Petromyzon marinus (sea lamprey): 116948380
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Entry
116948380 CDS
T09614
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1-like isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116948380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
116948380
Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
116948380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
EGF_TEN
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
116948380
NCBI-ProteinID:
XP_032820889
UniProt:
A0AAJ7TNY6
LinkDB
All DBs
Position
33:complement(6366306..6470287)
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AA seq
2021 aa
AA seq
DB search
MMMMMMKVIPRLGGVALSSSTLSLLAITMVTLLALGATQPNTQPRRSQQHHHQHQQLQQQ
QQQQQQLQQQRTPVRTPLVAQRLGHQSAASAAGASAVMVAPVQTRLRGQGTRFGHQGDAH
GAATTTTTSSAGGVDGYQAGRTRTRAVEGGAAGGHGKGAGGGGGGVVATGLGANPRSGVP
GPARTQANSATVLTGLNVCGGQCCPGWKLSPGLQKCTKPICTPACQNEGMCLRPQLCLCK
PGFAGQACEVVRAPAQLQPHGAVKKPAASLLQPGDGQQQQQQQRQQPEPNGDGGGVPSGV
ASLNRNPNRSHATAGRPPQGQAAQGGAPSHLGPQQRLVRQRIIGRQALNRLLSGRGGGRL
NHGDPQGLQYVPRPGDENGNYSVPVPKRIKVVFTPTICKLDCAGSVCKTSCSKGNVTTII
AEDGQTIFPQHGSGFRIVICGIPCHNGGRCAAREKCWCPPNFTGKFCQIPALTNEVNGQA
ATGSEAQAASGGRRPSQPSHSVYMFPLSTIGNSTQVSAPGSLPSYPDLVNVHVKHPPEAT
VQIHQVARLMDGLNISHHQAHRPPHPLPSPRIRPLASLASLGGNQQRDKERDQAIAGGAD
PSQPRILARAPMLGRCYVDIKDNKCVKPLPGLTRQEVCCGSVGAAWGLDRCNRCPEKLGQ
PIMVNGELVECPHGFRRENSTHCKDINECQLRGVCPNSTCLNSPGSYTCSCFIGYVFDST
SHQCISDKLLSGKTGLCYRATDGRSCSLPIAIPLTKHICCCSVGKAWGKNCEPCPPEGHT
AFRETCPAGMGYHFPMSEVKYKIRKLTEDEVAQRGREPAGRPLPTPADGDDAALLRGLDD
YDILEGQQIIAQLQDGQRSFQEISQRLQRPALVEPPPGAATGRETHGGGGGGSVRQPVAG
AVGAISSDREPPKRIQIGTSRESPGSVVRQPGGGAGAIPPDRDSPKRIQTVTNICLQNPN
ICGRGQCVSLAVGYSCSCEPGFQANGQKTRCIDVDECQKNAGLCANGQCENTPGSFRCVC
STGYAASPSSTQCVDVNECKDPSACRTGRCINTPGSFHCQPCQPGYRAGRRGQCEDVDEC
ASPGACPSGECVNSLGSFECRPCPAGFTGSGGRCVDENECLSSTTVCQHGRCVNLQGSFR
CSCGRGFTTAPDGKSCLDVDECGVGRPCRDSMCRNSPGSFTCVPCGSGYQLAPDGKACKD
VDECTNGIVCGGGACLNSDGSFRCECRPGFRLSGSGDQCEDIDECGEGGRCQGGECLNVA
GSYTCRCSAGYVAVDSTRCRDVDECAGGRACRGHGGDGTCINTPGSFRCSCPSGYRTVPG
SDLCVDADECEEDADAVCWPHQYCVNSHGSYSCLCDQGFQSAEEGKGCVDVNECELVVGV
CGEALCENVEGTFFCVCDSEGDDYDHTLGRCQPHSSTEFNESLNLHSQAAQPGTRPGSHE
TTDVGQLPGTQRQQQQQRQQQQRQQQQQQQRQQQQQPGGAGQRTPMSSRPQPGHSSHTDG
QPAHGSPSRTPDPRPGSHDRQRGPAVHTAQRVHTALPEGHGQVGSANPPAGTPARPDSAI
GVPNLHSTGSLPGLTWRLGFAETTERHGAVVFPEGSDRRPAAVPARTGSSGRDERKECYY
DVDAETACSNVLAWNATRAECCCTAGAGWGADCAIRPCPPAGTEEFRSLCPEGRGNIPSQ
DPVTSRRIFQDADECTLFGREICKMGRCTNSRPGYTCQCQPGYFYNAVKLQCLDIDECQS
PESCLDGQCYNSEGSYNCFCTPPLVLDDTGKRCVNRSGPADEHLDNVHVDICWTELSRSF
MCSKPVGRQTTYTECCCLYGEAWGPECAFCPPKSSDDYALLCNIRMRTDVDNFGHSLDPS
FGYSGPYGGIGGDGAPGPHYLPEPNYLDRGAAAAAAGASVGFYPGNEGNVPIFLPDEAAG
SYPYREGLQAEECGISHGCENGRCVRVPEGFTCDCYVGYKLDNLSVVCVDIDECEEEPAP
CANGRCLNADGSFRCTCDAGFIASQRGSQCLPIPWALLPGR
NT seq
6066 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatgatgaaggtgatacctcgtctcggaggtgtggcgttgtcatcttct
acgctgtctcttctcgctatcacgatggtgactttacttgcgcttggagcaacacagccg
aacacacagccccggaggtcccaacagcatcatcatcaacaccagcaactgcaacaacag
caacagcagcaacagcaactgcagcagcagcggactcctgttcggacccctcttgtggcg
caaagacttggccaccaatcagcagcatcagcagcaggggcatctgcggtgatggtggca
cccgtgcaaacgagactacgcggtcaagggactcgctttgggcatcagggagacgctcac
ggcgccgccaccaccaccaccacgagttcggctggaggcgtcgacggctatcaagccggg
aggacgaggacgcgagctgtcgaaggtggcgctgccggtggccacgggaaaggagcggga
ggaggaggaggaggggtggtggccaccgggctcggtgcgaacccgcgatcaggcgtgccc
ggccccgcccgtacccaggccaactcagccacagtgctcacaggactcaatgtctgcggt
ggtcaatgctgcccgggttggaagctgagtcccggacttcaaaaatgcaccaaacccatc
tgcacccctgcctgccagaacgagggcatgtgcctgcgaccacagctatgcctctgcaag
ccgggcttcgccggacaggcgtgcgaggtggtgagggctcccgcgcagttgcagccgcac
ggcgccgtcaagaagccggcagcctccctgctgcagcccggcgatggccagcagcagcag
cagcagcagaggcagcagccggagccaaacggtgatggtggtggcgtcccaagcggcgtg
gcttcactgaaccggaacccaaaccgcagccacgcaacggccgggaggccaccccaaggg
caggcagctcaaggtggagcaccttctcacctgggtccccagcagaggctggtgaggcag
aggatcatcgggcggcaggcgctgaaccgcttattgagtggccggggcggcggacgcctg
aaccatggggacccccagggtctgcagtacgtgcccaggcccggtgacgagaacggaaat
tactcggtcccagtccccaagcgcatcaaggtcgtgttcacgccgacgatctgcaagctg
gactgcgccggctccgtgtgcaagacctcctgctccaagggcaacgtcaccaccatcatc
gccgaggacggccagactatcttcccgcagcacgggtccggcttccgcatcgtgatctgc
ggaatcccgtgccacaacggcgggcggtgcgctgccagggagaagtgctggtgcccgccc
aacttcacgggaaagttttgccaaatcccggcgctcaccaacgaggtgaacgggcaggcc
gccacagggagcgaggcccaggcggcctctggtggccgtcgccccagtcagcccagtcac
tccgtctacatgttcccgctgtcgaccatcggcaactcgacgcaggtgtccgcgccgggg
tccctgcccagctacccggacctggtgaacgtccacgtgaagcacccgcccgaggccacg
gtgcagatccaccaagtggcccgcctcatggacggcctcaacatctcgcaccaccaggcc
caccggccgccacaccccctgccgagccctcgcatccgcccactcgcctcgctcgcgtcg
ctgggtgggaatcagcagcgagacaaggagagggaccaggccattgcgggtggagctgat
ccttcccagcccaggatactagcccgtgcgcccatgctgggacgatgctacgtggacatc
aaagacaacaagtgtgtaaagcctctgccaggcctcacgaggcaggaggtgtgctgtggg
agcgtcggggctgcttggggccttgaccggtgcaaccgatgtccggagaagctggggcag
cccatcatggtgaacggcgagctggtggagtgcccccacggcttccgcagggaaaactcg
acgcactgcaaagatattaacgagtgtcagctgcgcggagtctgccccaactccacgtgc
ctcaacagcccgggcagctacacctgcagttgcttcatcggctacgtcttcgactccacg
agccaccagtgcatctccgacaagctactctcgggcaaaacggggctgtgctaccgcgcc
accgacggccgctcctgctcgctgcccatcgccatccccctcaccaagcacatctgctgc
tgcagcgtgggcaaggcctggggaaagaactgcgagccttgccccccggagggacacacc
gcgttccgggagacgtgcccggccggcatgggctaccacttccccatgtccgaggtcaag
tacaagatccgcaaactcacggaggacgaggtggcacagcgcgggcgcgaaccggccggg
cgcccgctgcccaccccggccgacggggacgacgccgcgctgctccgcggcctcgacgac
tatgatattttggaaggtcagcagattatcgctcagctccaagatggacagcggagtttc
caagagatctcgcagaggctgcagcgtccagccctggtggagcctcctcctggagcggcc
acggggagagagacacacggaggtggcggcggcggcagcgtgagacagcccgtggcaggg
gcggtcggggccatctcgtccgacagggagccccccaagagaatccagataggtacctcg
cgtgaatctcctggcagcgtggtgagacagccaggaggaggagctggtgccatcccgccc
gacagagactcgccaaagagaatccaaacggtgacgaacatctgcctccaaaatccaaac
atctgtggccggggccagtgcgtgagtttggcagtggggtacagctgctcgtgcgagccg
ggattccaagcaaacggccaaaaaacgcgatgtatcgatgtagacgaatgtcagaagaac
gcgggcctctgtgcaaacgggcaatgcgaaaacacgcccggaagcttccgctgcgtctgt
tccacgggctacgctgccagccccagcagcacccagtgtgtcgacgtgaacgagtgcaag
gacccaagcgcgtgccggacgggtcgctgcatcaacacgccggggtctttccactgccag
ccgtgccagcccggttaccgtgccggccggcgcggccagtgcgaggacgtggacgagtgc
gcaagccccggcgcgtgccccagcggggagtgcgtcaactcgctgggctcgttcgagtgc
cgcccgtgccctgccggcttcacgggctccgggggacgctgtgtcgacgagaacgagtgt
ttgagcagcacgacggtgtgccagcacggccgctgcgtcaacctccaggggtcgttccgc
tgctcctgcggacgggggttcacgacggcgcccgacgggaagagctgcctggatgtggac
gagtgcggcgtggggcgaccgtgccgtgactccatgtgccgcaactccccgggctccttc
acctgcgtgccctgcggctccggctaccaactcgcacccgacggcaaggcgtgcaaagac
gtggacgagtgcaccaacgggatcgtgtgtgggggcggcgcctgcctcaactcggacggc
tccttccgctgcgagtgccgcccgggattcaggctgagcggcagcggcgaccaatgcgaa
gacatcgacgagtgcggagagggcggtcggtgccagggcggcgagtgcctgaatgtcgcc
ggctcctacacgtgccgctgctcggcgggctacgtggccgtcgacagcacgcggtgtcgc
gatgtggacgagtgtgcgggcgggcgagcgtgccgcggccacggcggcgacggcacctgc
atcaacactcccggctcgttccgctgctcctgcccaagcggctaccgcacggtgccaggc
tccgacctgtgcgtcgacgcggacgagtgcgaggaggatgcagacgccgtatgctggccg
caccagtactgcgtcaattcccacggatcctactcctgcctgtgcgaccagggcttccag
agcgccgaggaaggcaagggatgcgtagacgtgaacgagtgtgagctggtggtcggtgtg
tgtggcgaggcgctgtgcgagaacgtcgaggggaccttcttctgcgtgtgcgacagtgag
ggcgacgactacgaccacacgctggggcgctgtcagcctcactcgtccacagaattcaac
gagtcattgaacctgcacagccaagctgcccagccaggcactcgaccaggctcccacgag
acaacggacgttggacagctcccgggcacgcagaggcagcagcagcagcagaggcagcag
cagcagaggcagcagcaacagcagcagcagaggcagcagcagcagcaacctggcggcgca
ggtcagcgaacaccgatgtcgtcgaggccacaaccaggtcacagctcgcacacggacggg
cagccggcgcacggatcaccgtcccgcactccggacccgcggcccgggagtcatgatcgc
cagcgaggacctgctgttcacacggctcaacgcgttcacacagcactcccggagggacat
ggccaggtcggctctgccaatcctcctgcaggcacgccggcgcggcccgattctgccatc
ggagttcccaatctccactccacgggatcgctgcccggcctcacgtggagactaggtttt
gccgaaacgacggagaggcacggtgcggtcgtcttcccagaaggctccgaccggcggccg
gccgcagtgcccgcgaggacggggagctctggccgcgacgagcgcaaggagtgctactac
gacgtggacgccgagaccgcgtgctccaacgtgctcgcgtggaacgccacccgcgccgag
tgctgctgcaccgcgggcgccggctggggcgccgactgcgccatccggccctgcccgccc
gccggcaccgaggagtttcggtcgctgtgtccagaaggcagaggaaacatcccgagccag
gaccctgtcaccagcaggagaatcttccaagacgccgacgagtgcacgctgttcggacgc
gagatctgtaagatgggacgctgcaccaactcccgacccggctacacctgccagtgtcag
cccggctacttctacaacgccgtgaagttgcagtgcctcgacatcgacgagtgccagagc
cccgagagctgcctggacgggcagtgctacaacagcgagggcagctacaactgcttctgc
accccgccgctggtgctggacgacacgggcaagcgctgcgtcaaccgcagcggccccgcc
gacgagcacctggacaacgtccacgtggacatctgctggacggagctgtcgcgctccttc
atgtgcagcaagccggtgggacgccagacgacctacacggagtgctgctgcctctacggc
gaggcctggggccccgagtgcgcattctgccctcccaagtcctcagacgactacgcgctg
ctgtgcaacatccgcatgaggacggacgtggacaactttggccactcgctcgacccgtcc
ttcggctattccgggccgtacggcggcattggtggtgacggcgcgcccggcccgcactac
ctgcccgagcccaactacctggaccggggtgccgcggctgccgccgccggtgcctccgtg
gggttctaccccggcaacgagggcaacgtccccatcttccttcccgacgaagcagcaggc
tcgtacccgtaccgggaggggctgcaggcggaggagtgcggcatctcgcacggctgcgag
aacggccgctgcgttcgagtccccgagggcttcacgtgcgactgctacgtgggatacaag
ctcgacaacctcagcgtcgtctgcgtcgacatcgacgagtgcgaggaggagcccgcgccc
tgcgccaacggccgctgcctcaacgcggacggctccttccggtgcacgtgcgacgccggc
ttcatcgcgtcacagcggggcagccagtgcctgcccatcccgtgggccctgctgcccggc
cgctag
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