Petromyzon marinus (sea lamprey): 116952308
Help
Entry
116952308 CDS
T09614
Symbol
IARS1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116952308 (IARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmrn01007
]
116952308 (IARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmrn03016
]
116952308 (IARS1)
Enzymes [BR:
pmrn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
116952308 (IARS1)
Amino acid related enzymes [BR:
pmrn01007
]
Aminoacyl-tRNA synthetase
Class I (U)
116952308 (IARS1)
Transfer RNA biogenesis [BR:
pmrn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
116952308 (IARS1)
Prokaryotic type
Other AARSs
116952308 (IARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Chorion_1
Plectin_PPL
DUF5835
Motif
Other DBs
NCBI-GeneID:
116952308
NCBI-ProteinID:
XP_032827428
UniProt:
A0AAJ7U1D6
LinkDB
All DBs
Position
46:complement(6159573..6213968)
Genome browser
AA seq
1265 aa
AA seq
DB search
MVQPVPEKINFAEEEERILALWTELDAFQESLKQSKSRPQYTFYDGPPFATGLPHYGHIL
AGTIKDVVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKMLNIKGPEDVAKMGIVEYNNQC
RNIVMRYAKEWETTVIRLGRWIDFKNDYKTLYPSFMETVWWVFRQLFDKGFVYSGVKVMP
YSTACTTPLSNFEANQNYKDVTDPAVIVSFPLLEDESVSLIAWTTTPWTLPSNLSVCINP
ELIYVRVKDVATGNLYILMEVRLHALYKQEDEYIVIDKFKGITLKDKRYRPLFDYFVKRA
EPGAFRVLCDGYVTSESGTGVVHQAPYFGVDDFRICLDNRVVLSDAVPICPVNATGCFTA
DVSDFAGQYVKDADKAIIKLLKERGRLVHTSSFKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVDKLVECNSQCLWVPEFVGDKRFANWLKGAHDWAISRNRYWGTPIPLWVSDDRKEVVC
VGSIEELEALTGTKISDLHRESVDNLTIPSRTGRGVLRRVTEVFDCWFESGSMPYAQVHY
PFENRRQFEDSFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPVEVVNRYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLVQNVDRLHREEGLAFLYNEQTAEPSDNIMDKWIISFAQSLIAFFKTEMAAYRLYTVV
PRLVKFVDMLTNWYVRTNRRRLKGEGGARDCQRALETLFSVLFSMCRLMAPFTPFITEFM
YQNLRHLLDPASACEKDTRSIHYLMLPLTRETLIDERIEKAVARMQSVVELGRVVRDRKT
LPVKYPLREVVVIHQDPQALEDIQLLQKYILEELNVRVLTTSTDKQRYGVILRAEPDHMV
LGQRLKGAFRSVMTAIQKLDDAQLQEFQSTGSIVVEGHELRGEDLRLMYRFEQGAGASSQ
YETHSDSEVLILLDVTPDQVMLDEGVAREVVNRIQKLRKKAHLVPSDEISVYYAVGPGGD
YLAGVVERHREFVCTTIKAPLLPFPVRAGAERIIEESMQLKGSDLQLALVRGSDNEGLLS
ALSIGPACAYVNLQFVRSGTRDVGVALLENPRGVDPLGYAGLRRLAEHLTGVGGCRLFGG
GAELTAEADLRKLSGGTVLVLAEGQAPTGQESPGVANEPACPYVNVQLLSNDNAGSARVA
TLLLRNPLGADAALAVPALVHQAAVLFSLRGRTLRLFVDAARTSELKDSADLLALGGKTL
YLATS
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagccggtgcccgagaagatcaacttcgcggaggaggaggagcgaatacttgcg
ctgtggacggagctggatgcgttccaggagagcctcaagcagtccaagtcacgcccgcag
tacacgttctacgatggtccacccttcgccaccggcctgccgcactacggccacatcctg
gcgggcaccatcaaggacgtggtgacgcgctttgcacaccagagcggcttccacgtggat
cgccgcttcggctgggactgccatggcttgcccgtcgagtatgagatcgacaagatgctg
aacatcaagggccccgaggacgtggccaagatgggaatcgtggagtacaacaatcagtgc
cggaacatcgtaatgcgatacgccaaggagtgggagacgaccgtcattcgcctgggccga
tggatcgacttcaagaacgactacaagacgctttatccatccttcatggagaccgtctgg
tgggtgttccggcagctgttcgacaaggggttcgtctacagcggggtgaaggtgatgccc
tactccacggcctgcaccactcccctctccaactttgaggccaaccagaactacaaggat
gtgaccgaccccgcggttattgtgagcttcccgctgctggaggacgagtcggtgtcactc
atcgcgtggacgaccacaccgtggaccttgcctagcaacctctccgtgtgcatcaacccg
gaacttatctacgtccgggtcaaagatgtcgcgacggggaacctgtacatcctgatggag
gtgcggctgcatgcgctgtacaagcaggaggacgagtacatcgtgatcgacaagtttaag
ggtattaccctcaaggacaagcggtaccggcccctgttcgattacttcgtgaagcgtgca
gagccgggcgcattccgcgtgctgtgcgacggctacgtgacgagcgagagcggcacaggg
gtcgtccaccaggctccctacttcggtgtcgacgatttccgcatatgcctggataaccga
gtggtgttgagcgacgcggtgcccatctgcccagtcaacgccaccggctgcttcaccgcc
gatgtgtcggacttcgccgggcagtacgtcaaggatgctgacaaggccatcataaagttg
ctgaaggaacgggggcgactggtgcacaccagctccttcaagcacagctaccctttctgt
tggaggtcagacacgccgctcatctacaaggcggtgcccagctggttcgtccgcgtggag
cacatggtggacaagctggtcgagtgcaacagccagtgcctgtgggtgcccgagtttgtg
ggagacaagcgatttgccaactggctcaagggcgcgcacgactgggccatctcccgaaac
cgctactggggcacgcccatcccgctgtgggtcagcgacgacaggaaggaggtcgtgtgc
gtgggatccatcgaggagctggaggcgctgacgggcaccaagatctccgatctgcaccgt
gagagcgtggacaacctgacgatcccgtcgcgcacgggcaggggcgtgctgcgccgcgtg
accgaggtgttcgactgctggttcgagagcggcagcatgccctacgcccaggtgcactac
ccctttgagaaccgccggcagttcgaggactcgttccctgccgacttcatcgccgagggc
atcgaccagacgcgcgggtggttttacacgctgctcgtgctctccacggcgctgttcggg
aagccccccttcaagaacgtcatcgtcaatggtctggtgctcgccagtgacgggcagaag
atgtccaagaggaagaagaattacccggatccggtggaggtggtgaatcgctacggcgct
gatgccctgaggttatacctgatcaactctcccgttgtgagggcggagaacctgcgcttc
aaggaggagggtgtgcgggatgtcctcaaggacgtcttcctgccctggtacaatgcctac
cgcttcctggtgcagaacgtggaccgcctgcacagggaggagggcctggcgttcctctac
aacgagcaaacggccgagccgagcgacaacatcatggacaagtggatcatatccttcgcc
cagtcgctcatcgctttctttaagaccgagatggccgcgtaccggctctacaccgtggtg
ccacgtctggtgaagttcgttgacatgctgaccaattggtacgtccgcaccaaccgccgg
cgcctcaagggtgagggtggcgctcgcgattgccagcgagccctggagacgctctttagt
gtcctcttctccatgtgccgactcatggccccgtttacgccgttcatcacggagttcatg
taccagaacctgcggcacctgctggacccggcctccgcttgcgagaaggacacgcgcagc
atccactacctcatgctgcctctcaccagggagactctgatcgatgagcgcattgagaag
gccgtggcgcggatgcagtcggtggtggagctgggcagggtggtgcgcgaccgcaaaacg
ctccccgtcaagtatcccctgcgggaggtggtggtcatccatcaggatccgcaggccttg
gaggacatccagttgctgcagaagtacatcttggaggagctgaacgtgcgggttctgaca
acgtccaccgacaagcaacgctacggcgtgattctgcgcgccgagccagaccacatggtg
ctgggccagaggctcaagggggccttcaggtccgtcatgactgccattcagaagctggac
gacgctcagctgcaggagttccagagcacgggcagcatcgtggtggaagggcacgagctg
cgtggagaggacctgcggctcatgtacaggttcgagcagggggccggtgcaagctcccag
tacgagacccactcggactcagaggtgctgatcctgctggacgtgacccctgaccaggtc
atgttggacgagggcgttgccagagaggtcgtcaaccgcatccagaagctacgcaagaag
gcgcacctggtgccgtcagacgagatctcggtgtactacgcggttgggccgggcggggac
tacctggcgggcgtggtggagcgacaccgggagtttgtgtgcaccaccatcaaggctcca
ctgctgcccttccctgtgcgtgccggtgccgagcgcatcatcgaggagagcatgcagctc
aagggctcggacctgcagctggcgctggtgcgagggagcgacaacgagggcctcctgtcg
gctctgtccatcggccccgcctgcgcctacgtcaacctgcagtttgtgcggagcggcact
cgcgacgtgggggtggcgctgctggagaaccctcgtggagtcgaccccctgggctacgcg
ggactgcggcgcttggcggagcacctcaccggggtcggtggctgtcgcctgttcggcggg
ggcgccgagctgacggcagaggcggacctgcgcaagctgagcggtgggactgtgcttgtg
ctggccgaggggcaggctccgacggggcaggagtcaccgggggtcgccaacgagcccgcg
tgtccctacgtcaacgtgcagctcctgagcaacgacaatgcagggagtgcgcgcgtggcc
acgctgctgctgcggaaccctctcggcgccgacgccgcgctcgccgtgccggcgctcgtc
caccaggcggccgtgctcttctccctgcgcggtcgcaccctccgcctcttcgtcgacgcc
gcacgaaccagcgagctcaaggactcggctgatttgctggcgctcggaggcaagacgctg
tacctggcgacctcgtaa
DBGET
integrated database retrieval system
