Petromyzon marinus (sea lamprey): 116946880
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Entry
116946880 CDS
T09614
Name
(RefSeq) beta-1,4 N-acetylgalactosaminyltransferase 1-like isoform X1
KO
K00725
(N-Acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase [EC:
2.4.1.92
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn00600
Sphingolipid metabolism
pmrn00604
Glycosphingolipid biosynthesis - ganglio series
pmrn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
116946880
09107 Glycan biosynthesis and metabolism
00604 Glycosphingolipid biosynthesis - ganglio series
116946880
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pmrn01003
]
116946880
Enzymes [BR:
pmrn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.92 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase
116946880
Glycosyltransferases [BR:
pmrn01003
]
Glycan extension
Glycolipid
116946880
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
FKRP_N
Glyco_tranf_2_5
Motif
Other DBs
NCBI-GeneID:
116946880
NCBI-ProteinID:
XP_032818009
UniProt:
A0AAJ7TIH2
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Position
2:12044054..12081048
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AA seq
580 aa
AA seq
DB search
MGETDMKERVTLTTSVGVCAALQEQLCSCRWSCGSLWNLSLVRKMRLSRRVLFTATLAGL
LLYFSPNLHTLWGSRRQLGRPVDVGLASEHDVTSNSAHMSSIAAVLPQLTELHIPYRIKS
EMLTLLPSNTCTCESSAPLLPVPGLDRLLPHKQVQQLEAAFEVPLLKDTSRRRQREYLTF
MLRHALPVKKVLVAEPNSPLSYPTQGLQVPPLQTILIPGLGLHNGDKEMKKVTLSAKLGV
LDTVAEVGEVMAEGLGESRLSLSSSHLENLNLQLRTVTYTNTVYQPGTSEMVQMESGKHR
AEIPIVVAHQSLPWLYDPGPDGNISNLVTVVTKTFLRYDKLKGLIASIRRFYPDITIIVA
DDSEHIEMLREPGVEQYIMPYGKGWFAGRNLAISQVSTKYLLWVDDDFLFSENTKLERMV
EVLEKTSLDVVGGAVREVTGFQTTFQHKLEVQAGGPDGYCLHQHRGYYHPLAGLPNCVLT
DGVVNFFMAHTRNVRRVGFDPQLNRVAHTEFFIDGLGELRVGSCSDISVNHASKIKLPWT
RGDSDRKYNEFRYASDADGVLKRMLRSLYFKNRLKCYSKD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagacggacatgaaggagcgagttactctgacgacgtcggttggggtctgcgcg
gccctgcaggagcagctctgctcatgccggtggtcctgtgggagcttgtggaacttatca
cttgtgcgtaagatgcgcctgtctcggcgcgtgctcttcacggccacgctggccgggctg
ctgctctacttcagtccgaacctgcacacgctgtggggcagccgcaggcagctcggacgg
cccgtagacgtgggcttggcgagcgaacacgacgtgacgagcaacagcgcccacatgtct
agcatcgcggctgtcctgcctcaactgactgagctgcacattccctaccggataaagtcg
gaaatgctgacgttactgcccagcaacacgtgcacatgcgagagctccgcaccgctgctg
cccgtgccgggtctcgaccgcctcctgccccacaagcaggtccagcagctggaggcggcg
ttcgaggtgccactgttgaaggacacaagccggcgccggcagcgggagtacttgaccttc
atgctcaggcacgcactccccgtgaagaaggtgctggtggcagagcccaactcgccactt
tcctacccgacccaggggctgcaggtgccgccactgcagactatcctcataccgggatta
ggactacataatggtgacaaagaaatgaaaaaggtgacgctgtccgcgaagctgggggtg
ctggacacagtggcggaggtgggagaggtgatggcagaagggctgggcgagtcacgcctc
tccctgagcagctcccacctggagaacctcaacctgcagctgcgcacagtcacgtacacc
aacacggtgtaccagccgggcacctccgagatggtgcagatggagagcgggaaacacaga
gctgagataccgatcgttgtagcgcaccagagcttgccctggctctacgaccctggtcct
gatggaaatatcagcaacctcgtgacggtggtaaccaagacgttcttgcgctacgacaag
ctgaaggggctcattgccagcatcaggagattctacccggacatcaccatcatcgtggcg
gatgactctgagcacatcgagatgctccgcgaaccgggtgtggagcagtacatcatgcct
tatgggaagggttggtttgctggcaggaaccttgccatttcccaggtgagcaccaagtac
ctgctgtgggtggatgatgacttcctcttctcggagaacacgaagctggagcgcatggtg
gaggtgctggagaagacttccctggacgtggttggaggagcagtgcgggaggtgaccggc
ttccagaccacgttccagcacaagctggaggtgcaagcaggaggacccgatgggtactgt
ctgcaccagcaccgtggttactaccacccgctggccggcttacccaactgcgtgctcacg
gacggagtggtgaacttcttcatggcgcacacgagaaacgtgcgccgggttggattcgac
cctcaactcaaccgcgtggctcacacagagtttttcatcgacgggctgggtgagcttcgc
gtgggctcatgcagcgacatttcggtgaatcacgcttccaaaatcaagctgccttggact
cggggggacagcgaccgcaagtacaacgagttccgctatgctagcgacgcagacggagtc
ctcaagcgaatgctccgctccctttacttcaagaaccgcctgaagtgctacagcaaggat
taa
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