVIEVFDQDTVGKAEFIGRALAKPVV
KISTEPYEPPRFPPMLDYYQIYRGPVTAGELLASFELLQVPPADNCKFPPVSGLNDTDRG
PIIPVPKGIRPVLAKYRIEVLFWGLRDLKRVQLQSVDRPRVDIECAGKGIQSVVIADFNK
NPNFSHLVKFFEVDLPENELFHPPLNIRVVDCRAFGRYILVGSQTVTSLRKFIFHTTGPD
MGRQGSTKPRFLAKRFAVLRVKQATSDAEIIKQIVETNAADSDKKTETTITIEGGEPGAT
QGKKSKKKKTEPEDAERDESVLDWWSKYFASIEMLQESRLQTPGEDAVEGATAEPVQGAE
SPRKALQFHKAADKDKQLKKKPHLQVEELKHRMNPELLKHCLMVMKSAGLLMVYDKELEA
EFDNFEDWLHTFNLYRGKTSDEDDILDEERVVGRFKGSTCVYKWPLADNVLKEVGYDAQF
GMFQGIPTNDPINVLVRVYIVRATDLHPADINGKADPYIVIKLGKTEVKDNENYISKQLN
PIFGKSFDIEATFPMESMLTVQVMDWDLVGMDDLIGETKIDLESRYYSRHRATCGIAQQY
AVHGYNTWRDPMKPTQILAKLCKDNKVDGPHYGPGGRVKVANRIFNGPTEMEDDSGHKKQ
TEEHLALKVLHSWEEIARVGCKLVPEHVETRPLLHPDKTGIEQGRLEMWVDMFPKDMPHP
GPPVDISPRKPKSYELRIIIWNTDEVILEDDAFMTGEKMSDIYVRGWLKGQQEDKQDTDV
HYHSLTGEGNFNWRFIYPFDYLVAEEKIVISKKESLFSWDETEYKIPARLTLQVWDADHF
SADDFLGAIELDLNRFPRGAKSSKQCTLNMLKMDGSVPMISIFKLKRVKGWWPFVSRDEN
DEQELTGKVEAELHLLTAEEAEKNPAGLGRNEPDPLEKPNRPKTSISWLTNPFKSLFLVI
WKNYKWYIITALVLLVFALFIALLLYTLPGAITNNYLG
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atggctctcgtggtccatctgaagcgggtggagaagcttcggggcaaagcggaccggatt
gcccgggtgacgttccgagactcgccctacgacaccaaggtgttcgagaactgcgaagat
gaagcacgcttcgactcgacctttcgctggccgctggctagcgcaatcaatggaagtgaa
accttggaagtccgagtttacaattacagtaagctgctctctaaaaggctggtgggcacc
ttccgtatggtgctgcagctgctggtggagcgtggacacctggagctgacggacacgctc
ctcgatgacaacaacgcctcgatcatggccacggtcacgctggaactcaagtactttgcg
ctcgacagcacggtcggccagtggaacgagttggactttatcccaacccccacagaggac
acagagaatctcgtgccaagcatggagaccactggagatgcaaaaagcggctcgcacagt
ggggtggccaccaggttcagcgatattaagatgtcctgccttagcatcaaatctagggac
accagaagatttcgcatggacacgaacaacaggaattttctactgaaacttggagcgaag
aaacggccaccgaaatccagcttggtgcttacgaacctcaacgcagaagatgacgagaat
atggacatagaggaaatggacaggaagatgttggcggcaagcaggggcgacatgctggac
aacatctccctcgcttctggaattgtcgagaccaccaatgtttccaacaaaagatcgaaa
ccggagccgagggtcgatccgactgcgggcaagcctcagagctaccaggtgagcgtgatg
atcatcgaggcccgacagctggtgggcctcaacatggacccggttgtgattgtggaggtc
ggggaagagaagaaacagacgagccagaaggagtccacgaactgcccctactacaacgag
tattttgtgtttgacttccacacgcctcccaacatgatgtttgacaagatcataaagctc
tcggtgatccactcaaagaacttaatccgaagtggaactcttgtgggcaccttcaaatta
gacgtcggtacagtctacagtcagcctgaccaccgcttctaccacaagtgggccgtgctc
accgacccagacgacatcacggccggcatcaagggctacgtgaactgcgacatcgccgtg
gtggggaagggcgacaacatcaagacgccgcacaagtccgtcgacaacgacgccgactcc
attgaagggaatctgctgcttccggaaggcatcccggcagatcggcagtgggcccgtttc
ttcgtgaggatctacaaggccgagggcctgcccaagatgaacaccgccatcgtggccaac
gtgaagaaggccctcatgggccaggagagggatctcgtcgacccctacgtgcaagtctcc
ttcgccggacagaagggcaagacgtccgtgcagcggagcagctacgagccggtgtggaac
gagcaggtggtgttcaccgagctcttcccccctctctgccgccgcatgaagctacaaatc
cgcgacagtgacaaagtcaacgacacggccatcggcactcacttcatcgacctcaagaag
atttgcaacgacggggataaaggatttctgccgacgttcggcccggcatgggtcaacatg
tacggctcgacgcggaactacacgctcatggacgagcaccaggagctgaatgacggcctc
ggggagggcgtgtcgttccgcgcccgcctcctcttgggcatctccatggaaatcctggac
atcacgtctccggagttgagcaccaacaccgagatctcggtggagtccatccctcacgtc
gccgactctgtagctggaaagatggaagagttttttttgttcggagctttcctggaggcc
acgatgattgacaggaagatcagtgacaagctgatcagctttgaaatcagcattgggaat
tacggaaacagcttggatgggctgaacaagtcaaatattcttgaccgcagcgatgacgag
gacgaatacgacgagggggatgaggatgacgagactgagctgctgaatgatgagacggat
gatgcagaaatggatgacgacacgtctgggtcctccactaccccttcctataagccggag
actaatgacaggcagtacttccacatgccttactacgagcagaagccgtgcgtgtacgtg
cggagcgcgtggcacgaccagcgacggcgtctctacaactccaacatcatcgacaagatc
gccgacaagctggaggagggcatcagcgatgtcttggagacgatgaagatggagaggcca
cacccagagcggaggctgcgaggagccttggaggaaatgagcgtgggttgcagccgattc
cttacccttgccaacaaagatccatctgcattcgggcgcacgagattggaccgggaccgt
ctcaagatatgcatgagggagcttgaacagatgggcccgcaggcaaagagcctggtgaag
caggtgaagcgggccaacctcaaggagcggctcaagacggccgagggcttcctgcagaag
ctccggttcctcgccgacgagccccaggacagcatcccggacattttcatctggatgctg
gtcaacaagacgaagcgcgtcgcgtacgcgcgcatccccgccaaagatatcctctattcc
atcgtagaggaggagacggggaaggactgcggtaaagtcaaaacgcttttccttaggctg
ccggggaaacgtgtcttcggctcgggcggttggaccatgcaggccaagctggaggcctac
ctctggctgggcctcaacaagcaacgcaaggacttcctcactggtctgcccagcggcttt
gaggagaagaaaattggggtcaccggtgttccgccgagcgtcctcaactaccacaagagg
tcgcagttcgagctgcgcgcgcacatgtaccaggctcgcagcctcttcgccgccgacagc
acggggctctccgaccccttcgcccgagtcatcttctccacccactgcaagtccaccgag
gtcttccaggagacgctctgcccaacgtgggaccagctgctgcagttccaggatgtctac
atgtacggggagccacgcgagctgagagacgacccccccatggtcgtgatcgaggtgttc
gaccaagacaccgtgggcaaagccgagttcattggacgagcactggccaagccggtggtg
aaaatcagcacggagccgtacgaacccccgcgcttccctccaatgctcgactactaccag
atctaccgaggcccggtcactgccggagagctgctggcatcgtttgagctcctgcaggtc
ccaccagcagacaactgtaaattccctccagtctccggactgaacgacacagaccgaggg
cccatcatcccggtgcccaaggggattcggcctgtcctggccaagtacaggatagaggtt
ctcttctggggcctgagggatctcaagcgagtgcagctgcagtcggtggatcgaccacgc
gttgacattgagtgtgcgggcaagggcatccagtcggtggtgatcgccgacttcaataaa
aaccccaacttcagccaccttgtcaagttctttgaagtggatctgccagagaacgagttg
ttccacccgccactcaacatccgagtggtggactgtcgcgcgttcggacgctacatactc
gtgggctcgcaaacggtcacctccctgcgcaagttcattttccacaccacggggccagac
atgggccgccaaggcagcactaagcctcgattcctggctaaacggtttgctgtccttcga
gtgaagcaggcgaccagcgatgctgagattatcaagcaaatcgtggagacgaacgcggca
gactccgacaagaaaacagagacgacaatcaccatcgagggcggagagccgggggccacc
cagggcaagaagagtaaaaaaaagaagacggagccagaggatgcagagcgtgacgagagc
gtgctggactggtggtccaagtactttgcctccattgagatgctccaagagagtcggttg
cagactccaggtgaagatgcagtggagggagccactgcagagccagtccagggcgcagag
tccccaagaaaggccctgcagttccacaaagcggccgacaaggacaaacagctgaagaag
aaacctcaccttcaagtggaagagttgaagcatcggatgaacccagaactgctgaagcac
tgtttgatggttatgaagtctgctggactgttgatggtttatgacaaggagctggaggca
gagtttgacaactttgaggactggctacacacattcaatctgtatcgtggcaagaccagc
gatgaagatgacattttggatgaggagagggtggtgggacgtttcaagggctcgacctgc
gtgtacaagtggcccctcgcggacaacgtgctgaaggaggtggggtacgacgcccagttt
gggatgttccagggcatccccacgaacgaccccatcaacgtgctcgtgagggtctacatc
gtgcgggccactgacctccatccggctgacatcaatgggaaggcggatccgtacattgtg
atcaagctgggcaagaccgaggtgaaggacaatgaaaactacatctccaagcagctgaac
cccatctttggaaagtcttttgacatcgaagccaccttccccatggagtcgatgctcact
gtgcaggtcatggattgggacctggtgggcatggatgacctcattggagagacgaagatt
gaccttgagagccgctactacagccggcaccgtgccacgtgcgggatcgcacagcagtac
gctgttcacggctacaacacgtggcgcgaccccatgaagccgacacagatcctggccaag
ttgtgcaaagacaacaaggtggatgggccgcactacgggccgggtggccgtgtcaaggtg
gccaaccgcatcttcaatggacccactgagatggaagatgatagcggtcacaagaagcag
acggaggagcacctggcactgaaggtcctgcacagctgggaggagattgcccgtgtgggc
tgcaagctggtaccggagcacgtggagacacggcctctactgcaccccgacaagactggc
attgagcagggtcgtctggaaatgtgggtggacatgtttccgaaggacatgccgcaccca
gggccacccgtggacatctctccacgcaaacccaagagctatgagctgcgtataatcatt
tggaacaccgacgaggtgattttggaagacgatgctttcatgacgggagagaagatgtcg
gatatctacgtgcgaggctggctcaaggggcagcaggaggacaaacaggacacggacgtg
cactaccactcgctcacgggcgagggcaacttcaactggcgcttcatctaccccttcgac
tacctggtggctgaggagaagatcgtcatctccaagaaggagtccctcttctcgtgggac
gagactgagtacaagatcccggctcgcctcaccctgcaggtgtgggacgccgaccacttc
tccgccgacgactttcttggtgccattgagttggacctcaaccgcttcccacgaggggcc
aagtcctccaagcagtgcacgttgaacatgctcaagatggacggctcggtgcccatgatc
tccatcttcaagctcaaacgggtcaagggctggtggccttttgtctcccgcgacgagaac
gacgaacaggagctcacggggaaggtggaggccgagctgcatctgctgacggctgaggag
gcggagaagaacccagcagggctgggccgcaacgagccggaccccctcgagaagcctaat
cgccccaaaacttctatctcgtggctgacaaatccattcaagtccctgttcctcgtcatc
tggaaaaactacaagtggtacatcatcaccgccctcgtcctcctcgtcttcgccctcttc
atcgccctgcttctctacactttgccaggagccatcacaaacaactacttaggatag
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integrated database retrieval system
