Prunus mume (Japanese apricot): 103331948
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Entry
103331948 CDS
T03196
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03420
Nucleotide excision repair
pmum04120
Ubiquitin mediated proteolysis
pmum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103331948
04120 Ubiquitin mediated proteolysis
103331948
09124 Replication and repair
03420 Nucleotide excision repair
103331948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103331948
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103331948
Enzymes [BR:
pmum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
103331948
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
103331948
Multi subunit type E3
SCF complex
Ring finger protein
103331948
Cul2 complex
103331948
Cul3 complex
103331948
Cul4 complex
103331948
Cul7 complex
103331948
Cul8 complex
103331948
Cul9 complex
103331948
DNA repair and recombination proteins [BR:
pmum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
103331948
TCR (transcription coupled repair) factors
Cul4-CSA complex
103331948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
103331948
NCBI-ProteinID:
XP_008232845
UniProt:
A0ABM0P100
LinkDB
All DBs
Position
LG5:16168710..16171610
Genome browser
AA seq
116 aa
AA seq
DB search
MATLDSDVPMVPVGEASSSAGSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDL
CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atggcaacattggattcagacgtgcctatggttccggtaggtgaggcttcaagcagtgca
ggttcatcgaccaagaagcccaagcgatttgagatcaagaagtggaatgctgtagctctc
tgggcctgggatattgttgttgataactgtgccatttgcaggaaccatatcatggatctc
tgcattgagtgccaagcaaaccaggcaagcgccacaagcgaggagtgtacagttgcttgg
ggggtttgcaaccatgcattccacttccactgcataagccgatggctcaagacccgccaa
gtgtgtccattagataatagcgagtgggagtttcagaagtatggtcattag
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