Prunus mume (Japanese apricot): 103328948
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Entry
103328948 CDS
T03196
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor PIF4
KO
K16189
phytochrome-interacting factor
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103328948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmum03000
]
103328948
Transcription factors [BR:
pmum03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
103328948
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_NPAS4
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
103328948
NCBI-ProteinID:
XP_008229596
UniProt:
A0ABM0NTH9
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All DBs
Position
LG4:15407971..15412587
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AA seq
542 aa
AA seq
DB search
MNSCIPDWNFEADLPLTNQKKPMGPNHELVELLWRNGQVVLHSQTHRKPSPNPPNEARQV
QKQDQQTVRVGGLYGNSSNLTQDEDTGSLIHYPLEDSFDKEFCSHFFSELPSCDPIEIDK
PTKQFEEEKFAKFGASDTPHLVSAAPQPNVKSPAGMGYPANPMPPPRYQYNNSTEQNQNL
GGLGKVVNFSTFATPGKGDRGSSRXXXXXXXNLTQGEVKECSVMTVGSSYVGSNQVLNDL
DVSRASSNCDGTTGLSVGPFYDNVQKMMPQSETGKTDTLDPTPTSSSGGSGSSFGRGGKR
SNVVNSNKRKGRDAEDSECQSEAAGNKSAQRSGSSRRSRAAEVHNLSERRRRDRINEKMR
ALQELIPHSNKTDKASMLDEAIEYLKSLQMQLQVMWMGSGMAPMMFPGMQHYMPRMGMGM
GVGMGMGPPALPSMHNPMHLPRVPLVDQCMNVAPATNQAVMCQAPLLNPVDYHNQMQNPA
FQEQYARLMGFHHMQTMSQPMNMFRFGSQPMQQNQMTAPTGINSGHLGGGGTANDTLSGK
MC
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaattcttgcattcctgattggaactttgaggctgatctccctttgaccaaccaaaag
aaacccatggggccaaaccatgaactagtagagctcttgtggagaaatggacaggtagtt
ttgcacagccaaacgcatcgaaaaccgagtcctaatcctcctaatgaggccagacaagtt
caaaaacaagatcagcaaaccgtaagggttggtggattatatgggaactcaagtaatttg
actcaagatgaagacacaggttccttgatccactaccctcttgaagattcctttgacaaa
gagttctgttcccattttttttctgaattgccttcctgtgatccaattgagattgacaag
ccaaccaaacaatttgaagaagaaaagtttgctaagtttggtgcttctgataccccccat
cttgtttccgctgccccccaacctaatgttaagtcccctgctggtatgggatatcctgca
aacccaatgcctcctccaagatatcaatacaataactcaactgagcaaaaccaaaatcta
ggaggcttggggaaagtagttaatttttcaacatttgctaccccaggaaagggtgataga
ggatcttccagannnnnnnnnnnnnnnnnnnncaatttaactcagggggaggttaaagag
tgttcggtaatgactgttggttcgagttacgttggcagcaaccaagttctaaatgacctt
gatgtgagcagggcttcaagcaattgtgatgggacgactggtttatctgttggacccttc
tatgacaatgttcaaaagatgatgcctcagagtgagacagggaaaacagatacactagac
ccaactcctacttcgtcttctggtggttctggtagtagttttggcagaggaggaaagcgg
tctaatgttgtcaatagcaacaaaagaaagggtagagatgctgaggactcagagtgccaa
agtgaggctgcgggaaacaagtcagcacaacggtctggatcatccaggaggagccgtgct
gctgaagtccataatctctcagaaaggagacggagagatcggatcaatgagaaaatgaga
gcattgcaagagctcatacctcattctaacaagacagataaagcatcaatgttagatgag
gcaattgaatacttgaagtctcttcagatgcaacttcaggtaatgtggatgggaagcggg
atggcaccaatgatgtttccaggcatgcagcactatatgccccgaatgggaatgggaatg
ggagtgggaatgggaatgggaccaccagccttgccttcaatgcacaatccgatgcattta
cctagagtccctctagttgatcagtgcatgaatgtggctccagcaacaaaccaggctgta
atgtgccaagcaccgttgttgaatccagttgattatcataaccagatgcaaaatcccgcg
tttcaggagcagtatgcgcgtcttatgggcttccatcatatgcagactatgtctcagcct
atgaatatgttcagatttggctcccagcctatgcaacagaatcagatgacagcaccaact
ggcatcaacagtggacatttaggtggaggaggtacagctaatgatactttaagtggcaag
atgtgttaa
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