Podarcis muralis (common wall lizard): 114583728
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Entry
114583728 CDS
T06059
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04620
Toll-like receptor signaling pathway
pmua04621
NOD-like receptor signaling pathway
pmua04622
RIG-I-like receptor signaling pathway
pmua05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
114583728 (TRAF3)
04621 NOD-like receptor signaling pathway
114583728 (TRAF3)
04622 RIG-I-like receptor signaling pathway
114583728 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114583728 (TRAF3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF3_RING
zf-TRAF
Cast
zf-C3HC4
ATG16
FliJ
Spc29
Med28
MPS2
Tropomyosin
GAS
KxDL
DUF1664
Sina_ZnF
Crescentin
T3SSipB
DUF3450
SPATA24
BLOC1_2
ADIP
Motif
Other DBs
NCBI-GeneID:
114583728
NCBI-ProteinID:
XP_028561011
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Position
1:complement(15739075..15779687)
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AA seq
566 aa
AA seq
DB search
MDASKKADPPVSVELVQKANPDRSPVPSIYVPEQGGYKEKFVNAVEDKYKCEKCHLILCN
PKQTECGHRYCETCMNALLSSAIPKCTACQETIVKDKIFKDNCCRRELLALQIFCRNENK
GCREQLTLGQLLTHLRNDCLFEELPCPRADCKEKILRRDLPDHVEKTCKYRETTCKYCKN
QVPMIMIQKHEDADCPCVMVTCPHKCSVSALLRKELNAHLSECINAPSTCSFKRYGCIFQ
GTNQQVKAHEATSAVQHVDLLKEWSNCLENKVAMLQNESLEKNKSIQTLHNQICSFEIEI
ERQKEMLRSNESKIHHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVT
ELESVDKNAGQGNRNAGMLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGILIWKI
RDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEY
DALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTV
LENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaagcaagaaagcagatcccccggtgtcagtggaactggtccaaaaggcaaac
cccgaccgcagcccagtgccatccatttatgtgcccgaacaaggtggctacaaagagaaa
tttgtgaatgcggtggaggacaaatacaaatgcgaaaagtgccacctcattttgtgcaat
ccaaagcagacagaatgtgggcatcggtattgcgagacctgtatgaatgctttgctaagc
tctgcaattccaaaatgtacagcatgtcaagaaacaatagtgaaagataagatatttaaa
gataattgctgtcggagggagcttcttgcccttcagatattctgcaggaatgaaaataaa
ggttgcagagaacaattgaccttgggacagttgcttacccacctgagaaatgactgtctg
tttgaagagcttccatgccctcgggctgattgcaaggagaaaatactgcgaagagacttg
ccagaccacgtagagaagacctgtaaatatcgggaaacaacgtgtaaatactgtaaaaac
caagtcccaatgattatgatacagaaacatgaagatgcagactgcccttgcgttatggtc
acgtgtcctcataaatgtagcgtttcagcgctcctgagaaaagagttgaatgcacatttg
tcagaatgtattaatgccccaagcacctgtagttttaagcgttatggctgcatttttcag
ggaacaaaccagcaagttaaagcacatgaagccacctcagcagtgcagcatgtagactta
ttgaaagagtggagtaattgtctagaaaataaggtggccatgctccagaatgaaagtttg
gaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaaatt
gagagacagaaggaaatgttgcggagtaatgagtccaaaatacatcacttacagcgagtg
atagacagccaagctgagaagctgaaagaactggacaaagagatccgtcccttccgacag
aactgggaggaggcagacagcatgaagagcagcgtcgagtctctccagaacagagtgact
gagctggaaagcgtcgataagaatgccggtcaaggaaataggaatgcaggtatgctagaa
tcccaattatctaggcatgatcagatgctgagcgtccacgacatccgattggctgatatg
gatctccgctttcaagttttggaaacagccagctacaatggaatattgatctggaaaatc
cgagattataaacgtcggaagcaagaggcggtcatggggaagacgttgtccttatacagt
caacctttttatacggggtacttcggctataagatgtgtgccagagtttatctcaacgga
gacggcatggggaaagggacgcacttgtccttgttctttgtcatcatgcggggagaatac
gatgcgttgcttccgtggcccttcaagcaaaaagtcacccttatgttgatggatcaagga
ccttccaggcgccatttaggggatgctttcaaaccagaccccaacagcagtagtttcaag
aagcccaccggagaaatgaatattgcttctggctgcccagtcttcgttgcacagactgtt
ctagaaaacggaacgtatattaaagatgatactatttttattaaagtcatagtggataca
tcggacctaccagacccctga
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