Petromyzon marinus (sea lamprey): 116945680 Help Entry 116945680         CDS       T09614                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism pmrn  Petromyzon marinus (sea lamprey) Pathway pmrn04010   MAPK signaling pathway pmrn04120   Ubiquitin mediated proteolysis pmrn04140   Autophagy - animal pmrn04144   Endocytosis pmrn04620   Toll-like receptor signaling pathway pmrn04621   NOD-like receptor signaling pathway pmrn04622   RIG-I-like receptor signaling pathway pmrn05132   Salmonella infection pmrn05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:pmrn00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     116945680 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     116945680 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     116945680 (TRAF6)    04140 Autophagy - animal     116945680 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     116945680 (TRAF6)    04621 NOD-like receptor signaling pathway     116945680 (TRAF6)    04622 RIG-I-like receptor signaling pathway     116945680 (TRAF6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     116945680 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     116945680 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pmrn04131]     116945680 (TRAF6)    04121 Ubiquitin system [BR:pmrn04121]     116945680 (TRAF6) Enzymes [BR:pmrn01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      116945680 (TRAF6) Membrane trafficking [BR:pmrn04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     116945680 (TRAF6) Ubiquitin system [BR:pmrn04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     116945680 (TRAF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_4 zf-RING_2 TRAF3_RING U-box zf-RING_5 RING_XB3-XBAT31 ATG16 HTH_DeoR zf-TRAF_2 SlyX Motif Other DBs NCBI-GeneID:  116945680 NCBI-ProteinID:  XP_032816114 UniProt:  A0AAJ7TE10 LinkDB All DBs Position 24:complement(13975597..13987716) Genome browser AA seq 594 aa AA seqDB search MSCGSGREVDNEACCSARGLRTPGDTTDYSESGLSFHSVSGDDSATEAQGYEADFEPPLE SKYECPICLMALREPVQTPCGHRFCRACILHSMRDAGPKCPVDNAVLHEGQLFPDNFAKR EILSLTVRCPNKPCGHRGELRALQEHQLRCEYAQVPCVRCEMPVCRRDLAKHEEQECMRR IVTCLHCCEKMAYKDSKNHEQMCPLVVVNCKHCQQELIREQLGPHLEVDCQQAQVPCTFS PLGCEAQMVRSLLAAHMHEHTQVHMRLLANGLKILRIQVGQGAQPSSAAGSSAPPNSLSW LSSTSGGDVQTAGASRSQGSRDRAACDCAQELDRLREITRTLEERVVLQLHQIRELSAKT DNQQGLLAEATRLVRSLEARVAESESRLCAGIFTWRVERFSRLLPGGLASGFASDGMHPD APAVMHSSGFYTGVPGYRLCLRLQVLSGREVPAGAASPSVLLAGRQPHLALFVHLLQGDY DHRLPWPFKGRIRISVVDQCERDSVHVTEMMDADPQLSAFQRPSVHRNPKGFGYMNFMDI NTLHHRSYLRDDCLVVRCEVVTTLGPGGLQQQGLLLEDPPRPPNQPENVPHSMG NT seq 1785 nt NT seq  +upstreamnt  +downstreamnt atgagctgtggcagtggtcgcgaagtggacaatgaggcatgctgcagcgcacgggggttg cgcacgccaggagacacaaccgattattcagagagcggcctctccttccattcggtgtct ggcgatgactcggccaccgaggctcaaggctacgaggctgactttgagccgccccttgag agcaagtacgagtgccccatctgcctgatggcactgagggagcccgtgcagactccctgc ggacaccgcttctgcagagcatgcatcctgcactccatgagggacgccggtcccaagtgc cccgtggataacgccgtgctccatgagggacaactcttccccgataactttgccaagcgc gagatcctatcgctcaccgtgcgatgtcccaacaagccatgtggtcaccgcggcgagctg cgtgccctacaggaacaccagttgcgttgtgagtacgcgcaggtgccatgtgtgcgctgt gagatgcctgtgtgccggcgggacctggcaaagcatgaggagcaggagtgcatgagacgc attgtcacttgtctccactgctgtgagaagatggcatacaaagactcaaagaaccatgaa cagatgtgtccactcgtcgtggtgaattgcaaacactgccaacaggagctgatccgggaa cagctggggccgcatctggaggtcgactgtcagcaagcccaggtgccctgcaccttcagc ccgctcggctgtgaggctcagatggtgcggtcgctgctggccgctcacatgcatgagcac acgcaggtgcacatgcgtctcctggccaatggccttaagatcctgcgtatccaggttggc cagggtgcccaaccgtcctcggcggccgggtcctctgctccgcctaacagcctctcttgg ctcagcagcacgagcggcggggacgtccagactgccggcgccagtcggagccagggttcg cgcgaccgcgccgcatgcgactgcgctcaggagctggaccggctgcgcgaaatcacgcgg acgttagaggagcgcgtcgtcctgcagctgcaccagatccgggagctgagcgccaagacg gacaaccagcagggcttgcttgccgaggccacgcgcctcgtgcgctcactggaggctcgc gtggccgagtccgagtcgcgcctgtgcgcgggcatcttcacgtggcgcgtggagaggttc tcacgactcctccctgggggcctcgcttccggctttgcttccgacggaatgcacccagac gctccggctgtcatgcacagctcgggattctacacgggagtccccggctaccgcctgtgc cttcgcctgcaggtgctgagcggccgcgaggttccggcgggcgcggcttctcccagcgtg ctgctcgccgggcgccaacctcatctggccttgtttgttcacctgctgcaaggcgactat gaccaccgcctgccatggcccttcaaaggtcgcatccgcatctcggtggtggaccagtgt gagcgcgatagcgtgcacgtgacagaaatgatggatgccgatccgcagctgagtgccttc cagcgcccctccgtgcaccgcaaccccaagggttttggctacatgaatttcatggatatc aacaccctgcaccaccgctcttacctgcgcgatgactgcctagtggtgcgctgtgaggtg gtgacgacgctgggtccgggagggttgcagcagcaaggcctactgctcgaggacccccca cggcccccaaatcagcccgagaatgttccacattccatgggatga

DBGET integrated database retrieval system