Petromyzon marinus (sea lamprey): 116947258
Help
Entry
116947258 CDS
T09614
Name
(RefSeq) transcription factor p65-like isoform X1
KO
K04735
transcription factor p65
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04010
MAPK signaling pathway
pmrn04137
Mitophagy - animal
pmrn04210
Apoptosis
pmrn04218
Cellular senescence
pmrn04519
Cadherin signaling
pmrn04620
Toll-like receptor signaling pathway
pmrn04621
NOD-like receptor signaling pathway
pmrn04622
RIG-I-like receptor signaling pathway
pmrn04623
Cytosolic DNA-sensing pathway
pmrn04625
C-type lectin receptor signaling pathway
pmrn04920
Adipocytokine signaling pathway
pmrn05132
Salmonella infection
pmrn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116947258
09133 Signaling molecules and interaction
04519 Cadherin signaling
116947258
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116947258
09143 Cell growth and death
04210 Apoptosis
116947258
04218 Cellular senescence
116947258
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116947258
04621 NOD-like receptor signaling pathway
116947258
04622 RIG-I-like receptor signaling pathway
116947258
04623 Cytosolic DNA-sensing pathway
116947258
04625 C-type lectin receptor signaling pathway
116947258
09152 Endocrine system
04920 Adipocytokine signaling pathway
116947258
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116947258
09171 Infectious disease: bacterial
05132 Salmonella infection
116947258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116947258
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
116947258
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
116947258
NCBI-ProteinID:
XP_032818672
UniProt:
A0AAJ7TLD7
LinkDB
All DBs
Position
29:complement(6236205..6271754)
Genome browser
AA seq
519 aa
AA seq
DB search
MAGRGPAAPFLEVVEQPEARGMRFRYPSEGACAGSLLGASTTDRDKTYPSVRLVNLTGKA
EVQVCLVTRDAPHRPHPYSLVGRDCEDGIFKQLVVQGCSTVQLINVGIQCVKKSMVQRSA
EDKIRKINPFKVSDRVVVRPEEMDLTAVRLCFQAKLLPSNQILTPVLSEIIFDKKATCAS
QLKITRMNKTYGSVHGGDEVMLFCEKVQKDDIRVVFSLAGWQAEGIFSTGDVHKQVAIVF
KTPAFHDQSICAPVKVSIHLWRPSDQQQSIPHSFLYKPELDDAFGVERKRKQTPYQLQEF
VNSGAMHAGASGPPAPTAPIAAPMKPSTPATRYSKRLSSSRGLNPRRAGSVIATSPATPS
PPISTPSPPDLNVSPGCIVTSTNTILNVTMSQGRILQAAQAPEAPFTDDQVAQMEEIFAQ
NTGPVSAVLAGDLATLRLTFDPAPAGVAMLVPSTEVAVEEEAARAAMDLALLEDVLPLTA
DDDHMADNVLRELQEGRLHINYNELMNIDGILPEQLMEL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggccggtcgcggccctgccgcccccttcctggaggtggtcgagcagcccgaggcacgg
ggcatgaggttccgctacccgtccgagggcgcgtgcgcgggctccctgctcggggccagc
actacggaccgcgacaaaacctaccccagcgtgcggctagtgaacttgacgggcaaggcc
gaggtgcaagtgtgcctggtgacacgcgacgctccccaccggccgcacccctacagcctc
gtgggccgcgattgcgaagatggcatcttcaagcagctcgtggtccagggctgctcgacc
gtgcagcttatcaacgttgggattcaatgcgtgaagaagtcgatggtgcagcgctcggct
gaagataagatcagaaaaattaaccccttcaaagtgtcggatcgggtggtggtgcgtccc
gaggagatggacctcacggccgtgaggctctgcttccaggcaaagctgctgcccagcaac
cagattctgaccccggtcctctccgagatcatcttcgacaagaaagcgacgtgcgcgtct
caactaaagatcacgcgcatgaacaaaacttacggcagcgtgcacggaggagacgaggtg
atgctgttctgcgagaaggttcagaaagatgacatccgggtggtcttctcgctggccggc
tggcaggccgagggcatcttctcgacgggcgacgtccacaagcaggtggccatcgtcttc
aagacgccagccttccacgaccagagcatctgcgccccagtcaaggtctccatccacctg
tggcgcccctcggatcagcagcagagcatcccgcacagcttcctgtacaagcccgagctg
gacgacgcttttggagttgagcgcaaacgaaaacagacgccttaccagctgcaagagttt
gtgaactccggagcgatgcacgcaggtgcatcggggccccccgccccgacggcccccatc
gccgctcccatgaagccctccacgcccgcaacgcggtactccaagagactcagttcctcg
cgaggcttgaatccgcgcagagccggcagcgtcatcgccacctccccggccaccccgagc
cccccgatctcaactccgagcccaccggatctgaacgtcagcccgggctgcattgtgacg
tccaccaacaccatcctcaacgtcaccatgtcccagggacgcattctgcaggcggcccag
gcgccggaggcccccttcacggacgaccaggtggcacagatggaggagatcttcgcccag
aacacgggccccgtgagcgccgtgctggcgggtgacctcgcgaccttgcggctcacgttc
gacccggctcccgccggcgtggccatgctggtgccgtccacggaggtggcggtggaggag
gaggccgctcgcgccgcgatggacctcgcgctgctcgaggacgttctgcccctcacggcg
gacgacgaccacatggctgacaatgtcctcagggagctgcaggagggccgtctacacatc
aactacaacgagctgatgaacatcgacggcatcttgccggagcagctgatggagctgtag
Petromyzon marinus (sea lamprey): 116950991
Help
Entry
116950991 CDS
T09614
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04010
MAPK signaling pathway
pmrn04210
Apoptosis
pmrn04218
Cellular senescence
pmrn04519
Cadherin signaling
pmrn04620
Toll-like receptor signaling pathway
pmrn04621
NOD-like receptor signaling pathway
pmrn04622
RIG-I-like receptor signaling pathway
pmrn04623
Cytosolic DNA-sensing pathway
pmrn04625
C-type lectin receptor signaling pathway
pmrn04920
Adipocytokine signaling pathway
pmrn05132
Salmonella infection
pmrn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116950991
09133 Signaling molecules and interaction
04519 Cadherin signaling
116950991
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116950991
04218 Cellular senescence
116950991
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116950991
04621 NOD-like receptor signaling pathway
116950991
04622 RIG-I-like receptor signaling pathway
116950991
04623 Cytosolic DNA-sensing pathway
116950991
04625 C-type lectin receptor signaling pathway
116950991
09152 Endocrine system
04920 Adipocytokine signaling pathway
116950991
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116950991
09171 Infectious disease: bacterial
05132 Salmonella infection
116950991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116950991
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
116950991
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
116950991
NCBI-ProteinID:
XP_032825135
UniProt:
A0AAJ7TY42
LinkDB
All DBs
Position
41:complement(7483202..7539317)
Genome browser
AA seq
990 aa
AA seq
DB search
MGDDLYHLDTNLEMLEQYNTVDIHAFQNEFEVPQPVVTGPYLQITEEPKQRGFRFRYPCE
GPSHGGLPGCSSERNKKTFPTVRICKYFGLAKVVVQLVTENAPYRLHPHSLVGKNAENGA
VSCTVGPHDMTAMFPSLGVLHVTKKSVASVLEKLWSDAQVSGLASIGNIVLENSFNNVNA
RALTDAEARQIKNDAQQGAKTIDLSVVRLMFTAYLPDSNGIFTHRLPPVFSNPIYDSKAP
NANNLKIVRMDKTSGCVTGGDEVYLLCDKVQKEDIQVRFFHDDWEAWGNFGPTDVHKQYA
IVFKTPRYCNVDISKSVTVFVQLRRKSDSETSEAKPFIYYPQKQDKEEVARKRQKTLPHF
SDHLGGGGMGGGMGGGGMGGGMGGGMGGGMGGGMGGGMGGGMSGGMSSTSMAPGAGGGAT
EFFGGPSTESPTGGSFSALGGGGGSMWSHGSHSDFSGGFNFQTNAMNMNFSELTLPVLAP
SHQQDIAGINYAYQGLEFDGSGGVQGSDGMEAFEIIKRPDEEDSDSDDDHLETDAAMEEM
RPTVHAFPVASPLLKGRERPGFVPLKPAHVIGQSPKKVPFVRESPQPTRKPAEARTPKVT
VGQLVKDSAVQTTGRNLEATLLLLAERTAKAQKDYAITADVRMLLAPQRHLTGVQDDNGD
APLHLAVIHQRQLVVQQLLQVIVTIPHQNIVNLPNDLKQTPLHLSVITRQSEVTQILLRS
GADPMVPDRHGNLVVHTAVANNDENTLRILIEWSGEAADRLVDSVNYEGYYPVHVAVMAN
SLACLKMLVNAGADVNRPELTYGRTALHCAVEAENLSLAAYLADQHQTEVDMVTYDGNTP
LHVATGRRLLPMVALLVQAGADVHAENFEAPTYADGFDYVSDDEEEDDSECAESDSGIAR
GTTPLHLAAGNKEVYDILCGKQYESRKPPAVPAADLRAVQSIDSVCDSGLTASIMHLSLE
GSELDSASRRSAASNLIATPVRPADTKSLQ
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgatctgtatcatttagacacaaacttggaaatgctggagcagtataacacc
gtggacattcatgcgttccaaaacgaattcgaggttccgcagcccgtcgtgactggacct
tacctgcaaataacagaggagcctaaacagagaggtttccgctttcgctacccctgtgaa
ggcccgtcgcacggagggctgcccggttgctcgagcgagcgcaacaagaagaccttcccc
accgtcaggatctgcaaatactttggcctagcgaaggtggtggtgcagctggtcaccgag
aatgcgccataccgcctgcacccccacagcctggtgggcaagaatgctgagaacggtgcc
gtcagctgcactgtgggcccacacgacatgacggcgatgttccccagcctcggtgtgctg
cacgtcaccaagaagagcgtggcatctgtactggagaagttgtggtcggatgcacaggtc
tccgggctggccagcattggcaacatcgttctcgagaacagcttcaacaacgtcaacgcg
cgggccctgacagacgcggaggcgaggcagatcaagaacgacgcgcagcagggtgccaag
accatcgacttgagcgtggtgcgcctcatgttcaccgcctacctgcccgacagcaacggc
atcttcacccaccgccttccccccgtcttctccaaccccatctacgacagcaaggccccc
aatgccaacaacctgaagatcgtgcgcatggacaaaacgtcgggctgcgtgacgggaggc
gacgaggtgtacctgctctgtgacaaggtgcaaaaagaggacatccaggtgcgatttttt
cacgacgattgggaagcttggggaaatttcggaccgacggatgttcacaaacagtacgcc
atcgtgttcaagacgccgcgttactgcaacgtggacattagcaagtcggtcaccgtgttc
gtgcagctgaggaggaagtcggacagtgagacgagcgaggcgaagccgttcatctactac
ccgcagaaacaagacaaggaggaggtggcccgcaagcggcagaagacgttgccgcacttc
tcggaccacttgggcggcggcggcatgggcggcggcatgggcggcggtggcatgggcggc
ggcatgggtggtggcatgggcggcggcatgggcggcggcatgggtggtggcatgggcggt
ggcatgagcggtggcatgagctccacctccatggctcctggcgctggcgggggcgccacc
gagtttttcggtggcccgagcacggagagcccgacgggaggctccttcagcgcgttgggc
ggcggtggcggcagtatgtggagccacggcagccactccgattttagcggtggattcaac
tttcaaacaaacgccatgaacatgaacttctctgagctcactctgccagttctggcacca
tctcatcagcaagatattgctggtatcaactacgcttaccagggtcttgaatttgacggc
tccggtggcgttcaaggttcagacgggatggaagcgttcgagattatcaagcgcccggat
gaggaggacagcgacagcgacgacgaccacctggagaccgacgcggcgatggaggagatg
cggccaaccgtgcacgccttcccggtggcgtcgccgttgctcaagggacgcgagcggccc
gggttcgttccgctcaagccggcccacgtgatcggccagagtcccaagaaggtccccttc
gtccgcgagtccccgcagcccacgaggaagcctgcggaagctcggacaccaaaggtcacc
gtggggcagctggtcaaggactcggccgtgcagaccaccggcaggaatctcgaagcgacc
ctgctgcttctagccgagcgcacggcgaaggcgcagaaggactacgcgataacggccgat
gtgcgcatgctgctcgccccgcagcgccacctcacgggtgtgcaggatgacaacggggat
gcacctctacacctggccgtgatccaccagagacaactcgtggtgcaacagctcctgcag
gtcattgtgaccatccctcaccagaatatcgtcaacctgcccaatgacctcaagcagact
ccactgcacctctcggtgatcacgcggcagtccgaggtgacccagattctgctgcgctcg
ggcgccgaccccatggtgcccgaccgccacgggaatcttgtggtgcacacggccgtggcc
aataacgacgagaacacgctccgcatcctcatcgagtggagtggcgaagcggccgacagg
ctggtggacagcgtcaactacgaaggctactaccccgtgcacgtggctgtgatggccaac
agtttggcgtgcctcaagatgctggtgaacgctggagcggatgtcaaccggccggagctg
acgtatggacgcacggcgcttcactgcgccgtggaggcagagaacctgagtcttgctgct
tacctcgccgaccagcaccagacggaggtggacatggtgacgtacgacggcaacacgccg
ctgcacgtggcgacggggcgcagattgttgcccatggtggcgctgctggtgcaagcgggt
gccgacgtgcacgccgagaacttcgaggcgcccacgtacgccgacggcttcgactacgtc
tccgatgacgaggaggaggacgacagcgagtgcgcggagagcgactcgggcatcgcgcgc
ggcaccaccccgctccatcttgccgccggcaacaaggaggtgtacgatatcttgtgtgga
aaacagtacgagtcgagaaaaccgcccgccgtcccggctgcagacctgcgggcagtgcag
agcatcgacagcgtatgtgacagtggattgacggcctccatcatgcacctcagcctagaa
ggctccgagctggactctgcgtctcggcgctccgctgccagcaatctcatcgccaccccg
gtccgccccgctgacacgaaaagcctgcagtga
Petromyzon marinus (sea lamprey): 116953924
Help
Entry
116953924 CDS
T09614
Name
(RefSeq) proto-oncogene c-Rel-like isoform X1
KO
K04735
transcription factor p65
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04010
MAPK signaling pathway
pmrn04137
Mitophagy - animal
pmrn04210
Apoptosis
pmrn04218
Cellular senescence
pmrn04519
Cadherin signaling
pmrn04620
Toll-like receptor signaling pathway
pmrn04621
NOD-like receptor signaling pathway
pmrn04622
RIG-I-like receptor signaling pathway
pmrn04623
Cytosolic DNA-sensing pathway
pmrn04625
C-type lectin receptor signaling pathway
pmrn04920
Adipocytokine signaling pathway
pmrn05132
Salmonella infection
pmrn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116953924
09133 Signaling molecules and interaction
04519 Cadherin signaling
116953924
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116953924
09143 Cell growth and death
04210 Apoptosis
116953924
04218 Cellular senescence
116953924
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116953924
04621 NOD-like receptor signaling pathway
116953924
04622 RIG-I-like receptor signaling pathway
116953924
04623 Cytosolic DNA-sensing pathway
116953924
04625 C-type lectin receptor signaling pathway
116953924
09152 Endocrine system
04920 Adipocytokine signaling pathway
116953924
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116953924
09171 Infectious disease: bacterial
05132 Salmonella infection
116953924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116953924
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
116953924
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
116953924
NCBI-ProteinID:
XP_032830131
UniProt:
A0AAJ7U7K9
LinkDB
All DBs
Position
53:4361347..4395029
Genome browser
AA seq
750 aa
AA seq
DB search
MSSLSLIVGAARVGGRGCWSCSNASGSSSSGGLFPSIDPGALENMLAMKPPQLEVYEQPK
SRGMRFRYECEGRCAGSILGDRSTDSNKTYPAVKLVNCTGPAKVRVSLVSKNDPHRPHPH
SLVGKDCSDGVCEVDVSSGVTIVQFQNLGIQCVKKKEVADALKLRLQKNVNPYKVSEEQA
LGTEEIDMNVVRLCFEAFIHERGRVIALPPIVSQEIRDKKAPNVSELKICRVNLNAGSAR
GGDEVFLLCDKVQKEDIEVRFFEPDGSWESRGSFSQADVHRQVAIVFRTPAYRDPGITRP
ASVRMQLRRPSDGEASEPIEFRYIPVDPDPHKLQEKRKRKADSFDKFLESTNITGLGTPS
GNIAERKVAVSTTSSQKSKELLRQKIQDKTQEASFMRGAGFVSSPRTPPASAGYDAQPSL
SGVTVAPSVHPAMPSSSLSLLLPAATSKAPSPGHTARQSSVAVSASPSVGSVLVLGTGGG
HYSQSALAADMQGLNVTELNPVRPPAAAAAAAAAQSRAAENHSPLTSFDMPAATGGGIDS
LTAMSFSEFEFLGNDMYPFVPNEDLVIFATPASPTLPAQHVTLTSAAAAATAAAAATTAT
GTPDPDQTTSVSQLSQQQISDVLNIIQHSMRHQQDGATAPETAAATGAAQANFATNSPDG
REVPAWSGGAVNAQSQIHSHSPAPDQSLQAPGAVYLAGQTGSGLGPGYLSFPDDMRMESL
ERLDSAELNRLLETVTMDMTNNVGSADGFL
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcattgtcgctcatcgtaggcgcggcgcgtgtgggaggccgtggctgctggagc
tgctcgaacgcgagcggcagcagtagtagcggtgggctttttccgagcattgatcctggc
gccctggagaacatgctggctatgaagccgccacagctggaggtgtacgagcagcctaag
tcgcgcggcatgcgcttccgctacgagtgcgagggccgctgtgcaggcagcatcctggga
gatcgaagcacggacagcaacaagacctacccggccgtcaagctggtgaactgcactggg
ccggccaaggtgcgcgtgtcgctcgtgagcaagaatgacccgcaccggcctcacccgcac
agcctggtagggaaggactgctcggatggtgtgtgcgaggtggacgtctcctcgggggtc
accatcgtgcagttccaaaatctgggcattcagtgcgttaagaagaaagaggttgcggat
gccctgaagctgagactccagaagaacgtgaacccttacaaagtttcagaggagcaggcc
ctgggtacagaggagatcgacatgaacgtggtgcggctctgcttcgaggcattcatccac
gagcgtggtcgcgtcattgccctgccacccatcgtctcccaggagatcagagacaagaag
gcaccgaacgtctcggagttgaaaatttgccgtgtcaacttgaatgctggcagtgcacgt
ggtggggatgaggttttccttttgtgtgacaaagttcagaaagaagacatcgaggtgcgc
ttcttcgagccggatggcagctgggagtcgcgcggcagcttctcgcaggccgatgtccac
cggcaggtggccatcgtgttccgcacaccggcgtaccgcgacccgggcatcacgcgtccc
gccagcgtgcgcatgcagctgcgacggccgtcggatggagaagccagcgagccgatcgag
ttccgctacatcccagtcgatcccgatccccacaagctgcaggagaagcgcaagcgaaag
gccgattcgtttgacaaattcctggaaagcaccaacatcaccgggctcgggactccgtct
gggaatattgcagagaggaaggtggctgtgagcactaccagttcgcagaagtccaaggag
cttctccgccagaagattcaagataaaacccaagaagcctccttcatgcggggtgctggc
ttcgtctcctccccacgcacaccgccagcctccgccggctacgacgcgcagccctccctg
agcggcgtcaccgtcgcgccatccgtccatcccgctatgccttcgtcgtcgttgtcgctg
ctgctacccgcggcaacatcaaaggcgccatcgcccggtcacacggcgcgccagagctct
gtggctgtgagcgccagccccagcgtcggctccgtgctcgtgcttggcacaggcggcggc
cactactcgcagagcgcgctcgccgctgacatgcagggcctcaacgtcaccgagctgaac
cctgtacggccaccggcagcagcggcggcagcagcagcggcgcaatcgagggctgccgag
aaccacagtcccctgacgtcgttcgacatgcctgccgcgacagggggcggcatcgacagc
ctgacggccatgagcttcagcgagtttgaattcctcggcaacgacatgtacccgttcgtg
cccaatgaagacttggtgatattcgccacaccggcctcgccaacgctgcccgcgcaacac
gtgactctcaccagcgccgccgccgccgccacggccgctgccgccgccacaaccgccacc
ggcacacccgacccggaccagacgacatcggtgagtcagctgtcgcagcagcaaatctcc
gacgtgctcaacatcatccagcactccatgcgtcatcagcaggatggcgccactgccccg
gaaacggccgcggcaaccggtgccgcccaggcgaactttgcgacgaattcgcccgacggg
cgggaagtgccggcttggtccggcggtgcagtgaacgcacagtcacaaatacattcgcat
tcgcctgcgcccgatcagtccctgcaggcgccgggagccgtgtacctggcagggcaaact
ggctccggcctgggacccggctacttgtcgtttcccgacgatatgcgcatggagagcctg
gagcggctcgacagcgctgagctcaaccggctgcttgagacggtgaccatggacatgacc
aacaacgtgggcagcgctgacggattcttgtag
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integrated database retrieval system
