Petromyzon marinus (sea lamprey): 116948469
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Entry
116948469 CDS
T09614
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04620
Toll-like receptor signaling pathway
pmrn04621
NOD-like receptor signaling pathway
pmrn04622
RIG-I-like receptor signaling pathway
pmrn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116948469
04621 NOD-like receptor signaling pathway
116948469
04622 RIG-I-like receptor signaling pathway
116948469
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116948469
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
zf_C2HC_14
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-TRAF_2
Sina_ZnF
zf-C3HC4_4
ADIP
Motif
Other DBs
NCBI-GeneID:
116948469
NCBI-ProteinID:
XP_032821054
UniProt:
A0AAJ7TP94
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All DBs
Position
33:9520678..9571293
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AA seq
580 aa
AA seq
DB search
MAALLPGVGPSTQASSLHTLVKDGAPISSYLPASVGGEAPTCGYREHFVHPPEDKYRCEL
CRLPLRDPRQTECGHRFCEPCIRPVLSKATPACPVDNELLQPDKVFRDNCCRREILALRV
HCRNDTAGCKQIVELGKLQEHMAVCVHEAVNCPHAGCTERLLRGELVNHVALGCHFRTES
CRYCNQQVPLAEKRKHYETRCPRYPIPCPNKCEEQSIAREELVSHLGICPYKQAECFFSQ
FGCKYKGTLQGLKEHESGATQQHLSLVTARSANLELKVSMLQSQLAERANSADLLGTRVR
ELEKELISVGQTASKNESRLGHTQRMLAVQTERLLRLQESMQGTTRRADHDALRGDLDGT
AATLHELGTRVAAIEESGGSVTHSSTPTRLAALDSALSRHDTQLFAHDTRLAEMDLRFQV
LETASYNGKLVWKIRDYARRKQDAVSGRTLSLYSQPFYTSPFGYRMCARAYLNGDGVGRG
THLSLFFVVMRGEYDALLPWPFRQRVTLTLLDQGAARRQLSDTFKPDPASSSFRRPTSDM
NIASGCPLFVSHVALESASYLQDDTIFIKVVVDTGELGDP
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggctgcactgctgccaggagtcgggccttcaacccaggcctcgtcactgcacacactc
gttaaggacggcgccccgatctcctcctacctcccagccagcgtgggaggggaggcgccc
acgtgcggctaccgggaacactttgtgcacccgcccgaggacaagtaccgctgtgagctg
tgccgcctgcccctgcgcgacccccggcagaccgagtgcggccaccgcttctgcgagccc
tgcatccggcccgtgctcagtaaagcaacaccggcatgcccagtcgacaatgaactcctt
cagccggacaaggtgttccgggacaactgctgtcgccgagaaatcctcgccctccgcgtt
cactgccggaatgacaccgccggctgcaagcagatcgttgagctcggcaagctacaggag
cacatggcggtgtgtgtgcacgaggccgtgaactgcccgcacgccggctgcacggagcgg
ctgctgcggggcgagctggtgaaccacgtggccttgggatgtcacttccgtaccgaatcc
tgccgctactgtaatcagcaggtgcccctcgccgagaagaggaaacactacgagacgcgc
tgcccccggtaccccatcccgtgccccaacaagtgcgaggagcagagcatcgcgcgtgag
gagcttgtgtctcacttgggcatctgtccgtacaagcaagcggaatgtttcttcagtcaa
ttcggttgcaaatacaagggcacactccagggcctcaaggagcacgagtcaggtgccacc
cagcagcacctgtccctcgtgacggcacgcagcgccaacctggagctcaaggtgtccatg
ttgcagtctcagctggcggagagggccaacagtgcggatctgctggggactcgcgtgcgg
gagctggagaaggagctcatctccgtggggcagacggccagcaagaacgagtcacgcctc
gggcacacgcagcgcatgctcgccgtgcagacagagcggctgctgcgcctgcaggagtcg
atgcagggcacgacgcggcgcgccgaccacgacgccctgcgcggcgacctcgacggcacc
gccgccacgctgcacgagctgggcacgcgcgttgccgccatcgaggagtcggggggcagc
gtcacgcactcgtccacacccacacgtctcgccgccctggactcggcgctgagccgtcac
gatacccagctgttcgcgcacgacactcgcctcgccgagatggacctgcgcttccaggtg
ctcgagacggcgagctacaacggcaagctggtgtggaagatccgcgactacgcgcggcgc
aagcaggacgcggtgagcggccgcacgctctcgctctacagccagcccttctacacgtcg
cccttcggctaccgcatgtgcgcgcgcgcctacctcaacggcgacggcgtcggccgcggc
acgcacctgtcgctcttcttcgtggtgatgcgcggcgagtacgacgcgctgctgccgtgg
ccgttccgccagcgcgtcacgctcacgctgctcgaccagggcgcggccaggcgccagctg
tccgacacgttcaagccggacccggcgagcagcagcttccgacggccgacgtccgacatg
aacatcgcgtcgggctgcccgctgttcgtgtcgcacgtagccctggagagcgcctcctac
ctgcaggacgacaccatcttcatcaaggtggtggtggacacgggcgaactcggggacccg
tag
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