Petromyzon marinus (sea lamprey): 116947560
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Entry
116947560 CDS
T09614
Symbol
NUP210
Name
(RefSeq) nuclear pore membrane glycoprotein 210 isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116947560 (NUP210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116947560 (NUP210)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116947560 (NUP210)
BRITE hierarchy
Motif
Pfam:
Big_2
Motif
Other DBs
NCBI-GeneID:
116947560
NCBI-ProteinID:
XP_032819334
EnsemblRapid:
ENSPMAG00000000372
LinkDB
All DBs
Position
30:8831895..8873639
Genome browser
AA seq
1949 aa
AA seq
DB search
MPPAGEAWPRRGDRLIGRRRPTRPGLPLFLSALLLLLLASGTETSKLNVPKILLPYAGAS
QINYTLEAESGCYRWQSSRPEVASVEAVYSTDDAGQRCSSRAVVSARAAQHTRLTTIVIA
EDTVSGQVLRCDVIVDTIQHIQIVSTTRELYLDDSPLELTIQAGDREGNTFTTLAGLQFD
WTTIKDEEVLSTADGHNALRFLRFSEAAYRPPAYILEMERKGRQGDRMLVSGLKTGSARV
KTKIREPLYKGVEATEVRLVILESILLSPAHDVYLLVNTHIHYRVLKVKQGRLIDIPMPS
EQYELQLQGPVTKNGPVARLDVQTSVLVAQNLGQTSLLLVHKNIRMQGVSRLPNSTVYVI
EAAFLGFLIEPGEHWVLEVGREYWITVEVFDKNGNRIHLTDNVRIETTFPKKFFNVLESN
LNGSQHRVQALHRGQTEVKAILAHVLAPNGKSLALPQTISNQQEVEIFDPIVLQPPLLIY
PWQPSRVHYHYTLKAEGGSGNFSWSSTETEVATVTVRGLLTTADAVGTSVIRARDVQNPL
HFGSMKVRMLEVVLLEFGRSKLEARVGGVLELPVRASGLVDPATRQTMMFFDCSQMHFTT
DLANTAVFQVVEGNLPPGNGYCMAVRVRALSAGHTTISISYTHGTTHLHDSITIAAYLPL
KVVDPISVALVTLGASKEVVFEGGPRPWVLEPSKFYARLDAQDEDLVTKHAVGYGEQQWH
QRHTFRVLCTALGEQALTLTVGNHESASNPLPAEEWTHTHFVCARPASLSLAPVYLPTST
GRPCPLTQQKRQLVPMSNHRDAQLLLVALDQQGEHFDNFSSLALEWFSSDANLASFPESS
TLLHFHEEQQQQGTGQALAYSVQRVTTHRKKGTVTIKVSASTYSDHLLRETLARKEDLTL
PTVSASIELLLVEDVSISPNNLTIFNHPEAKVTLTLSEGSGFFHVNASGNDVMQINHQDV
NAVQVVPLQPGTLSLLVLDLCLALPSSARAEVRVSNIQELLIDVLDKVEIGKAVRAYVRV
LDHQRKPFLSQFLRHMGLKLTSASNILNLEPLLEAPDDVSVAYLVHGLAVGQTTLTASAR
DRTGRKINAMPKEIQVFPPFKLSPRKLVLLIGAKMQVMSEGGPQPQSNLVFRLENGTVAR
VGSAGHVTAVTLGTTRLLGSIQATDPDMRKVVVFSQDAVDVEVVPLRGVRIHVPLTRIMT
SSLMPVYVTGLGSGQTPFSFGSIRPAFTFHWSVSKRDVLELRGRHSEASLQLSERHSFSL
VLRGRAQGRVVLKVTVRATDPKAGQFEGGVRELTDEVQIQVFEKLEITNPEGDTRQLLLS
PKATFPLHTNRDAVSRVSYRVLDCPLGGSVVSVDEQGLVTACAATGVAIVAATAQEPFGL
NQTAVIGVRVAAVAYVRVSVALPLYTLGREPLPYFPLGASLALVAHLHDNTGQVFHSASL
ALRCTLNRDDLAQVRPGSVNNTFVAAVGGLGSTVLSVWDPDLPGLADFLPLPVGHAIGPA
DGLADVSLGDVICLSTALTAQDGSSGVWSSSDELLLFVDAHTGVAVAKDVGTVHIYYEIT
GLIKTYIEVVIQPLKKIRATYLGAMALTNWPKTEGVRVTVTLGSGESNMKGQCSASQLQA
MHVLPLASNLQCHTQFSNPEVTHVTTHAAFSVSPAFDVANGHYTCDVSPLPLADAGRQKS
LSVAATSVHVWATVREASCGGDGVGCGGGNDGGGGATAHGTAVAVVPFLPAFYVEPREVV
LSGRHAAALFTVHATEEALRYLEVSSNKPFVLVQRSSLGSNWVQFSVQLTDDNTALRHVN
GEEVAGPMSEAVPVVSVSCSATGQRQELHVHLAVAGDATAAASLSSEPAHEGSFQHLMKG
HQNFLLILFLILLSVALAIIVYYSMVAPGQSVQHPAFLPRGASPLHNNSPATPLSPWRSD
SPESPASLRSSPNKRLWSTETADYLHRRS
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggcgggagaggcctggccacgccgcggcgaccgcctcatcggtcgccgccgt
ccgactcgtcctggactgccgctgtttctgtcggcgctgctgttgctgctgttggcgagc
gggaccgaaacgtcgaaactgaacgtgcccaagatcctgctgccgtacgcgggcgcctcg
cagatcaactataccttggaggcggagagcggctgctacagatggcagtcgtcccggcct
gaggttgcgagcgtggaggccgtgtacagtaccgacgatgcagggcagcggtgctccagc
cgcgccgtggtgtcggcccgcgccgcccagcacacccgcctcaccaccatcgtcattgct
gaggacacagtgtcgggccaagttttacggtgcgatgtgatcgtcgacactatccagcac
atccagatcgtctcgacaacgagagaactctacctcgacgactctccactggaactcacc
atccaggccggcgaccgcgagggaaacacgtttaccacccttgctgggctgcagtttgat
tggacgaccatcaaggatgaggaggtgctgtccactgccgatggacacaatgccttgcga
tttctccggttctccgaggcggcgtaccggccaccggcctacatcctggagatggagagg
aaaggccggcagggcgaccgcatgctcgtgtctggcctcaagacgggcagcgcccgcgtc
aagaccaaaatacgagagcccctgtacaagggtgtggaggcgaccgaggtgcgcctcgtc
attctggagagcatcctgctgagccccgcgcacgacgtgtacctcctcgtgaacacacac
atccactaccgcgtgctcaaggtcaagcagggccgcctcattgacatcccgatgccatcg
gagcagtatgagctgcagctgcagggcccggtgacaaagaatgggcctgtggcccggctg
gatgtgcagacctccgtcctggtggcccagaatctggggcagacaagcctcctccttgtg
cacaagaacattcgcatgcagggtgtctcgcgtctccccaactccactgtctacgtgatc
gaggccgccttcctcggttttctgatcgagccgggagagcactgggtgttggaagtgggg
cgtgagtattggatcacggtggaagtgttcgacaagaatggcaaccgtattcacctgacc
gacaatgtgcgcatcgagacaacgttcccgaagaaattcttcaacgtcctggagtcaaac
ctgaatgggtcgcagcatcgcgtgcaggccctccaccggggacagactgaggtcaaggcc
attctcgcccacgtcctggccccgaatggaaaatcgctggctctcccgcagacaatctca
aaccagcaggaggtggagatttttgaccctatagttctgcagccgccccttctcatctac
ccgtggcagcccagccgcgtgcattaccactacacgctcaaggctgagggcggcagcggc
aacttcagctggtcatcgactgagacggaggtggccacggtgacggtgcgggggctgcta
acgacagcagatgcggtggggacaagtgtaatccgtgccagggatgtgcagaaccctctc
cattttggcagcatgaaggtgcgcatgctggaggtggtcctcttggagtttggccgctcg
aagctggaggcgcgcgtgggtggggttctagagctgccggtgcgtgccagcggcttggtg
gacccggccacacgccagaccatgatgttcttcgactgctcgcaaatgcacttcaccacc
gacctcgccaacacggccgtgtttcaggtcgtcgagggaaacctgcctccgggtaatggt
tactgtatggcggtgcgtgtgcgcgccctctcggccggacacacgacgatcagcatctcc
tacacgcacggcaccactcatctccacgactccatcaccatcgccgcttacttgccgctg
aaggtggtggacccgatctccgtggcccttgtcactctgggggcctccaaggaggtggtg
tttgagggcgggccccggccctgggtgctggagccatccaagttctatgcacgactggac
gctcaggacgaggaccttgtcacgaagcacgcggtgggctacggcgagcagcagtggcac
cagcgccacaccttcagggtgttgtgcaccgcgctcggagagcaggcgctcacgctgacg
gtggggaaccacgagagtgcatcaaacccgctgcccgcagaggagtggacgcacacgcac
tttgtgtgcgcgcgccccgcttcactcagcctggcgcccgtctacttgcccacgtccaca
ggccgtccatgcccactcacccagcagaagcggcagctggtgcccatgtccaaccaccgc
gacgcgcagctgctgctggtggcgctggaccagcagggcgagcacttcgacaacttcagc
tcgctggcgttggagtggttctcctcggacgcgaacctcgcctccttccccgagtcctcc
acgttgctccatttccatgaggagcagcagcagcagggcactggccaggccctcgcatac
agtgtgcagcgggtgactacgcaccgtaagaaagggaccgtcaccatcaaggtctccgcc
agcacgtactcggaccacctcctgcgggagaccctcgctcggaaagaggacctaacactg
ccgaccgtctcagcctccatcgagctgctcctcgtggaggacgtcagcatctccccgaac
aacctcaccatcttcaaccatcctgaagccaaggtgacactcacgctgagcgaaggttcg
gggttctttcacgtcaacgccagcggcaacgacgtcatgcagataaatcaccaggatgtc
aacgctgtgcaggtggtgcccctacagcccggcactctgtccctgctggtgctcgacctg
tgcctggctttgccgtcgtctgcccgtgcagaggtccgagtctccaacattcaagagctc
ctcatcgacgtcctcgacaaggtggagattggcaaggcggttcgtgcatacgtgcgggtc
ctggatcaccagcggaagcccttcctgtcccagtttctccgtcacatgggactcaagctg
acgtctgcctcgaacatcctgaatttggaacccttgctggaggcccctgatgacgtgtcg
gtggcgtacctggtacatgggctggcggtggggcagaccacgctcaccgcatcggctcgg
gatcgcactggccgcaagatcaacgccatgcccaaggagatacaggtgtttcctccgttc
aagttgtccccacgcaagctggtgctgctgattggagccaagatgcaggtgatgtcagag
ggtggaccccagcctcagtcaaacctcgtgttcagactggagaacggcacagtggcgcgc
gttggctcggcgggccatgtcacggcggtgaccttgggcaccacgcgcttgctcggctcc
atccaggccaccgatcccgacatgcggaaggttgtcgtcttctcacaggacgcagttgac
gtggaggtggttcccctgcgcggtgtgcgcatccacgtgccgctcactcgcatcatgacc
agctcactgatgccggtgtacgtgacggggctggggagcgggcagacccccttctcgttc
ggcagcatccgtccagcattcaccttccactggagcgtcagcaagcgcgacgtgctggaa
ctacgtggccgccactcggaggcgtcgctgcagctgtcggaacggcacagcttctcgctg
gttttgcggggccgcgcccagggccgcgtcgtactcaaggttactgtgagggccacagac
cctaaggctggccagtttgagggcggcgtccgggagctgacggacgaggtgcagatccag
gtgtttgagaagctggagatcacaaacccggagggtgacacgcgccagctgctcctgtct
ccaaaggccacgttccccctgcacaccaacagggacgcggtgtcccgcgtgagctaccgc
gtgctggactgccccctgggtgggtccgtcgtttcggtggacgagcaaggactcgtcacg
gcgtgcgctgcgaccggcgtcgccatcgtcgccgccaccgcccaggagccctttggcctc
aatcagacggcggtcatcggtgtacgggtggcggcggtggcatatgtgcgtgtgagcgtg
gcgctgccgctctacacgttgggccgcgagccgctgccgtacttcccactcggggcctcg
ctagcgctcgtcgctcacctgcacgacaacacagggcaggtgttccactcagccagcctg
gcgctacgctgcaccctcaacagagacgacctggcgcaggtgcggcccggctcggttaac
aacacgttcgtggcggcggtgggcggcttgggctccaccgttctctcggtgtgggaccct
gacctccccggcctggccgacttcctgcccctgcccgtgggtcacgctatcgggcctgcc
gatggcctggcggacgtctcgcttggtgacgtcatttgcttgtcgacggctctcacggcc
caggacggctcctctggtgtgtggagttcttcggatgagttgcttctcttcgtggacgcg
cacaccggagttgcagtcgctaaggacgttgggacggtccacatttactacgagatcaca
ggcctcataaagacctacatcgaggttgtgatacagcccttgaaaaaaatcagggctacg
tacctgggtgccatggctctaaccaactggcccaagacggagggggtcagggtgactgtc
acgctggggtcaggagaaagcaacatgaaaggccagtgcagtgccagccagctacaggcc
atgcacgtcctgcccttggccagcaacctccagtgtcacacgcagttcagcaaccccgag
gtgacgcacgtcacaacgcatgcggcgttcagcgtctcgcccgcgttcgacgtcgccaac
gggcactacacgtgcgacgtctcgccgttgccgctcgccgacgccgggcggcagaagtct
ctgagcgtcgccgccacaagcgtgcacgtctgggcgaccgtgcgcgaagcttcctgcggc
ggcgacggcgtgggctgcggcggtggcaacgacggcgggggcggcgcgactgcccacggc
accgccgtggccgtggtgccgttcttgccggcgttctacgtggagccgcgggaggtggta
ctctccgggcgacatgctgcagcgttgttcaccgtgcacgccaccgaggaggcgctgcgc
tacctggaggtgagcagcaacaagccgttcgtgctggtgcagcgcagcagcttgggtagc
aactgggtgcaattctcagtgcagctgacggacgacaacaccgccctgcgccacgtcaac
ggggaggaggtggcagggccgatgtccgaggctgtccccgtggtctccgtgagctgctct
gccacggggcagcggcaggagctgcatgttcaccttgcggtcgccggtgacgccaccgcc
gcggcatcgctgtccagtgagcctgctcatgagggctcatttcagcacctgatgaagggc
caccagaacttcctgctcatcctcttcctcatcctcttgagtgttgccctcgccatcatc
gtgtactactcaatggtggcaccggggcagtctgtgcagcacccggccttcctgccacgt
ggagcgtctcccctccacaacaactcccccgccacccctctgtcgccatggcgctccgat
tctcccgagagccccgcctcgcttcgatccagccccaacaagcgactgtggagcacggag
accgcggactacctgcaccggcgtagttaa
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