Prunus mume (Japanese apricot): 103340735
Help
Entry
103340735 CDS
T03196
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00906
Carotenoid biosynthesis
pmum01100
Metabolic pathways
pmum01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
103340735
Enzymes [BR:
pmum01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
103340735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
GIDA
FAD_binding_2
FAD_oxidored
Thi4
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
103340735
NCBI-ProteinID:
XP_008242382
LinkDB
All DBs
Position
LG8:14071309..14075553
Genome browser
AA seq
528 aa
AA seq
DB search
MDCVAAMTVSFFPTWRSKRRGLPSKKDAPFFGYGLYKKHSLQVKASAGSGGGVGVAVKQG
FADEEDYIKAGGSELLFVQMQQNKAMEEQSKLSDKLPPISVGDNILDLVVIGCGPAGLAL
AAESAKLGLKVGLIGPDLPFTNNYGVWEDEFKDLGFEGCIEHVWQDTIVYLDDDSDPILI
GRAYGRVCRTKLHEELLRMCVESGVSYLNSRVKSIVEASNGHSLVACDRDTIVPCRLATV
ASGAASGKLLQYEVGGPKVSVQTAYGVEVEVENNPYDPNLMVFMDYRDYTKQKVSSLEAE
YPTFLYAMPMSPTRFFFEETCLASKEAMPFDLLKKKLLSRLKTMGIRIIKTYEEEWSWIP
VGGSLPNTEQKNLAFGAAACMVHPATGYSVVRSLSEAPKYASVIATILKPGHYKAIPGRQ
ISNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEDIRTFFHTFFHLPTWMWQGFL
GSTLSSADLMLFAVYMFVIAPNNLRKGLIRHLLSDPTGATMIRTYLTL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggactgcgttgcggcaatgacggtgtcgtttttcccgacttggaggtcgaaaagaaga
gggctgccaagtaaaaaggacgctcctttctttggctacggcttgtacaagaagcattct
ctgcaagtgaaagcaagtgccggaagtggagggggtgtgggtgtggctgtcaaacaaggc
tttgcggatgaagaagattatataaaggctggcgggtctgagttacttttcgttcaaatg
cagcagaacaaggccatggaagagcagtccaagctctctgacaagctaccgccaatatct
gtaggagataatatactggatttggtggtgattggttgtggtccagcaggtcttgctctg
gctgcagagtcagccaagttaggattgaaagttgggcttattggccctgacctccctttt
acaaataactatggtgtttgggaggatgaattcaaagatcttggatttgaagggtgtatt
gagcatgtttggcaggacaccattgtatatcttgatgatgattctgaccccattctgatt
ggtcgtgcttatggacgcgtttgtcgaaccaaactacatgaggagcttttaagaatgtgt
gtggagtcaggtgtttcatacctcaattcaagggtgaaaagtattgttgaagctagcaat
ggccatagtcttgtagcctgtgaccgcgataccatagttccctgcaggcttgctactgtt
gcatcaggagctgcctcagggaagcttttgcaatatgaggtcggtgggccaaaggtgtct
gttcaaacagcttatggtgtggaggttgaggtggaaaacaatccatacgatcccaaccta
atggttttcatggactacagagactacacaaagcaaaaagtttcatctttagaagcagaa
tatccaacatttctttatgccatgccaatgtccccaacaagatttttctttgaggaaact
tgcttggcttctaaagaggccatgccttttgatttactgaagaaaaagctcttgtcaagg
ttaaagacaatgggaatccgtattataaaaacttacgaagaggaatggtcttggattcca
gttggtgggtccttaccaaatactgagcaaaagaacctagcatttggtgctgccgcttgt
atggtacatccagccacagggtattcagttgtgaggtctttgtcagaggctccaaaatat
gcttccgtgattgcaactattttgaagccgggtcattataaggccattcccggccgtcaa
ataagtaatgagaacatctcgatgcaagcatggaacaccctctggccgcaagaaaggaag
cgccaaagagcattctttctttttgggctagcacttattctgcaactggacattgaggac
atcaggacattctttcatactttcttccacttgcccacctggatgtggcagggtttcctt
ggctccactttgtcctcagctgatctaatgctttttgccgtgtacatgtttgttatagca
ccaaataatttgagaaagggcctcatcagacatctactttctgatcctactggagccact
atgataagaacctatctcaccctatag
DBGET
integrated database retrieval system
