KEGG   Petromyzon marinus (sea lamprey): 116947258
Entry
116947258         CDS       T09614                                 
Name
(RefSeq) transcription factor p65-like isoform X1
  KO
K04735  transcription factor p65
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn04010  MAPK signaling pathway
pmrn04137  Mitophagy - animal
pmrn04210  Apoptosis
pmrn04218  Cellular senescence
pmrn04620  Toll-like receptor signaling pathway
pmrn04621  NOD-like receptor signaling pathway
pmrn04622  RIG-I-like receptor signaling pathway
pmrn04623  Cytosolic DNA-sensing pathway
pmrn04625  C-type lectin receptor signaling pathway
pmrn04920  Adipocytokine signaling pathway
pmrn05132  Salmonella infection
pmrn05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    116947258
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    116947258
  09143 Cell growth and death
   04210 Apoptosis
    116947258
   04218 Cellular senescence
    116947258
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    116947258
   04621 NOD-like receptor signaling pathway
    116947258
   04622 RIG-I-like receptor signaling pathway
    116947258
   04623 Cytosolic DNA-sensing pathway
    116947258
   04625 C-type lectin receptor signaling pathway
    116947258
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    116947258
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    116947258
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    116947258
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pmrn03000]
    116947258
Transcription factors [BR:pmrn03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    116947258
SSDB
Motif
Pfam: RHD_DNA_bind RHD_dimer
Other DBs
NCBI-GeneID: 116947258
NCBI-ProteinID: XP_032818672
UniProt: A0AAJ7TLD7
LinkDB
Position
29:complement(6236205..6271754)
AA seq 519 aa
MAGRGPAAPFLEVVEQPEARGMRFRYPSEGACAGSLLGASTTDRDKTYPSVRLVNLTGKA
EVQVCLVTRDAPHRPHPYSLVGRDCEDGIFKQLVVQGCSTVQLINVGIQCVKKSMVQRSA
EDKIRKINPFKVSDRVVVRPEEMDLTAVRLCFQAKLLPSNQILTPVLSEIIFDKKATCAS
QLKITRMNKTYGSVHGGDEVMLFCEKVQKDDIRVVFSLAGWQAEGIFSTGDVHKQVAIVF
KTPAFHDQSICAPVKVSIHLWRPSDQQQSIPHSFLYKPELDDAFGVERKRKQTPYQLQEF
VNSGAMHAGASGPPAPTAPIAAPMKPSTPATRYSKRLSSSRGLNPRRAGSVIATSPATPS
PPISTPSPPDLNVSPGCIVTSTNTILNVTMSQGRILQAAQAPEAPFTDDQVAQMEEIFAQ
NTGPVSAVLAGDLATLRLTFDPAPAGVAMLVPSTEVAVEEEAARAAMDLALLEDVLPLTA
DDDHMADNVLRELQEGRLHINYNELMNIDGILPEQLMEL
NT seq 1560 nt   +upstreamnt  +downstreamnt
atggccggtcgcggccctgccgcccccttcctggaggtggtcgagcagcccgaggcacgg
ggcatgaggttccgctacccgtccgagggcgcgtgcgcgggctccctgctcggggccagc
actacggaccgcgacaaaacctaccccagcgtgcggctagtgaacttgacgggcaaggcc
gaggtgcaagtgtgcctggtgacacgcgacgctccccaccggccgcacccctacagcctc
gtgggccgcgattgcgaagatggcatcttcaagcagctcgtggtccagggctgctcgacc
gtgcagcttatcaacgttgggattcaatgcgtgaagaagtcgatggtgcagcgctcggct
gaagataagatcagaaaaattaaccccttcaaagtgtcggatcgggtggtggtgcgtccc
gaggagatggacctcacggccgtgaggctctgcttccaggcaaagctgctgcccagcaac
cagattctgaccccggtcctctccgagatcatcttcgacaagaaagcgacgtgcgcgtct
caactaaagatcacgcgcatgaacaaaacttacggcagcgtgcacggaggagacgaggtg
atgctgttctgcgagaaggttcagaaagatgacatccgggtggtcttctcgctggccggc
tggcaggccgagggcatcttctcgacgggcgacgtccacaagcaggtggccatcgtcttc
aagacgccagccttccacgaccagagcatctgcgccccagtcaaggtctccatccacctg
tggcgcccctcggatcagcagcagagcatcccgcacagcttcctgtacaagcccgagctg
gacgacgcttttggagttgagcgcaaacgaaaacagacgccttaccagctgcaagagttt
gtgaactccggagcgatgcacgcaggtgcatcggggccccccgccccgacggcccccatc
gccgctcccatgaagccctccacgcccgcaacgcggtactccaagagactcagttcctcg
cgaggcttgaatccgcgcagagccggcagcgtcatcgccacctccccggccaccccgagc
cccccgatctcaactccgagcccaccggatctgaacgtcagcccgggctgcattgtgacg
tccaccaacaccatcctcaacgtcaccatgtcccagggacgcattctgcaggcggcccag
gcgccggaggcccccttcacggacgaccaggtggcacagatggaggagatcttcgcccag
aacacgggccccgtgagcgccgtgctggcgggtgacctcgcgaccttgcggctcacgttc
gacccggctcccgccggcgtggccatgctggtgccgtccacggaggtggcggtggaggag
gaggccgctcgcgccgcgatggacctcgcgctgctcgaggacgttctgcccctcacggcg
gacgacgaccacatggctgacaatgtcctcagggagctgcaggagggccgtctacacatc
aactacaacgagctgatgaacatcgacggcatcttgccggagcagctgatggagctgtag

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