Petromyzon marinus (sea lamprey): 116951833
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Entry
116951833 CDS
T09614
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn00052
Galactose metabolism
pmrn00510
N-Glycan biosynthesis
pmrn00513
Various types of N-glycan biosynthesis
pmrn00514
Other types of O-glycan biosynthesis
pmrn00515
Mannose type O-glycan biosynthesis
pmrn00533
Glycosaminoglycan biosynthesis - keratan sulfate
pmrn00601
Glycosphingolipid biosynthesis - lacto and neolacto series
pmrn01100
Metabolic pathways
Module
pmrn_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
pmrn_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
116951833
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
116951833
00513 Various types of N-glycan biosynthesis
116951833
00515 Mannose type O-glycan biosynthesis
116951833
00514 Other types of O-glycan biosynthesis
116951833
00533 Glycosaminoglycan biosynthesis - keratan sulfate
116951833
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
116951833
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pmrn01003
]
116951833
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116951833
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmrn04147
]
116951833
Enzymes [BR:
pmrn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
116951833
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
116951833
2.4.1.90 N-acetyllactosamine synthase
116951833
Glycosyltransferases [BR:
pmrn01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
116951833
Membrane trafficking [BR:
pmrn04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
116951833
Exosome [BR:
pmrn04147
]
Exosomal proteins
Exosomal proteins of breast milk
116951833
BRITE hierarchy
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
CHGN
Motif
Other DBs
NCBI-GeneID:
116951833
NCBI-ProteinID:
XP_032826494
LinkDB
All DBs
Position
44:complement(3224005..3240507)
Genome browser
AA seq
248 aa
AA seq
DB search
MELVVEQNEEVTLGGRYHPKDCIPRQRVAIIIPYRKRSEHLLYWLYYMHPILRRQQMDFG
VFIVHQAGDATFNRAKLLNVGTREALAIYPWDCVVFSDIDIIPMDDRNTYACGEQPRHIA
SAMDKFNFHLPYETYFGGVVSMRIKHFEAINGFSNNYWGWGTEDDDLYKRVVYKGLTVER
PPPQIARTKMIRHDRDKGNEVNTKNYDLYARTRVDMDHDGLNSLKYQLISVSMYKLYTEI
YVDIGHPD
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggagttggtggtggagcagaacgaggaggtgacactcgggggccggtaccatcccaag
gattgcatcccccgccagcgcgtcgccatcatcattccgtaccgcaagcgctcggagcac
ctgctctactggctctactacatgcaccccatcctgcggcgccagcagatggacttcggg
gtgttcatcgtgcaccaggcaggggacgccaccttcaaccgcgccaagctgctcaacgtg
ggcacgcgggaggcgctcgcgatctacccgtgggactgcgtcgtgttcagcgacatcgac
atcatccccatggacgaccgcaacacctacgcttgcggcgagcagccgcgccacatcgcc
agcgccatggacaagttcaacttccacttgccgtacgaaacgtactttggcggcgtggtc
tccatgcgcatcaagcactttgaggccatcaacggcttttccaacaactactggggctgg
ggcacggaggacgacgacctctacaagcgggtggtatacaagggcctgacggtggagagg
ccgccaccgcaaattgcgcgcaccaagatgatccggcacgatcgagacaagggcaacgaa
gttaacaccaagaactacgacctctacgcccggacgcgtgtggacatggaccacgacggc
ctcaatagcctcaagtaccagctcatctccgtctccatgtacaagctctacaccgagatc
tatgtggacatcgggcaccctgactag
DBGET
integrated database retrieval system