Podarcis muralis (common wall lizard): 114581534
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Entry
114581534 CDS
T06059
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03440
Homologous recombination
pmua03460
Fanconi anemia pathway
pmua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114581534 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
114581534 (BRCA1)
03460 Fanconi anemia pathway
114581534 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmua01009
]
114581534 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmua04121
]
114581534 (BRCA1)
03036 Chromosome and associated proteins [BR:
pmua03036
]
114581534 (BRCA1)
03400 DNA repair and recombination proteins [BR:
pmua03400
]
114581534 (BRCA1)
Enzymes [BR:
pmua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114581534 (BRCA1)
Protein phosphatases and associated proteins [BR:
pmua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114581534 (BRCA1)
Ubiquitin system [BR:
pmua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114581534 (BRCA1)
Multi subunit type E3
BRCC complex
114581534 (BRCA1)
Chromosome and associated proteins [BR:
pmua03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
114581534 (BRCA1)
DNA repair and recombination proteins [BR:
pmua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
114581534 (BRCA1)
BRCA1-A complex
114581534 (BRCA1)
BRCA1-B complex
114581534 (BRCA1)
BRCA1-C complex
114581534 (BRCA1)
BRCA complex
114581534 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
114581534 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-Nse
BRCT_2
zf-RING_6
RING_XB3-XBAT31
Prok-RING_4
U-box
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
114581534
NCBI-ProteinID:
XP_028557582
LinkDB
All DBs
Position
13:complement(10875753..10931332)
Genome browser
AA seq
1683 aa
AA seq
DB search
MDSSIPSIAEVRGILLAMQKNLECPICLEVMKEPVSTNCAHIFCSFCMFKLLKQKKGAVR
CPLCNAKVTKRSLWEDVRFKQVIKVVLEAIRAFEHDTGLKFSDDLCFPKKALEDASASVS
WQEKQVIDCKGYRDRLKRVKEVKKRNAGLEGETSSLPLDGGTRRSLRKKNNSSKAAVFEI
GSDSSEDAFKKTDTIRCVSLRRNYPARVDEGCAKNESPSPFHMEFSELSAEDETPLNILG
VCDYLEEPGNTEGASIGKLEIPEKNAAVEKSQGLSSPDPCLGKHDRNSNSMSEGGSCSLL
NMAQLADEATKPTADKQAGHDAGNVSTGLPSGHKHVLCENEEQLLQSQTSPERPLSQVSG
KKLIRSIQKVKAWLSKSKEGLSPRSLQDTHAQEVDQDPDLSDGDSLVSQKTEQIGYQKVF
TVECEGDRYLPKPVASKAEDKLFGRTYKRKRKSTPLWNKRETVCIQAKEGIAMNTESCDA
PVKRLSRKRKATSELLPDDFIRRQDGEVNSRRPGGDEDTALEEGGQAPALVVDSPVADQK
EVELPTEFPAKEGLSVLETDLNEPSQSICLKSPESNRNHLKKKSNTLSKIRRQLIKPVGE
LQLMMDRSSRSPEKAKIQTDDKLREVGTSQVRVRRSRRLQFSTEDAWRRSEPVKRGRKQL
DKRETKKRRWSYEENTPTPSIAENYPSVLQGRLQKGVSLSDTSLMDVEGDASKACANPPA
SPQVGVEQTTEGSSPCCIVPSASSQDSCSLLHFASPEVEQTTSEDKQLTVAHQTEKNVLC
TQKLEGDEFCTGDMMRSCKPPETNDEAAGTLELNSETEDSELDTNFMQKIFNGCKRQSFL
LHPVKESAAEIQKETRISLGEDGKVDCLKKSTCIDKFCEEKRDAVACEVNSSVQRLASCA
TSFPDHERRTEHPQLASQTAFPDQLATKNPYSPQQSQKPVTKKSMSPQIRAEVANSNNSS
SSGSPNVWRNVIIHSTSLSGINETRSSINNSEDAESESTKNKGLALNSQPEFMQPCPVIC
QLPHSEFSGVHGEKNSPMEQKQLHSDTEEATNNCSTGTPKCLVHSNNLEQCAEEEYHGFE
VSSETPEGLLGPVIRSIEGSPNLGEMERNDSLAMSPGRDEQTPLKGDLGSGNGRSSRLSH
KGLVRTQQRWARKLPSSEEDSSEDEELPSFQALIFGKSASTPLDPLKKKKTSGGMPALKS
SNKCSVETKEEHVCPSQGSECSMKLFSSQSHTAEDFRSRPQDSRHLTPAPTSRENLESLS
GNKKAAQPRDEVSKDAGQQKDEQQEQVDSEFNLGEETLDYDSEASCLGDSSGLSSQSEIL
TTQQKNAMQNSLKKLQQKMAILEAVLKQGSQSAVHEGSLLPGEEGDFTGGQTKSARGSKA
DLSSESKQSLQGAFSTPVRNMRGTPGSSKSKEQTSSLLAAETAMGPPSATHDAGRQRALR
HSAQGSPVCPLSRITHCSTSKGNSERPFVTSKKNMSLVASGLNQGELRLVQMFARKNEST
WSNKISYETTHVVMKTDEDLVCERTLKYFLGIAGRKWVVSYHWVVQSLKERRVLNEEDFE
VRGDMINGRNHQGPKRARESPVGKLFQGLEICCYGPFTDMLPEQLEWMVELSGASIVKEP
RLFSHSTNSTAVVVVQPEAWSEDTACQGIPPQCSATVVSREWMLDSIACYQRQAFDEYIV
QQV
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggattcctctattccaagcattgcggaggttcgtggcatattgctggctatgcagaag
aacttggaatgcccaatatgcctggaggtaatgaaggagccagtctcaacaaactgtgcc
cacatcttctgcagtttctgcatgtttaagctccttaaacagaagaagggtgcggtacgg
tgtccactttgcaatgccaaagtcaccaaaagaagtctatgggaagatgtccgatttaag
caagtaatcaaagtggtgctggaagccatccgtgcttttgaacatgatacagggctcaag
ttttcagatgatctgtgtttccctaagaaagctttagaagatgcttctgcttctgtttca
tggcaagaaaaacaagtcattgattgcaaaggctacagggacagactgaagagagtgaag
gaagtgaaaaagagaaatgctggcttggaaggtgagacctccagcttgccattagatggt
ggaacaaggcgctccctgagaaagaaaaacaattccagtaaagccgctgtgtttgaaatc
ggatcagactcttctgaagatgcatttaagaagacagatacaatcagatgtgtgagttta
agacgtaattatccagctcgagttgatgaagggtgtgccaagaatgaaagcccaagccct
tttcacatggagttttctgagctgagtgctgaagatgagacaccattaaatatcctaggt
gtatgtgattatttggaagaacctggaaacacagaaggagccagcattggaaagttagaa
attcctgagaagaatgctgctgtggaaaagagtcagggtttgtcttctccagatccctgc
ttgggtaaacatgacaggaactccaattccatgtcagagggtggttcttgctctttactc
aatatggcacaattggctgatgaagccacaaagcccactgcagataaacaggctggtcac
gatgcaggaaatgttagcacggggctgccttctggacataaacatgtcctgtgtgaaaat
gaggaacagctactgcagtcacaaacttcccctgaacgtcctctgagtcaagtctctggg
aagaaactgatacggagcatccagaaagtcaaagcatggctgtctaaaagcaaggagggt
ctttctccaagatccctgcaagatactcacgcacaggaggtggatcaagatccagacttg
tcagatggagactctctggtctcccagaagactgaacagattggataccagaaagtcttc
acagtggaatgtgaaggtgacaggtatttgcctaagccagttgcctctaaagctgaggat
aaactatttgggagaacatacaagaggaaacgcaaatcaacccctctttggaataagagg
gaaacagtttgtatccaagcaaaggaaggcattgctatgaatacagaatcctgtgatgca
cctgtaaaaagattatcgcgaaagaggaaggctacatcagaattgctaccagatgacttc
attaggaggcaagatggggaagtaaatagtaggaggcctggtggagatgaagatactgct
ttggaagaaggtggccaagctcctgctcttgtagttgatagccctgtggcagatcaaaag
gaagttgagctaccgactgaatttcctgccaaggaagggctgtctgttttggaaactgat
ttaaatgaaccatctcagagtatatgcctgaaatcgccagaatcaaaccgtaaccatcta
aagaagaaaagtaacactttgagcaagatacgtagacaattaatcaagcctgttggtgaa
ttgcagttaatgatggacagaagctccaggtcccctgagaaggcaaagatacagactgat
gataagttaagggaagttggcacaagccaggtgcgagtcagacggagcagaaggcttcag
ttctcgacagaagacgcctggaggagaagtgagccggtaaagcgaggaaggaaacagttg
gataagagagaaacaaagaagcgtaggtggtcttatgaagaaaacacgccaacgccttcc
atagcagaaaattaccccagtgtgttgcagggcaggctccaaaagggtgtgtctttgtca
gataccagcctgatggacgtggaaggggatgcaagtaaagcttgtgctaaccctccagct
tctcctcaggtaggtgttgaacaaaccacagagggcagcagtccttgttgcattgttccc
agtgcaagttcccaggacagctgctcacttctgcattttgcttctccggaggtggagcaa
accacttctgaggacaaacagctcacagtagcacaccagacggagaagaatgtgttatgt
acccagaaactagagggcgatgagttttgcacaggggatatgatgagaagctgtaaaccc
cctgaaacaaatgatgaagctgcaggaactttggagctgaactcagaaactgaggacagt
gaactggatacaaacttcatgcagaagatattcaatggctgcaaacgccagtcattcttg
ttgcatccagtaaaggaatctgctgcagaaattcaaaaagagacacgcattagcttgggg
gaagatggcaaggttgactgtttgaagaaatcaacttgcatcgataaattttgtgaggag
aagagagatgctgttgcctgtgaggtgaacagctctgtccaaagattggcatcttgtgct
actagtttccctgatcacgagaggagaactgagcatccccagcttgcctcacaaactgcg
ttcccagatcaattagccaccaagaatccttacagtccccagcaaagtcaaaagccagta
actaaaaagagcatgtcccctcaaattagggcagaagttgcaaactcaaataacagcagc
agcagtggaagcccaaatgtctggagaaatgtcatcatccacagcaccagtttaagtggc
attaatgagacacgttctagtataaacaactctgaagatgcagaatctgaaagcactaaa
aacaaagggctggcattaaactctcagccagaattcatgcagccatgtcctgtaatttgt
cagctaccacattctgaattcagtggcgtccatggtgaaaagaatagccccatggaacaa
aagcaactgcatagtgacacagaagaagcaaccaataattgcagtacaggcactcctaag
tgcttggttcacagtaataatttggaacagtgcgctgaggaggagtaccatggctttgag
gtgtcctcggagacaccagagggcttgctaggccctgtcatcagaagcatagagggctca
cctaaccttggggaaatggagaggaatgatagcttggccatgtctcctggcagagacgag
caaaccccacttaagggagacctgggtagtggcaacggaagaagttccaggctgagccat
aaaggcctcgttcgcacgcagcagagatgggcacggaagctgccgtcctcggaggaagat
tctagcgaagatgaagagttgccatcttttcaggcactgatatttggtaaatcggcaagc
acaccgctagacccactgaaaaagaagaagacatcgggagggatgccagcactgaagagc
agcaacaaatgtagtgtagaaaccaaggaggagcatgtctgtccaagtcagggttcggag
tgctccatgaagctgttttcttcccagtcacacacagctgaggatttccgcagcaggcct
caggactcaagacacttaactccagctcccacttctagagaaaatctggaaagtcttagc
gggaataaaaaagccgctcagcccagggatgaagtctcaaaagatgctggacaacagaaa
gatgaacagcaagaacaagtggattcagaattcaatttaggtgaagagaccttggactat
gacagtgaagctagctgcttgggggattcatcaggcctatcttcccagagtgagattctc
accacacagcaaaaaaatgccatgcaaaacagcttaaagaaactccagcagaagatggct
attcttgaagcagttctcaaacagggaagccagagtgctgtccatgaaggatcactgctt
cctggtgaggaaggtgatttcactggaggacagacaaaatcagcaaggggaagcaaagca
gatttgagttctgaaagtaaacaaagcctccaaggtgccttttctacccctgtgagaaac
atgcgagggactccagggtcctcaaagtctaaagagcagacttccagccttttggccgca
gagacagcaatggggcctccttctgccacacatgatgcaggaaggcaacgtgcattgagg
catagtgcacaaggaagtccagtctgccccttgtcacgaatcacacattgtagcacaagc
aaagggaattcagagaggccatttgtgacaagcaagaagaatatgtctctggtggcctcc
ggtctgaaccagggcgagttgcgactagtacagatgtttgccaggaaaaatgagagcact
tggtctaataagatttcttatgaaacaactcatgtagtaatgaaaacagatgaggatctg
gtttgcgagcggaccctgaaatacttcctaggtattgctggacggaagtgggtggtgagc
taccattgggttgtacagtcactgaaggaaagaagagttcttaatgaggaggactttgaa
gttagaggagacatgatcaatgggagaaaccatcaaggacccaaaagagcaagggaatct
cccgttggaaagcttttccaaggcttagaaatatgctgctatgggccattcactgacatg
ctcccagaacaattggagtggatggtagagctgtccggtgcctctattgtgaaagaacct
cgcttattctcacattcaacaaactctactgctgtggtggtcgttcagcctgaagcttgg
agcgaagacactgcctgccaagggatcccaccgcaatgcagtgctactgtagtctcacga
gagtggatgctggacagtatcgcatgctatcaacgccaggcatttgacgaatacatcgtg
caacaggtgtga
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integrated database retrieval system
