Petrimonas mucosa: ING2E5A_0649
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Entry
ING2E5A_0649 CDS
T04553
Symbol
ligA
Name
(GenBank) DNA ligase {ECO:0000255|HAMAP-Rule:MF_01588}
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
pmuc
Petrimonas mucosa
Pathway
pmuc03030
DNA replication
pmuc03410
Base excision repair
pmuc03420
Nucleotide excision repair
pmuc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ING2E5A_0649 (ligA)
03410 Base excision repair
ING2E5A_0649 (ligA)
03420 Nucleotide excision repair
ING2E5A_0649 (ligA)
03430 Mismatch repair
ING2E5A_0649 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmuc03032
]
ING2E5A_0649 (ligA)
03400 DNA repair and recombination proteins [BR:
pmuc03400
]
ING2E5A_0649 (ligA)
Enzymes [BR:
pmuc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ING2E5A_0649 (ligA)
DNA replication proteins [BR:
pmuc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ING2E5A_0649 (ligA)
DNA repair and recombination proteins [BR:
pmuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ING2E5A_0649 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ING2E5A_0649 (ligA)
MMR (mismatch excision repair)
DNA ligase
ING2E5A_0649 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ING2E5A_0649 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Auto_anti-p27
RNA_ligase
HHH
PTCB-BRCT
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
SCM55946
UniProt:
A0A1G4G4V4
LinkDB
All DBs
Position
I:796036..798072
Genome browser
AA seq
678 aa
AA seq
DB search
MEDLFSNDKMRSEVKARIETLRRQLHEHNYNYYVLSQPTISDFEFDALMRQLAELEKQYP
EFYDPNSPTMRVGSDINKNFVQVQHRYPMLSLQNTYTEGEISDFFNRVKRSLNEEFEIVC
ELKFDGTSISLIYENGRLLRAITRGDGKQGDDVTANVRTIRNIPLVLKGDKIPAYVEVRG
EILMPWSVFEELNREREAQEEPLFANPRNAASGTLKMQDPKAVASRRLESYIYYLMGEEL
PSGSHFENMEIARGWGLHVSPTMKKCRSLEEVLQFLSFWEVERKNLPVATDGVVLKVDSL
SQQRNLGSTSKFPRWAIAYKFNAEKALTRLESVTYQVGRTGAVTPVANLEPVLLSGTTVK
RASLYNEDAIRTLDLHIGDMVYVEKGGEIIPKITGVDKASRAPGGERVEFATNCPDCGTP
LLRNEDEAVHYCPNSENCPPQIKGRIEHFVTRKAMNITIGPETIGLLYDKGLIRDAADLY
ELRFEDLVRLDRWAETSARNLLASIEKSKKVPYERVLFALGIRFVGETVAQKLASAFHYI
DLLAAATVEQLTSVEEIGERIAQSVSDFFRNPRSVEFVERLKAHGLQFRLSEDALATRSD
RLAGLTVVISGTFELHSRDEYKAMILQHGGKNSGSVSKNTDFILAGENMGPAKLEKAEKL
GVKIIDEKTFLTMIGKES
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcttttttccaatgacaagatgcgttcggaggtcaaggccaggatagagact
ctccgaagacaactgcacgagcacaactacaattactacgtattgtctcaacccaccatt
tccgatttcgagtttgatgccctgatgcggcaacttgccgaactggagaagcagtacccg
gagttttacgatccaaattctcccacgatgcgcgtgggaagcgatatcaacaagaacttc
gtccaggtgcagcaccgttatccgatgttgtcgctgcagaacacctataccgaaggtgag
atttccgatttcttcaaccgggtgaaacgttcgttgaacgaggagtttgagattgtttgt
gaattgaagttcgatggtacatccatctcgctgatatatgagaatggccgactcttgcgg
gccattacccgtggtgacggcaaacagggcgacgatgtgacggccaatgtgcgtaccatc
cgcaacattccgttggtactgaagggtgacaagattccggcttacgttgaggtgagggga
gagatactgatgccctggagtgtattcgaggagttgaaccgggagcgtgaagcgcaggag
gagccgctctttgccaatccccgcaatgcagcgtcgggaacgttgaagatgcaggatccc
aaagcggttgcatcaaggaggctggagtcgtacatctattacctgatgggagaggagctt
ccgtcgggtagccatttcgaaaatatggagattgcccggggatggggactacatgtatcc
ccgacaatgaaaaagtgccgttcgctggaagaggtgctccagttcctgagcttttgggag
gtagagcgtaaaaacctgcctgtcgccaccgatggggtggtgctcaaggtcgactccctt
tcgcaacagcgcaacctcggttcaacctccaagttcccccggtgggccattgcctacaag
tttaatgccgagaaggccctcacgcgcctggagtcggttacctaccaggtgggacgcacc
ggagcagtcactcccgtggccaacctcgaaccggtcctgttgtcgggcacaaccgtaaag
cgggcctcgctttacaatgaagatgctatccgtacgctcgacctgcatatcggcgacatg
gtctatgtggagaagggaggggagatcatccctaaaattaccggagtggacaaggcctcc
cgggctcccggaggggagagggtagagtttgccaccaactgtcccgactgcggcacgccg
ctgttgcggaacgaggatgaggcagttcattactgtcccaacagcgaaaactgtccaccg
cagatcaagggtcgcatcgaacactttgtcacccggaaggcgatgaacatcactatcggc
ccggagaccatcgggttgctctatgacaaggggttgatacgggatgccgccgacctgtac
gagttgaggttcgaagatctcgtgagactcgaccgctgggcggaaaccagtgccaggaac
ctgctggcaagcatcgagaagtcgaagaaggttccctacgaaagggtgctgtttgctctt
ggcatacgttttgtgggagagacggtagcccagaagctggcgtcagcttttcactatatc
gacctgctagccgccgcaaccgtggaacagcttacttcggtggaggagatcggtgaacgg
atcgctcaaagtgtcagtgactttttccggaatccccggtcggtggagtttgttgagcgg
ctcaaggcacatggcctgcagttccggttgagcgaggatgcactggctacaagaagcgac
cggctggccgggctaaccgtggtgatcagcggaaccttcgagttgcattcacgcgacgag
tacaaagccatgatcctgcaacacggcgggaagaacagcggatcggtatcgaagaatacc
gacttcatccttgccggggagaatatggggccagccaaactggagaaggccgaaaagctg
ggggtgaagattatcgatgaaaaaacgtttttgacaatgataggaaaggagtcctga
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integrated database retrieval system
