Petromyzon marinus (sea lamprey): 116950835
Help
Entry
116950835 CDS
T09614
Symbol
POLK
Name
(RefSeq) DNA polymerase kappa isoform X1
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116950835 (POLK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116950835 (POLK)
Enzymes [BR:
pmrn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116950835 (POLK)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
116950835 (POLK)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
HHH_RS2-RL21-YNQ2
Motif
Other DBs
NCBI-GeneID:
116950835
NCBI-ProteinID:
XP_032824825
UniProt:
A0AAJ7X879
LinkDB
All DBs
Position
40:complement(2050801..2066479)
Genome browser
AA seq
1089 aa
AA seq
DB search
MSSRCGVLVNIASGEDKGARGGVAGQPTPLVCGAGLRRCYSLTALAPNSVKVIRGILVFC
IYSILYIIPLSIYCWLECLSAPRPSWVLFDHTSPRRLETEDGMEGARGAVAAPGLVSCMA
LNDNKAGMEGLDKERINKVILDISKGSRFYENELKKEQQVNQKIERMLQQKGQLTDQQIR
QAELQMDSLVERLEKSRDLNRTIVHVDMDMFYAAVEMRDFPELKDKPMAVGSMSMLSTSN
YHARRFGVRAAMPGFIAKKLCPDLVICPLNFNKYSAVSKQVREVLADYDPNFLPMSLDEA
YLDITAHLAERQAWPESRRTFAAHEGLCQGRDCNGCRVAQTSSAVHNARDTNSLRVLGNG
GTAESTCDPNVSPAGGFTTNKQTDEANDGASFESYSPELFDSTPPQVGGSENAASGFGAS
ASRNGTPERSSTAVVFGLSVEEAVREMRFRIEQKTGLTASAGIAPNMLLAKVGSDMNKPN
GQYRLEPTRDAIRNFVDELPIRKVSGIGKVTEKMLNALDVFTCAHLHRQRALVALLFSEG
SCQHFLRISMGLGSTHVDRDGERKSMSTERTFSEINKQEELYNLCWELCGDLANDLSKEG
LKGRTVTVKTKSVSFEVKTRAMSLPGPVASREEIYAAAKELLKTEMDNISPQPLRLRLMG
VRLSGFVDRTEQKQKQRSISTFVQSTRSSSSRREVASPHIDVLPHGSTFGEPSTHPLSEQ
SALGSATGAVLPGQVEEESGRPEVRIKSFFQRVQAERQSQLDKQPSPMAPGPTLESAGRC
ASATRQPSPVLTANRGVDGRGGGGRPTRRGKGTVPVYTCPVCDMRQDSRSLSEFNAHIDE
CLGETEHSGFAVVGGSSGGAEWGHGLGGKDRPTRNVSLAQDDGGEPRQRACAAASGAEQN
LHRGVERRAKQTTCKTNRPPCHSEESGQACAAKDAADPKGSESKRIQLRDFNNAAVQLVD
ALGECAVPRYRQGVGGPLAEHAGDREAACAPSGTMRVPAMAGAPTCPICLCPQGSSDLVA
FNSHVDVCLNRRVIEELVGHGPGSTEAGKQPSISNGRLKRSHVGSKKSSAKRAKHSPSKP
GIERFFQTS
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccggtgcggtgtgttagtaaacatcgccagtggggaagacaaaggcgcgcgg
ggcggggttgctggccaacccacccccctcgtgtgcggcgccggccttcgtaggtgctac
tcgctaacggcgcttgcccccaacagtgttaaggttatccgggggatattggtattttgt
atatacagtatactgtatatcattcctttgtcgatctactgctggctggaatgcctctcc
gcaccgcgaccgtcttgggtgttgtttgaccatacttcaccacgccggctggagactgaa
gacgggatggagggagcaaggggagccgtggctgcccctgggcttgtgtcttgcatggcc
ctcaacgacaacaaggctggaatggaggggctggataaggagcgcattaacaaagtcatc
cttgacatctccaaggggtctcgtttttatgagaatgagctgaagaaggagcagcaggtg
aaccagaagatcgagaggatgttgcagcagaagggtcagcttactgatcagcagatccga
caagctgagctgcagatggacagtctggtggagcgtctggaaaagtcccgcgatctcaac
cgcaccatcgtgcacgtggacatggacatgttctatgccgccgtggagatgagggacttc
ccagagctcaaggacaagcccatggccgtcggctccatgagcatgctttcaacgtcaaac
taccacgcccgcaggtttggcgtgcgcgccgccatgcctggcttcatcgccaagaagctg
tgtcctgatcttgtcatctgcccactgaatttcaacaaatactccgctgtgagcaagcag
gtccgagaagtccttgccgattatgacccaaactttctaccaatgagcctggacgaggct
tacctggacatcacggctcacctggcggagcggcaagcctggcccgaaagccgccgcacc
ttcgccgctcacgagggactgtgccaggggagggactgcaacgggtgcagggtggctcag
accagctcagcggtgcacaacgcccgtgacacaaactcattaagggtgctcggaaacggt
ggcacggcggaaagcacgtgtgacccaaatgtgtcaccagcgggaggctttacgaccaat
aaacaaacagatgaagcaaacgatggtgcatccttcgagagttactcaccagaactgttc
gatagcaccccgccgcaggtcggtggaagtgaaaatgccgcgtcagggtttggcgccagc
gcgagccgtaacggaacgcctgagcgctcatcgacggcagtggtgtttgggctgagtgtc
gaggaggccgtcagggaaatgcgattccgcatcgagcagaaaacgggtctcacagccagc
gccggcattgcccccaacatgctgctggcgaaggttggcagcgacatgaataaacccaac
gggcagtaccgcttggagcccacgagggatgccatccgcaactttgtggatgagctgccg
atacgcaaggtgagcggcatcgggaaagtgacggagaaaatgctgaatgcgctggacgtg
ttcacgtgcgcccacctgcaccggcagcgagctctggtggcgctgctcttctccgagggg
tcctgtcagcacttcctgcgcatctccatgggcttgggctccactcacgttgacagggac
ggagaacggaagagcatgagcacggagaggacgttcagtgagatcaacaagcaagaggag
ctgtacaacttgtgctgggagctgtgtggagacctggccaatgacctcagcaaggaggga
ctgaaggggcgcacagtgaccgtgaagacaaaaagcgtgagttttgaggtgaagaccaga
gcgatgtcgctgcccgggcccgtggcctcaagggaagagatttacgcggccgccaaggag
ctactcaagacagaaatggacaacatctctccccagccactccgactacggctcatgggg
gtgaggctgtccgggttcgtcgaccggacggagcagaagcagaagcagcgatcaatcagc
acgttcgtacagagcacgcgcagcagcagcagcaggagggaggtcgcctcgccgcacatc
gatgtcttgccgcatggctcaacattcggcgagccgtcgactcatccacttagtgaacaa
agtgctctgggttctgctactggggctgttctgcccggccaagtggaggaggagagcgga
cgcccagaagttcgcatcaagtcgttcttccagcgggttcaggctgagcgacagagccag
ctcgacaagcagccgtcacccatggcacctgggcccacattggagtccgctgggcggtgt
gccagtgccacccgacagccctcgcccgtcttgacggcgaaccgcggcgtcgatggccgt
ggcggtggtggccgcccgacccggcgcggcaagggcaccgtcccagtgtacacgtgcccg
gtgtgcgacatgcgccaggacagcagaagcctgtctgagttcaacgcccacatcgacgag
tgcctcggtgaaaccgaacactcgggttttgctgtcgtgggcggttccagcggcggcgcg
gagtggggacacgggcttggagggaaggatcgcccgactcgaaatgtgtcgctggcccaa
gatgatggcggcgagccgaggcagagagcgtgcgccgccgcctccggtgccgagcagaac
ttgcaccgaggtgtagagcgacgtgcaaagcaaacgacgtgcaaaacaaatcgacctcca
tgccattcggaagaaagcgggcaggcgtgtgccgctaaagatgctgccgaccccaaggga
tctgagagcaagcgaatccaattgcgggattttaacaatgccgccgtccagctggtagac
gctctcggagaatgcgcggttccccgctatcggcagggtgtaggtggaccgctggcggag
cacgccggagaccgtgaagcagcctgcgctccaagcgggacgatgagagtgcctgccatg
gccggcgctcccacctgcccaatctgtctctgcccccaaggctcgtccgacctcgtggct
ttcaacagccacgtggacgtctgcctcaacaggagagtcatcgaggagctcgtgggccac
gggccagggtcaacagaggcagggaagcagcctagcatttccaacggaaggctgaaaagg
tcgcacgtcggctccaagaagtcttcagcgaaacgggcgaagcactctccatcaaaacct
ggcatcgagcgtttttttcaaacgagctga
DBGET
integrated database retrieval system
