Petromyzon marinus (sea lamprey): 116945932
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Entry
116945932 CDS
T09614
Symbol
DSEL
Name
(RefSeq) dermatan-sulfate epimerase-like protein
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pmrn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
116945932 (DSEL)
Enzymes [BR:
pmrn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
116945932 (DSEL)
BRITE hierarchy
Motif
Pfam:
Sulfotransfer_3
Sulfotransfer_1
YCII
DUF4962
Motif
Other DBs
NCBI-GeneID:
116945932
NCBI-ProteinID:
XP_032816518
EnsemblRapid:
ENSPMAG00000046542
LinkDB
All DBs
Position
25:complement(8393152..8400381)
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AA seq
1259 aa
AA seq
DB search
MAVCLGSLTGGQLGLALILCCCCCISTAEGRLPHPLLYFGPGDARVLQQQAHTTHAHLAK
VIRNSVKSMMSKATFYLPPVEHEAFAARWNEIYGNNLGALAIYCVLFPGDETALKFTLEY
MDRMCSYPRWQVRDAPQDEVPVAHSLVGFATAFDFLYPRVDARRRAAHLAKIRAVTEEMY
ELSKFRAWGKHYLHNHEVTNVMALLTGALVVEAHDRAAAAPWRQAATELMERTLFLLDHV
VDGSLDEGVAYGSYTSRSVTQYIFLALRHFGINHTNSTWLREHFWFYYATSLPGYQRTVG
IADSNYNWFYGPESQLVFLDRYVLRNGSGNWLAQQIRRSRPRDGPMEHSTSQRWCTLHTE
YLWYDAQLVPRPPADHAAPRMHVFSNWGVVTYGGGLPRAPGNTFVSFKSGKMGGRAVFDI
VHSGAYSWINGWKNFNPGHEHPDQNSFTFAPNGQAFVAEALYGPKHTYLNNALVFGPSPT
SQCNQPWEGQLGECFQWLKWTGEGVGDTAGEVITASQHGELMFTSGEAASAYSASMGLKS
VYRSLLLLNSQTLLVVDHIERSETSPVSQASAFFHNMELDFKYVLQRVRDRYNGAVMDVW
DAKYEMFWFDSQGNSPRAALQDMEQAAEFKKRWTQFVNVTFALRGPPTATRVAYVFHGPF
VALGDCRFVDEHRNGVRLHLEVNGTSQLVSIATRYQDPAARLAYLGFAGYAKLENERQIT
RFGLSQVVLREQGGESDLAYLMGVTVSFAVGITLGTALVLMAVRWKFYISFNRLVRLAML
GVVLLWVVELLVVWRACVHPFCGLGWERRRPPIATGNYGDGQRPLPEPDLHSVLPTVVVA
SLPASGAEILKELFAGTTDFAYIAAPTHLVRLPDTEFEVDPFVDACEWTYADVRSGRFPT
LQGWFQSLLRNPRLHLQNMPLHGLLPKRRVLSHESGVSLGGTALPGEAYFTPLVLNKTNG
QGAPGGSTDLIERLTRDALPTVSLRSRKLLRKKQPSKTLRRAKAKQEPEPLLQKRVLSDE
ESEAEYIRGLRAHLLAYPNTRIALHLTSGSWNLKLPFLRGLVGSSLRALHVVRDPRAWVH
SMLYGSKPSHYAELDVAARLERLFQAAGAGRAPRREPCGLGSGYAFEFEPLRRLVSDADA
TPVALLAHVWLASTAAALRVNRQLPATNCAVVRFEELVQQPQAASERIYAFLGLPAPPAA
INRILMATRSQVFRLPNEGPLSASAVSAWKAKMPRRDIREIEDICASMMTQLGYSKFME
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtgcctgggctccctgacgggggggcagctcggcttggcgctgatcctgtgc
tgctgctgctgcatctcgacagccgaggggcggctcccacacccgctgctctacttcggc
ccgggcgacgcgcgcgtgctgcagcagcaggcgcacaccacgcacgcgcacctcgccaag
gtgatccgcaactcggtcaagagcatgatgtccaaggccaccttctatctgccgcccgtc
gagcacgaggcgttcgcggcgcgctggaacgagatctacggcaacaacctgggcgccctc
gccatctactgcgtcctcttcccgggcgacgagacggcgctcaagttcacgctggagtac
atggaccgcatgtgcagctacccgcgctggcaggtgcgcgacgcgccgcaggacgaggtg
cccgtcgcacactcgctcgtcggcttcgccaccgccttcgacttcctgtacccgcgcgtg
gacgcgcggcggagggccgcgcacctcgccaagatccgcgccgtcaccgaggagatgtac
gagctgtccaagttccgcgcgtggggcaagcactacctgcacaaccacgaggtgaccaac
gtgatggcgctgctcacgggcgccctggtcgtggaggcgcacgaccgggcggcggcggcg
ccctggcggcaagcggccacggagctgatggagaggaccttgttcctgctggaccacgtg
gtggacggctctctggacgaaggggtcgcctacggcagctacacgtcccgctcggtgacg
cagtacatcttcctggcgctgcggcactttggcattaaccacaccaacagcacgtggctg
cgcgagcacttctggttctactacgccacgtcgctgcccggctaccagcggacggtgggc
atcgccgactccaactacaactggttctacgggccggagagccagctggtgttcctcgac
aggtacgtgctgcgcaacgggagcggcaactggctcgcgcagcagatccggcggagcaga
cccagggacggccccatggagcactcgacgtcgcagcgctggtgcacgctgcacaccgag
tacctgtggtacgacgcgcagctggtgcccagaccgcccgccgaccacgccgcgcccagg
atgcacgtcttctccaactggggagtggtgacgtacggcggcgggctgcccagagccccc
ggcaacacgttcgtgtctttcaagtcggggaagatgggcgggcgcgcggtgttcgacatc
gtgcacagcggcgcctactcgtggatcaacggctggaagaacttcaaccccgggcacgag
caccccgaccagaactcattcaccttcgcgcccaacggccaggcgttcgtggccgaggcg
ctgtacggccccaagcacacgtatcttaacaacgcgctggtgttcgggccgtcgcccacc
agccagtgcaaccagccctgggagggccagctgggcgagtgcttccagtggctcaagtgg
acgggcgagggtgtgggcgacacggcgggagaggtgatcacggcgtcgcagcacggcgag
ctgatgttcaccagcggcgaggccgcgtcggcctactcggcctccatgggtctcaagagc
gtctacagaagcctgctgctgctcaactcgcagacgctgctggtggtcgaccacatcgag
cgctcggagacctcgcccgtcagccaggcgagcgccttcttccacaacatggagctcgac
ttcaagtacgtgctgcagagggtcagggacaggtacaacggcgccgtgatggacgtgtgg
gacgcaaagtacgagatgttttggttcgacagccaggggaatagtccccgcgccgccctg
caggacatggagcaggcggcggagttcaagaaacgctggacgcagttcgtcaacgtgacg
ttcgcgctgagagggccgccgacggcaacgcgcgtggcgtacgtgttccacgggccgttc
gtcgcgctcggcgactgccgcttcgtggacgagcacaggaacggcgtgcgcctgcacctg
gaggtcaacggcacgtcgcagctcgtgtcgatcgcgacgcggtaccaggacccggccgca
cgcctcgcctacctgggcttcgcggggtacgccaagctggagaacgagcggcagataacg
cgcttcggcctgagccaggtggtgctgcgtgagcaggggggcgagagcgacctggcgtac
ctgatgggcgtcacggtgagcttcgccgttggcatcacgctcggcacggcattggtgctc
atggccgtgcgctggaagttctacatctcctttaaccggctcgtgcggctggcgatgctc
ggcgtggttctgctgtgggtcgtcgagctgctggtggtgtggcgggcctgcgtgcacccc
ttctgcggcctcggctgggagcgccgtcgcccgccgatcgcgacggggaactacggcgac
ggccagcggcccctgccggagcccgacctccactcggtcctgcccaccgtcgtggtcgca
tcgctgccggcgtccggcgccgagatcctcaaagagctgttcgccggcaccacggacttt
gcttatatcgcggcgcccacacacctggtgaggctgcccgacacggagttcgaggtggac
ccgttcgtggacgcgtgcgagtggacctacgcggacgtgcgttcggggcgcttccccacg
ctgcagggctggttccagtccctgcttaggaacccgcggcttcacctgcagaatatgccc
ctgcatgggctgctgccaaagaggcgggtgttatcgcatgagagtggtgtgtcgttaggt
ggtacggctctgccgggagaggcctattttacaccacttgtgctcaacaaaactaacggg
caaggggcaccaggtgggagcactgatttgattgagaggctcacacgagacgcgcttccc
actgtatccctgagatcgcgaaagttgctgcgtaaaaaacagcccagcaaaactctccgg
cgagcaaaagccaagcaggagccagagcccctcctccaaaagagggtcctctcggatgaa
gagagcgaagcagaatacatccggggtctacgagctcacctgctggcctaccccaacaca
cgcatcgccctgcacctgacgagcggcagttggaacctgaagctccccttcctgcggggc
ctcgtgggctcgtccctgcgcgcgctgcacgtggtgcgcgatccgcgcgcttgggtccac
tccatgctgtacggcagcaagccgagccactacgccgagctggacgttgccgcgcggctc
gagcgcctcttccaggccgccggcgccgggcgcgcgccgaggcgcgagccctgcggcctg
gggtctggctacgcgttcgaattcgagccgctgcgccggctggtgtcggacgcggatgcc
actccggtggcgctgctcgcgcacgtctggctcgccagcacggcggcggcgctgcgcgtc
aaccgccagctgccggcgacgaactgcgcggtggtgcgattcgaggagctggtgcagcag
ccgcaggcggcctcggagaggatatacgcgttcctgggactgcccgcgccgcccgccgcg
atcaaccgcatcctgatggccacgcgcagccaggtgtttcgcctgcctaatgagggcccg
ctctcggccagcgcggtgagcgcgtggaaggcgaagatgccgcgcagggacatccgtgag
attgaggacatctgcgcgtcgatgatgacgcagctgggatactcgaaattcatggagtga
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