Petromyzon marinus (sea lamprey): 116956877
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Entry
116956877 CDS
T09614
Symbol
PDGFA
Name
(RefSeq) platelet-derived growth factor subunit A
KO
K04359
platelet-derived growth factor subunit A
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04010
MAPK signaling pathway
pmrn04020
Calcium signaling pathway
pmrn04510
Focal adhesion
pmrn04540
Gap junction
pmrn04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116956877 (PDGFA)
04020 Calcium signaling pathway
116956877 (PDGFA)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116956877 (PDGFA)
04540 Gap junction
116956877 (PDGFA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116956877 (PDGFA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pmrn04052
]
116956877 (PDGFA)
00536 Glycosaminoglycan binding proteins [BR:
pmrn00536
]
116956877 (PDGFA)
Cytokines and neuropeptides [BR:
pmrn04052
]
Cytokines
Growth factors (RTK binding)
116956877 (PDGFA)
Glycosaminoglycan binding proteins [BR:
pmrn00536
]
Heparan sulfate / Heparin
Growth factors/receptors
116956877 (PDGFA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
116956877
NCBI-ProteinID:
XP_032834627
UniProt:
A0AAJ7UE57
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All DBs
Position
3:complement(20902171..20928479)
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AA seq
211 aa
AA seq
DB search
MGFRAGLVWLLCSQCLVRAEQAQDTSLPRELLDMLAHADIRSIGDLQRLLEIDSVERPGS
MPASVRARGVEPGAAGNRSRAARSVRSLAEEATAAVCRVRPVSLEIPRSQIDSTSANFLV
WPPCVELPRCSGCCNTHSVRCQPSRTRHKYVKVAKIEYVKRRTLLKEALVKLEEHLDCTC
GCLAGHGDCRDSDGPNESQHCQDGLCGKGVR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgggatttcgagcggggctcgtgtggctgctgtgctcccagtgtttggtgcgcgccgag
caggcgcaggacacgagtctgccccgcgagctgctggacatgttggctcacgcggacatc
cggagcatcggtgacctgcagcgcctcctggagattgactccgtagagcggccgggttca
atgccggcgtccgtgcgggcgcgcggcgtggagcctggagcggcggggaaccggtcgaga
gctgcccgctccgtacggagcctcgccgaggaggcgacggcggccgtgtgccgcgtgcgg
cccgtctccctggagatccccaggtcccagatcgactcgacgtcggccaacttcctggtg
tggccgccctgcgttgagctgcctcgctgctcgggctgctgcaacacgcacagcgtgcgc
tgccagccgtcacgcacgcgccacaaatacgtgaaggtggccaagatcgagtacgtgaag
cgacgcactctcctcaaggaggccctcgtcaagctggaggagcacctcgactgcacgtgc
ggctgccttgccggacacggggactgccgcgacagcgacggtcccaatgaatctcagcac
tgccaagacggcctctgcgggaaaggtgtcagatga
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