Petromyzon marinus (sea lamprey): 116957122
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Entry
116957122 CDS
T09614
Symbol
RB1
Name
(RefSeq) retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04110
Cell cycle
pmrn04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116957122 (RB1)
04218 Cellular senescence
116957122 (RB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmrn01009
]
116957122 (RB1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116957122 (RB1)
Protein phosphatases and associated proteins [BR:
pmrn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116957122 (RB1)
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
116957122 (RB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
Rb_C
DUF3452
Motif
Other DBs
NCBI-GeneID:
116957122
NCBI-ProteinID:
XP_032834976
UniProt:
A0AAJ7UGU0
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Position
70:complement(999342..1229780)
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AA seq
979 aa
AA seq
DB search
MMSLKEGGEHDSSTASLVSGSSGGGSASSSSSDGEEDGWRRKLEKVCVAVGATDETCKMA
WRLWELTCKPDSAQSCAPTLAVCLYIAAMKPLPIKVTQLLSELGVSFDDFYHAVRNMDAP
SEMQLSLTTLNNQFQVVAAIYKKFQTMYGKIFNEDCGRCASPFPSTMAKECWTTFILAKG
HGLQAGTDLVSAFHLLLCVLDHFVSRCQASSLHEPYASAVRDGKPASGTDGEADPAASSG
EHSYSQGTAAAVTTAAAAKTPAVAVAPPVVALLCRHNNCNHEEVMSIHTGCFLPFLSSLP
ATTTDSLLQLLSEQYGALYEQTRGIDERGFLVHHPTLVPNADKQPQALGSPTRSQDAMLG
PQQTPIRTTMNTVQQLKLILNSASDEPSTTLNSYLSRCSVNPRAEIARTVEEVGSRFQRN
FVEATSAGCAGTANQRWGLAVRLYYRVMEAILKSEEERLNMQDFSTLLGIETFHVSLLAC
SLEVVMATYNSSWSGSCGTMIGSPEDSGGVSFPWVLGVLSLSPYNFYKVLESFIRAETSL
TRDVIRHLRCCEEAVLDSLAWQPDSPLLEELRNCRDGVQAGTDAAPDPHGAGINPGINPG
INPGINPGINPGINPGINAAHALPRGSLSPVHRPPAAATPSADEPTAAPSADQPAAAAAA
AAAQPAAQPAAPAGVASPLFRHRRSSLLFLKKVCCLAHQRLKQLCTDVHLLPGHAVQELT
IWTLLEHTVRNEPDLMAGRHLDQIMMCAIYAICKVHNIDLKFKTIVTAYKGMPHAKQQTF
KHVLIRENQYDSIIVFYNLVFMQRLKANILQFVSPHPPTLSPIPSAMLSPSSFRASPLRV
LGRSNFYISPLKSPARSPASVPLTPKSRLLVCIGETIGSPQFQRINAVIGASDRGRGAKR
RLVEEGGSKRLLFDCGEAGADEADGAKAHNGSRDALATNGRSRSIIHRKVSELAFAFQRT
RKGGGDHNGDGGGADGHDK
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccctcaaggaaggtggtgaacacgacagctcgaccgcttcgctcgtcagcggc
agcagcggcggcggcagcgccagcagcagcagcagcgacggtgaagaggatgggtggcgg
aggaagctggagaaggtttgtgtggctgtgggcgccaccgatgagacgtgcaagatggcc
tggaggctctgggaattgacatgcaagcccgactctgcgcagagctgtgctccgacgctg
gccgtctgcctttacatcgccgccatgaagccattgcccatcaaggtcacgcagcttctc
tccgagcttggtgtcagcttcgacgatttctaccacgccgtgcggaacatggatgctccg
tcagaaatgcagctatcgctcaccaccctgaataaccagttccaggtcgtcgccgccatc
tacaaaaagttccaaacgatgtacggcaagatcttcaacgaagactgcggacgatgcgcc
tcgccgtttccgtccacgatggcaaaggagtgctggacaacattcatcctcgccaagggc
cacgggctccaggccggcacggatctggtctcggcgttccatctcctgctgtgcgtcctg
gaccactttgtctcccgctgccaggcctcgtctctccacgagccctacgcgtccgccgtg
agggacggcaaaccggcgtccggcacggacggagaggctgacccggcggcttcgagcggc
gagcactcgtacagccagggcaccgccgccgctgtgaccacggccgccgccgcgaagacg
cccgcggtggccgtggctccgccggtcgtcgcgctgctgtgccgtcacaacaactgcaac
cacgaggaggtcatgagcattcacaccggctgtttcctccccttcctaagctctctccca
gctaccacgacagactccctcctccagctgctgagcgagcagtacggggcgttgtacgag
cagacgcgtggcatcgacgagcgaggcttcctcgttcaccaccccaccctggtgcccaac
gccgacaaacagcctcaggctctaggcagcccaaccaggagccaggatgcaatgctggga
ccgcagcagacgccaatcaggaccacaatgaacacggtccagcagctgaagctcatcctg
aactcggcgagcgatgaaccatccacgacgctcaacagctacctaagccgctgctccgtg
aacccccgggccgagatcgcgcgcacggtggaggaggtgggctcccgcttccagaggaac
ttcgtggaggctacgtccgccggctgtgcggggaccgccaaccagcgttggggccttgcc
gtgcgtctctactaccgcgtcatggaggccatcctgaaatcggaggaagagcggctgaac
atgcaagatttcagcaccctactgggcatcgagacgttccacgtgtcgctgctcgcctgc
tcgctcgaggtggtcatggcgacgtacaacagctcctggagcggctcgtgtggaacgatg
atcggctccccggaggattccggcggcgtctccttcccctgggtgctgggagtcctctcg
ctgtcgccctacaacttctacaaggtcctggagagtttcatccgcgcggagacgtcgctc
acccgcgacgtcatcaggcacctcaggtgctgcgaggaggccgtgctggactccctcgcc
tggcaaccggactctcccctgctggaggagctcaggaactgcagggacggcgtccaggcc
ggcacggacgcagcgccggatccgcacggcgccggcatcaaccccggcatcaaccccggc
atcaaccccggcatcaaccccggcatcaaccccggcatcaaccccggcatcaacgcggcg
cacgccctgccgcgtggctccctgtcccccgtgcaccgccccccagctgcggcgactccc
tctgccgacgagccgacggcggccccctcggccgaccagccggcggccgcggccgcggcg
gcggcggctcagccggcggctcagccggcggctcctgccggcgtcgcctctccgctgttc
cgtcaccgcaggtcctcgctgctgttcctcaagaaagtgtgctgcctggcccaccaacgt
ctcaagcagctgtgcacggatgtgcacctgctgcccggccacgcagtgcaggagctcacc
atctggaccctgctggaacacacggtgcgcaacgagcccgacctcatggccggacgccac
ctggaccagatcatgatgtgtgccatctacgccatctgcaaagtgcacaacatcgacctg
aagttcaagaccatcgtcacggcctacaagggcatgccccatgccaagcagcagactttc
aagcacgtgctgattcgggaaaaccagtacgactccatcatcgtcttctacaacctcgta
ttcatgcagcggctcaaggccaacattctgcagttcgtgtctccacaccctcccacgctg
tcccccatcccgtcggccatgctgagcccatcctcgttccgggcgtccccgctgcgcgtc
ctgggccggagcaacttctacatctcccctctcaagagcccggcacgctccccagccagc
gtccccctcacccccaagagcaggctactcgtctgcattggagaaaccatcgggtccccg
cagtttcagaggatcaacgcggtgatcggcgccagcgaccgtgggaggggggcaaagcga
cgcctggtggaggagggggggtccaagcggctgctcttcgactgcggcgaggccggcgcg
gacgaggcggacggcgccaaagcgcacaacggctcgcgcgacgccctcgccaccaacggg
aggagccgctccatcatccaccgcaaagtgtccgagctggcgttcgctttccaacgtacg
aggaaaggcggcggcgaccacaacggcgacggtggtggtgccgacggccatgacaagtga
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