KEGG   Prunus mume (Japanese apricot): 103329295
Entry
103329295         CDS       T03196                                 
Name
(RefSeq) DNA repair protein RAD16
  KO
K15083  DNA repair protein RAD16
Organism
pmum  Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103329295
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NER4 complex
      103329295
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 DEAD zf-C3HC4_3 zf-RING_5 zf-C2HC_2 zf-RING_2
Other DBs
NCBI-GeneID: 103329295
NCBI-ProteinID: XP_008229965
LinkDB
Position
LG4:17468485..17474979
AA seq 877 aa
MELRSRKRVAGPSTDGNEKHQEEEDIIQGTESSDEDTYLPSASSASDSEEGEEHRYNVDL
NDKPSVITPIPKNGKVGRKKVRGEPIYEEKAHKLTQQPVEIDYFGLHKKKKKKSSKDREA
KQRLKWNIWEEEHDKWIDDNVTEDFDLENQNNVISEVSEAPSDLIMPLLRYQKEWLAWAL
KQEESETRGGILADEMGMGKTIQAIALVLARREINWTFNEPGSSTSFPGIKGTLVVCPVV
AVSQWVNEIERFTSKGSTKVLVYHGANREKSSKQFSEYDFVITTYSIVEADYRKNVMPPK
QKCPYCGKLFHEKRLSVHLKYFCGPHAFRTEKQSKQQRKKHLQSIPQKTFEPVKDKKHGG
SRKRSKLHKDDDMDSEDVGQGFSRAKSVLHAVKWNRIILDEAHYIKSRRCNTARAVLALE
SSYKWALSGTPLQNRVGELYSLVRFLQLVPYSYYLCKDCDCITLDHSSSTQCSNCPHNSV
RHFCWWNKYVATPIQLYGNQFRGKRAMLLLKQKILKNIVLRRTKRGRAADLALPPRIVSL
RRDTLDIKEQDYYESLYNDSQALFNTYVNDGTVMNNYAHIFDLLTRLRQSVDHPYLVVYS
ATAALRNEGRVNNDINEQVCGICHEPAEDAVVTACQHAFCKACLIDFSASLGQGSCPTCP
TCSKVLTVDLITNLGAANPTTKTTIKGFRSSSIMNRIQLDNFQTSTKIEALREEIRCMVE
KDGSAKGIVFSQFTAFLDLINYSLQKSGIKCVQLVGSMTMSARDNAIKTFTEDPDCRIFL
MSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFVIENTIEER
ILKLQEKKELVFEGTIGGSSDALGKLTEADLKFLFVT
NT seq 2634 nt   +upstreamnt  +downstreamnt
atggagcttcgttctcgcaagagagtcgccgggccttctaccgatggaaatgagaaacat
caggaagaggaagatataatccagggcaccgaaagctctgatgaagatacttatttaccg
tctgcgtcttctgcttctgatagcgaagaaggtgaagagcatcgatataatgttgactta
aatgataaaccaagtgttataacccctatacccaaaaatgggaaggtggggcgaaagaag
gtcagaggagaaccaatttacgaagagaaagcacacaaattgactcagcaaccagtcgaa
attgactattttgggttgcacaagaaaaaaaagaaaaagagttctaaagatagggaggca
aagcagcgcttgaagtggaatatctgggaagaggagcatgataaatggattgatgacaat
gtaactgaggattttgatctggaaaatcagaataatgtgataagtgaagtttctgaggca
ccatctgatctaattatgcctttactaaggtaccaaaaggaatggttggcctgggccctc
aaacaagaagagtctgaaaccagaggaggaatcctcgcagatgagatgggaatgggcaag
actatacaagcgattgctcttgtccttgctagacgtgaaattaattggacatttaatgaa
ccaggttcctccacaagctttcctggaatcaaaggcaccctcgtagtctgtcctgtggtt
gccgtgagccaatgggtaaatgagatagagaggtttacttcaaaaggaagcacaaaggtt
ctggtttatcatggggccaatagagagaagagttctaaacagttctcggaatatgatttt
gtcattactacatactccattgttgaggccgattacaggaagaacgtgatgcctcccaaa
cagaaatgcccttattgcggaaagttgtttcatgagaagagactgtccgttcacttgaaa
tatttttgtgggcctcatgcatttagaactgagaagcagtctaagcaacaaaggaaaaag
catctacaatcaataccacagaagacatttgagcctgttaaagacaagaagcatggaggt
tccaggaagagatcaaagctgcacaaggatgatgatatggattcagaagatgttggacaa
ggcttcagcagagcaaagtcggttttgcatgctgtgaagtggaaccgcattattttggat
gaggcgcattatataaaatctaggcgttgtaatactgcaagagctgttcttgccttagag
tcttcatacaaatgggctctaagtggcacaccccttcagaaccgtgttggagaactgtat
tctttggtgcggttcttgcaattagtcccctactcgtattacttgtgcaaagactgtgat
tgcataactcttgatcatagttcctcaacacaatgttcaaattgccctcataattcagtc
agacatttttgttggtggaataaatatgtggcgacgccaatacagttatatggaaatcaa
ttccgaggaaaaagggcgatgctattgctaaaacagaaaattttaaagaacatagtcctg
cgacgaactaaaaggggcagggctgctgatcttgctcttcctcctagaattgtttcattg
aggagggacaccttggatatcaaagaacaagattattacgagtcactatataatgatagt
caggcactatttaacacatatgtcaatgatggaactgtgatgaacaattatgctcacata
tttgatcttctcacacgcttgcggcagtctgttgatcatccttaccttgtggtgtattct
gcaactgctgcactgagaaacgaaggcagggttaataatgatatcaatgagcaagtatgt
ggcatttgtcatgaaccagcagaagatgcagtggttactgcttgtcaacatgccttttgc
aaggcttgcttgattgatttttctgcttctttgggacaaggctcatgccctacatgccct
acatgctcaaaagtacttactgttgatttaattacaaacctaggtgctgctaatccgact
actaaaactaccattaaggggtttagatcctcaagcattatgaacagaattcagcttgac
aactttcagactagtacaaaaattgaggctttgagggaagaaatcagatgcatggttgaa
aaggatggctctgcaaaaggtattgttttcagccagttcacggcattcttggatctcatt
aactactccttgcaaaagtctggtatcaagtgtgtccagttagttggaagcatgacaatg
tccgcaagggataatgctataaagacatttaccgaggatccagattgcaggattttctta
atgagcttgaaggccggaggtgttgctcttaatcttacagttgcatcacatgtatttttg
atggacccgtggtggaacccggctgttgagcagcaagcgcaagatagaatccaccgaata
ggccagtacaaacccatcagaattgtgagatttgtaatcgagaacacaattgaggagagg
attctaaagctacaggagaaaaaggaactagtgttcgagggtactatcggtggttcttca
gatgccctcggaaagctgacggaggctgacttgaaattcctctttgtcacttaa

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