KEGG   Petromyzon marinus (sea lamprey): 116952205
Entry
116952205         CDS       T09614                                 
Symbol
IFT122
Name
(RefSeq) intraflagellar transport protein 122 homolog
  KO
K19656  intraflagellar transport protein 122
Organism
pmrn  Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:pmrn03037]
    116952205 (IFT122)
Cilium and associated proteins [BR:pmrn03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   116952205 (IFT122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd WD40 Zn_ribbon_IFT122 WD40_WDHD1_1st Beta-prop_EML_2 Zn_ribbon_IFT122_C WD40_Prp19 WD40_CDC20-Fz EIF3I ANAPC4_WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_Vps41 NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_RIG_2nd TPR_IF140-IFT172 Beta-prop_NUP159_NUP214 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st B-prop_COPA_B_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N TPR_IFT80_172 TPR_GEMI5 TPR_COPA_B Beta-prop_WDR75_1st eIF2A Beta-prop_IFT140_2nd zf-C3HC4_3 Beta-prop_SPT8 Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 116952205
NCBI-ProteinID: XP_032827224
UniProt: A0AAJ7XA65
LinkDB
Position
46:4434618..4466503
AA seq 1191 aa
MRAVPSWNDKAYDKDKAEQCINDLAFKPDGTQLIVAAGTKVLVYDTSDGTLIQPLKGHKD
TVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDVIQSVAYNPVSHQLASCSSS
DFGLWSPEQKSVQKHKASSRITCCSWTNDGQYLALGMFNGVVSIRNKNGEEKVKIERPGG
HPVWSICWSPSREDHHDTLAISDWGQKLSFYQLSGKQIGKDRTLGFDPCCVSYFSKGEYV
VVCGSGGRAHLYTREGVPLGPVGEHPAWVWSCRVKPDSEYVALGSQDGTVSYFQLVFSTV
HGLYKDRYAFRENMTDVIVQHLITEQKVRIRCKELVKKIAIYQHRLAIQLPEKIVIYELV
SDDTADMQYRVKQKIGRRFDCNLLVVCSKHIILCQEKRLQCLTFGGLKEREWVMESLIRY
IKVIGGPAGREGLLVGLKNGQILKIFVDNLFPIVLLKQATSVRCLDMSTSRNKLAVVDEH
NVCLVYDLRTRELLFQEPNANSVAWNTQCEDMLCFSGGGLLNIKASDLPVHQQKLQGFVV
GYNGSKIFCLHVFSMSAVEVPQSAPMYQYLERGLYQQAYQIACLGVTETDWRQLALEALE
GLDFDTAKKAFIRVRDLRYLELIYSIEERRRRGESAQELFLADVHAHRGRFHDAAKLYKR
AGHESRALTMYSDLRMFDCAKEFVASGDPKDTRLLMRKQADWAQAVKDPRAAADMYLAAG
ENVKAIEIIGQNGWVDMLVEVARRMDKADRESLALCAQHLQRLGQHGYAAEAYGKMGDWA
ALLRLHVETRHWDEAFALAERHPELRDGTFVPYARWLAENDRFEEAQKAFHKAGRRGEAV
HVLETLTHNAVAESRSNDAAYYYWMLSTQCLDIAGSDTAQAEEMLKKFEQFQHLAELYYA
YHSIQRYTDEPFTSHLPESIFNIARFLLHSLGRDSPPGISKVNTLYALAKQSRALGAYKL
ARHCFERLLALRVPPRLQEAVMLGSITIRSKPFQDSEELIPMCYRCSTNNPLLGGRGNAC
VNCRQPFVYSFSSFEVLPLVGFSLEDGVGDEEALSLINLEGPPASAGQRGDTRWRESRAG
KADMMVMENSEEAGGEANDPFAARLSFEDGAEFVPVVLNRAALRSLSRRQVLVKRWPSPL
RWQFYRSLMPDVPITVCSSCFQMFHSEDYELLVLQHNRCPYCRRPIEEMAQ
NT seq 3576 nt   +upstreamnt  +downstreamnt
atgagggccgtcccgtcgtggaacgacaaagcgtacgacaaggataaagcggagcaatgc
ataaatgatttggcgttcaaaccagatgggacacagctgatcgtggcagcaggcaccaag
gtcctggtttatgacacttcggatgggacgctgatacagccactgaaaggacacaaagac
acagtatattgcgtggcatatgcaaaggatgggaaacgctttgcctctggctcagcagac
aaaagcgtcatcatttggacgtccaagcttgaagggatcctcaaatacacgcacaatgac
gtcatccagagtgtggcctataaccctgtgagccaccagttggcctcctgttcctctagc
gactttgggctgtggtctccagagcagaagtcagtgcagaagcacaaggcttccagccgc
ataacgtgctgcagctggaccaatgacgggcagtacctggctctggggatgttcaacggc
gtcgtcagcatccgcaacaagaacggcgaagagaaggtgaagattgaaaggccagggggc
caccccgtctggtccatctgctggagcccatcgcgggaagatcatcacgacacgctagcg
atatcggactggggacagaagctgtccttctatcagctcagtggcaaacagatcggcaag
gatcgcacgctgggcttcgacccgtgctgcgtgagctacttctccaagggcgagtacgtg
gtggtgtgcggctcaggcggccgcgcacacctgtacacgcgcgagggcgtgcccctcggc
cccgtcggggagcacccggcgtgggtgtggagctgccgcgtcaagcccgactcggaatac
gtggcgctgggcagccaggatggcacggtgtcgtacttccagttggtgttcagcacggtg
cacggcctctacaaggaccgttacgccttccgcgagaatatgaccgatgtcattgtgcag
catctcatcaccgagcagaaagtgaggatccgctgcaaggagctggtgaagaagatcgcc
atttaccaacaccggctcgcgatccagctgccggagaagatcgtcatctatgagctggtg
tcggacgacaccgccgacatgcagtaccgcgtcaaacagaagatcggccggcgcttcgac
tgcaacctgcttgtcgtctgctccaaacacatcatcctctgccaggagaagcggctgcag
tgcctgacttttggcggcctgaaggagcgtgaatgggtgatggagtcactaatccggtac
atcaaggtgatcggcggccccgcggggagagaggggctgctcgtgggcctcaagaacgga
cagatcctgaagatcttcgtggacaaccttttcccaatcgtgctgctcaagcaggcgacg
tcagtgcgctgcctggacatgagcacgtcgcgcaacaagctggccgtggtggacgagcac
aacgtgtgtctcgtgtacgacctgcgcacgcgcgagctgctcttccaggagccgaatgcg
aacagcgtggcgtggaacacgcagtgcgaggacatgctgtgcttctcgggcggcgggctg
ctcaacatcaaggcgagcgacctgcccgtgcaccagcagaagttgcagggcttcgtggtc
gggtacaacggctccaagatcttctgcctgcacgtcttctcaatgtcggccgtcgaggtg
ccgcagtcggcgcccatgtaccagtacctggagcgcgggttgtaccagcaggcgtaccag
atcgcatgcctcggggtcacggagaccgactggcggcagctggcgctggaagcgctcgaa
gggctcgactttgacacggccaagaaggcttttatccgagtgagggatctcagatacctg
gagctcatctacagcatagaggagcggcggcggcgtggcgagagtgcccaggagctgttc
ctggcggatgtgcacgcccaccgcggacgcttccacgacgccgccaaactctacaagcgt
gccggccacgagagccgggctctcaccatgtactccgacctgcgcatgttcgactgcgcc
aaggagtttgtggcgtcgggcgaccccaaggacacgcggctgctcatgcgcaagcaggcg
gactgggcgcaggcggtcaaggacccccgcgccgctgccgacatgtacctggcggccgga
gagaatgtcaaggcgattgaaatcatcgggcagaacggatgggttgacatgctggtggag
gtggcgcgccgcatggacaaggcagatcgcgaatcgctggcgctgtgtgcccagcacctg
cagaggctgggccagcacggctacgcggccgaggcctacggcaagatgggggactgggcc
gccctgctgcggctgcacgtggagacacgacactgggacgaggcgttcgcgctggcggag
cggcaccccgagttgcgcgacgggacgtttgtgccatacgctcgctggctcgcggagaac
gaccgctttgaggaggcgcagaaagcgttccacaaggcggggcggcgtggggaggcggtg
cacgtgctggagacgctgacgcacaacgcagtcgccgagagtcgcagcaacgatgcggcg
tactactactggatgctgtcgacacagtgcctggacatcgccggcagtgacacggcgcag
gcggaggagatgctgaagaaatttgagcagttccagcacctggctgagctgtactacgcc
taccactccatccagcgctacaccgatgaaccgttcacatctcaccttcccgagtcgatc
ttcaacatcgcgcgcttcctcctgcacagcctggggcgagacagcccaccggggatatcc
aaagtgaacactctgtatgccctggccaaacagagccgcgcgctgggcgcctacaagctg
gctcgccactgctttgagcgtctgctggcgctgcgggtgccgccccggctgcaggaggcc
gtgatgctgggcagcatcaccattcgctcaaagcccttccaggacagcgaggagctgatt
cctatgtgctatcgttgctccaccaacaaccccttgctcggcggacgtggaaacgcgtgc
gtcaactgccgccagccgttcgtctactccttctcatctttcgaggtgttgcccctggtg
ggattctccctggaggacggagtgggcgatgaggaggccttgtcgctcatcaacctggag
gggcctcccgccagcgccgggcagcgtggggacacgcggtggcgcgaatcgcgagccgga
aaggcggacatgatggtcatggaaaatagcgaggaggccgggggggaggctaacgacccc
ttcgctgctcgactcagcttcgaggacggcgccgagttcgtgccggtggtgctgaaccgc
gcggcactgcgctcgctcagccggcgccaggtgctggtgaagcgctggccctcgccgctg
cgctggcagttctaccgctcgctcatgcccgacgtccccatcaccgtgtgctcctcctgc
ttccagatgttccacagcgaggactacgagctgctcgtcctgcagcacaaccgctgcccc
tactgccggcgccccatcgaggagatggcgcagtga

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