Petromyzon marinus (sea lamprey): 116957284
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Entry
116957284 CDS
T09614
Name
(RefSeq) PHD finger protein 1-like
KO
K11485
metal regulatory transcription factor 2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116957284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116957284
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116957284
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
116957284
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
116957284
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCL_mid
Mtf2_C
PHD_UBR7-like
PHD_ash2p_like
PHD
ASH2L-like_WH
DUF2368
Motif
Other DBs
NCBI-GeneID:
116957284
NCBI-ProteinID:
XP_032835224
LinkDB
All DBs
Position
72:complement(1561561..1629976)
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AA seq
645 aa
AA seq
DB search
MVRGPNIPVERHQQHQQHQQQHQQQHQQQIQQQHQRQLQQQRRQNRLHVGSERRGLVWTA
ACPSPGPPHLGTEVTVRSGGDALHTGTVRQVRRGMESCLIRFQDGSECWVLWKDIHSGSD
HCSRADNGGDDGDGGDGDNDGGDGDNAPTSQRRMRRRQRRLSTSLTSSLPSPTSSAAAAS
TSAAAAAATTTWKYRDSQGHGALPYDPGALQWDSAHSTNAQQRYCYCGGRGEWTMKMLQC
GSCLQWFHEGCVACVDTPLLYGDRFYSFVCALCNGGSEILRRLPLTWGDVAHLALYSLSV
EKRRKYFGFDQEIVPFVNREWSRLQCGELAGTPLATRADKLLQALSHERLRFASGQEIKK
KKTLFGLRIRAPPSPPPPARPPPSLTGTTRGHGEDAGARRHKRRLTSSINSRLSKKCSIR
DTTPPPSPPPPPPPPPSSPPPPASNHHPPPLAKTASHTRTHAHAHTRTHAQTRTHAHTRT
HAHTRARPSQQHQQRHLQIRLKKDMDLDSELPVNSFACSTRHVDKTRISSSRSSSRSSRR
SRRRERSPALSPAPPPLTLTPPLTLTPPLAAVRPPPPSPVPASPPVPARDRPCLCVSLDV
PAPPALALGGSLGRLACGERFVVRGRRTSPDGSTHYLVEWLGRTA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggtccgaggccccaacatccccgtggaacgacatcaacaacatcaacaacatcaacaa
caacatcaacaacaacatcaacaacaaatacagcaacaacatcaacgacaactacagcag
cagcggcggcagaaccgacttcatgtcgggtcggagaggcggggcctggtctggaccgca
gcctgcccctcgcctgggcccccgcacctcggcaccgaggtgacggtgcggagcggcgga
gacgccctgcacacaggcactgtacgccaggtgagaaggggaatggagtcatgtcttatc
aggttccaagatggatcagagtgttgggtcctctggaaagacattcactctggctccgac
cactgctcccgtgctgacaatggtggtgatgatggtgacggtggtgatggtgataatgat
ggcggtgatggtgataatgcgccgacatcacagaggaggatgaggaggaggcagagaaga
ttgtcaacgtcgttaacatcatcgctgccatcaccaacatcgtcagcagcagcagcatca
acatcagcagcagcagcagcagctacaacgacatggaagtatagagattcacagggtcat
ggtgctctgccctacgacccaggcgccctgcagtgggactcagctcacagcaccaacgcc
cagcagcgctactgctactgtggggggcgcggagagtggaccatgaaaatgttgcagtgt
ggttcgtgtcttcagtggttccacgagggatgtgtggcctgcgtggacactccgctgctc
tacggagacaggttctattcgtttgtctgtgctctgtgcaatggagggtctgaaatccta
cgaagacttccgctcacctggggcgacgttgctcaccttgccctctactcgctcagcgtg
gagaagcgccggaagtacttcggcttcgaccaggagattgtccccttcgtcaaccgggag
tggagccggctgcagtgcggagagctggcaggaactccgctagcgacccgcgcagacaaa
ctcctccaggctctctctcacgagcgtctacgtttcgcttccggtcaggagattaagaag
aaaaagactttgttcggactccgaatccgagctcccccatcaccccctcctcccgcccgt
cctcctccgtctctgacggggacgacgcggggacacggggaggacgcgggggcacggaga
cacaagaggagattgacaagttccatcaattctcgtctgagcaagaaatgctccatcaga
gacaccactcctcctccctctcctcccccgcctcctcctcctccaccctcttctccgcct
cctcccgcctcgaatcatcatcctcctccgctcgcgaagacagcatcccacacacgcaca
cacgctcacgcgcacacacgcacacacgcacaaacacgcacacacgcgcacacacgcaca
cacgcacacacacgcgcgcgcccatctcaacagcaccagcagcggcatctgcagatacgg
ctgaaaaaggatatggatctggactctgaactcccagtcaactccttcgcctgctccaca
cgccacgtggacaagacacgcatcagcagcagcaggagcagcagcaggagcagcaggcgg
agccggcggagggagcggtccccggccctctcaccagcgccaccaccgctcaccctcacc
ccaccgctcaccctcaccccaccgctcgcggccgtgcggccgccgcctccgtcccctgtg
cccgcgtccccgcccgtccccgccagggaccggccgtgtctctgcgtgtctctggatgtc
cccgcgcctccggccctcgccctcggcggctcgctcggccgcctggcctgcggcgagcgg
ttcgtggtgcggggccggcggacgtcgccggacggctccacgcactacctggtggagtgg
ctgggacgcaccgcctag
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