KEGG   Prunus mume (Japanese apricot): 103331948
Entry
103331948         CDS       T03196                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03420  Nucleotide excision repair
pmum04120  Ubiquitin mediated proteolysis
pmum04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103331948
   04120 Ubiquitin mediated proteolysis
    103331948
  09124 Replication and repair
   03420 Nucleotide excision repair
    103331948
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmum04121]
    103331948
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103331948
Enzymes [BR:pmum01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     103331948
Ubiquitin system [BR:pmum04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   103331948
  Multi subunit type E3
   SCF complex
    Ring finger protein
     103331948
   Cul2 complex
     103331948
   Cul3 complex
     103331948
   Cul4 complex
     103331948
   Cul7 complex
     103331948
   Cul8 complex
     103331948
   Cul9 complex
     103331948
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      103331948
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      103331948
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 103331948
NCBI-ProteinID: XP_008232845
UniProt: A0ABM0P100
LinkDB
Position
LG5:16168710..16171610
AA seq 116 aa
MATLDSDVPMVPVGEASSSAGSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDL
CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 351 nt   +upstreamnt  +downstreamnt
atggcaacattggattcagacgtgcctatggttccggtaggtgaggcttcaagcagtgca
ggttcatcgaccaagaagcccaagcgatttgagatcaagaagtggaatgctgtagctctc
tgggcctgggatattgttgttgataactgtgccatttgcaggaaccatatcatggatctc
tgcattgagtgccaagcaaaccaggcaagcgccacaagcgaggagtgtacagttgcttgg
ggggtttgcaaccatgcattccacttccactgcataagccgatggctcaagacccgccaa
gtgtgtccattagataatagcgagtgggagtttcagaagtatggtcattag

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