Prunus mume (Japanese apricot): 103333496
Help
Entry
103333496 CDS
T03196
Name
(RefSeq) 4-coumarate--CoA ligase 2
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00130
Ubiquinone and other terpenoid-quinone biosynthesis
pmum00940
Phenylpropanoid biosynthesis
pmum01100
Metabolic pathways
pmum01110
Biosynthesis of secondary metabolites
Module
pmum_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
pmum_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
103333496
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
103333496
Enzymes [BR:
pmum01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
103333496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
103333496
NCBI-ProteinID:
XP_008234565
LinkDB
All DBs
Position
LG5:24788430..24792645
Genome browser
AA seq
606 aa
AA seq
DB search
MISIASNNSVETQKPAEISSPNLISDIHPTSSQQNQVPDNNIHSPTTAAAATTTTNTTNH
VFKSKLPDIPIPNHLPLHTYCFQKLSEFSDRPCLIVGSTGKSYSFSDTYLISQKTGAGLS
NLGIKKGDVIMILLQNCAEFVFAFMGASMIGAVTTTANPFYTAAEIFKQFKASNAKLIIT
HSQFVDKLREAPADGAAPDQNNYPKLGEHFKVVTVDDPPENCLHFSVISEANETELPEVV
IDPEDPVALPFSSGTTGLPKGVILTHKSLITSVAQQVDGENPNLYLKEDDVVLCVLPLFH
IYSLNSVMLCSLRAGAAVLVMHKFEIGTLLELIQRYRVSVAAVVPPLVIALAKNPMVAQF
DLSSIRVVLSGAAPLGKELEEALKGRVPRAVLGQGYGMTEAGPVLSMCLAFAKEPLPSKS
GSCGTVVRNAELKVIDAETGCSLGYNQPGEICIRGSQIMKGYLNDAEATATTVDKEGWLH
TGDVGYVDDDEEVFIVDRVKELIKFKGFQVPPAELESLLVSHPSIADAAVVPQKDEAAGE
VPVAFVVRSNGLQLTEEAVKEFIAKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLA
TPTPLA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgatatccattgcctctaataattccgtcgaaacccaaaagcctgctgaaatctcttcc
ccaaatctcatttctgatattcatcctacctcttcacaacaaaaccaagtccctgataat
aatattcattccccaacaaccgccgccgccgccactaccaccaccaacaccaccaaccat
gtcttcaagtccaaattaccggacatacccattcccaaccacctccctctccacacctac
tgctttcaaaaactctccgaattctccgacagaccctgcttgatcgtcggctccaccgga
aaatcctactctttctccgatacctacctcatttctcagaagaccggagccggcctctcc
aacctcggcatcaagaaaggcgatgtcatcatgatccttctccaaaactgcgccgagttc
gtcttcgccttcatgggcgcttccatgattggcgccgtcaccaccactgccaaccccttc
tacaccgccgccgagattttcaagcagttcaaggcttccaatgccaagctcatcatcact
cattcccagttcgtcgacaagcttcgagaagctcctgccgacggcgccgcccccgaccaa
aataactacccgaaacttggcgaacactttaaggttgtcacagtagacgatcctccagag
aattgcttgcatttctcggtgatctcggaggccaacgagacggagcttccggaggtggtg
atcgatccggaggacccagtagcgttaccattttcttcggggacgacggggctgcccaag
ggtgtgattctaacgcacaagagcttgatcaccagcgtggcccagcaggtggacggggag
aatccaaacctgtacttgaaggaagacgacgtggtactgtgcgtgctgccgctgtttcac
atatactcgctgaacagcgtgatgctgtgctcgctaagagcaggggcggcagtgctggtg
atgcacaagtttgagatcgggacactgctggagctgatacagcggtaccgggtgtcggtg
gcggcggtggtgccaccgctggtgatagcactggcgaagaatccaatggtggcgcagttc
gacctgagctcgattagagtggtgttgtcgggagcggcgccgctgggaaaggagttggag
gaggcgctcaagggccgagtccctcgggcagtcttgggtcagggatatgggatgactgaa
gcagggccggtgctatcgatgtgcttggcattcgcaaaggaaccgttgccaagcaagtca
gggtcatgcgggacggtggttagaaatgcagagctcaaggtcattgacgctgaaactggt
tgctcccttggctacaaccaacccggcgagatttgcatccgcggctctcaaatcatgaaa
gggtatttgaatgatgcggaggcaacggcaacgacggtagataaggaggggtggcttcac
actggtgacgtgggttacgtggatgatgatgaggaggtttttattgtggacagagtgaag
gagctcatcaaattcaaaggctttcaagtgccaccagctgagctggagtccctacttgtg
agccacccatccattgcagatgcagccgttgttccgcaaaaagatgaggctgctggtgaa
gttcctgttgcatttgtggttcgatcgaatggtcttcaacttactgaagaggctgtaaaa
gaatttatagcaaaacaggtggtgttttacaagagactgcacaaggtgtacttcgtccat
gccattccgaagtctccctctggaaagatattgagaaaagacctgagagccaagctagcc
acaccaaccccattggcctaa
DBGET
integrated database retrieval system