Prunus mume (Japanese apricot): 103342935
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Entry
103342935 CDS
T03196
Name
(RefSeq) protein SIEL
KO
K13141
integrator complex subunit 4
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103342935
Spliceosome [BR:
pmum03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
103342935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Cnd1
PDS5
MGC-24
Motif
Other DBs
NCBI-GeneID:
103342935
NCBI-ProteinID:
XP_008244824
LinkDB
All DBs
Position
Unknown
AA seq
958 aa
AA seq
DB search
MEDHVFLTCDHPLNLPTISTNEPLSLEALASLRSLIINPSTTAPTVSSVIETLTRSLQLS
RDPLAIHHTLKLLTDMALRRPHLSGVVFDSVYSHSLLSTHSTRVAAESLDALASIAEGNR
VLAPGIEELDDRLFASLCFSPSRSVRPWLLRNADRFGVQPHLLFTLFLGFTKDPYPYVRK
VALDGLVGLRKNGVIEDPDMIEGCYFRAVELLNDMEDCVRSAAVRTVCAWGLMLVACKSE
TKAYWSDEVFVKLCSMVRDMSMEVRVEAFCALGKIEMVSEEILLQTLSKKVLVTMKGKKS
LAQCSDEQLETSGSSVAGAFMHGLEDEFHEVRKAACHSLRTLTILSAKFAGEALNLLMDV
LNDDSILVRLQAFETMHRMATFDCLTVQETHMHMFLGTLVDNDALIRSSARKILKLAKLQ
KLKLFRLTIDALLENLERHPQDEADVLSVLFHIGRNHGKFVVRIIEEVFPQMEPMSNGKL
GFDSVRVAALLVLAISAPLSRECDCNIPPTIFSYAVTYLGRISQALSDLMNQNSLLDYLS
QCSRSSGPYAIEFNFKEGEPCLPNANVPTFTSNEIIGSIAMPLPQKTGGTSEILSPTIKK
PREAGTSLVEYQLDVHDEVTKSMNVILAKVKDIWPLVLSGFMNEVLRTLRSCREELATFT
SDSHASAGVFSFTKQYIQIVKLLTKAWVNFLSSTHFPCGMGELDLVLGKLDRRLRDLKSA
FIRLSEEEELHILELILVTCMLRLSKVEICCNLGTLRKLSSMMSRVECLLRDGSVEPSRF
IIEVGKLSSEFGSFSLNEASFNPLLIRRVLESFSLKQLVLCGRLKHMKAELDITDNEYEN
PLRFVAGLPVGIPCYITLHNISAESRLWLKMTVNEDNESTQFVFLDLNHFGGCDDVRIFM
FTAPFYKTPKAFSFTIRVCICMECLSEVEDVSSVKRWGPRHELTYLCREKDVYLSMVK
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccacgtgttcctcacgtgcgaccaccctctcaaccttccaacaatttcaacc
aacgaacctctctctctcgaagccctagcttccctgaggtctctgatcatcaacccctca
actaccgcgccgacagtctcttccgtcatcgaaaccctaactcgctcgctccaactcagt
cgcgacccgctcgccattcaccacactctcaagctcctcactgacatggccttgcgacgc
ccccacctctcaggcgtcgtcttcgactcggtctattcccactcgctcctttccacccat
tcgacccgcgtcgccgccgaatctctcgacgcactcgcttctattgcggagggcaaccga
gtcctagctcccggcattgaagaattggatgaccgtttattcgcctcgctctgtttcagt
ccatctcgttccgtacggccatggcttctcagaaacgccgacaggttcggtgtacagcct
catttgttattcactctgtttctagggtttacgaaagatccatatccgtacgtgaggaaa
gttgctttggacggacttgttggcttgcgcaagaacggtgttattgaggaccctgacatg
atcgaagggtgctacttccgtgcagttgagcttctaaacgacatggaagattgcgttaga
tcggctgcagttcgcacggtgtgtgcttggggtctaatgctggtggcgtgcaagtcggag
acgaaggcatattggtctgatgaagtatttgtcaaactttgttcaatggtgagagacatg
agcatggaggttagagttgaagctttttgtgcccttgggaagatagaaatggtatctgag
gaaattcttttgcaaaccctgtcaaagaaagttctagtgaccatgaagggaaagaaatct
cttgctcagtgctctgatgaacaactagaaacatcagggtcaagtgttgctggagctttc
atgcatgggcttgaggatgaattccatgaggtgcgaaaagctgcatgtcattctctgcgt
acactgaccatactctctgccaagtttgctggagaagccttaaacttactgatggatgta
ctgaatgatgactcaattcttgtccggctacaagcttttgaaactatgcatcgaatggca
acctttgactgtctgacagtgcaagaaacacacatgcatatgtttcttggcactctggtt
gacaatgatgccctcataagatcttcagcaaggaaaatacttaaattggcaaagctgcaa
aagttgaagttgtttagattaactattgatgcccttctagaaaatttggaaagacatcca
caggatgaagcagatgtattatctgttttgtttcatattggacgaaatcatggaaagttt
gtggtccgcataattgaggaggtttttccgcagatggagccaatgtctaatggcaagttg
ggctttgatagtgtgagagtggccgccttactagttctggccatatcagctccactttca
cgtgaatgtgattgcaatattccacctacaatattttcttatgcagttacatacctggga
aggatttctcaggctttgagtgaccttatgaatcaaaatagccttttggattacttgtct
cagtgcagtagatcctcaggaccgtatgccatagagttcaacttcaaagagggggagcca
tgcttgcctaatgctaatgttccaacctttacaagtaatgagataattggttccattgca
atgccattgccccaaaagacaggtggaacctctgaaattttgtctccaacaataaagaag
ccaagggaagcaggaacttcacttgtagaataccagctagacgtgcatgatgaagttacc
aagtcaatgaatgttattcttgcaaaggtgaaggatatctggccacttgtactgtcagga
tttatgaatgaagtactgaggactttgagaagttgcagggaggagttggcaacatttact
tctgactcgcatgcatctgctggtgtattttcctttacgaagcaatatatccagatagtg
aaactgcttacaaaggcgtgggtgaacttcctgtcttcaacacattttccttgtggaatg
ggagaattggacttagtattgggaaagctggacaggaggcttagagatctgaagagtgcg
tttataagattgtctgaagaggaggagttacatatcttggagctgatacttgtgacttgt
atgctcagattgtccaaagtggaaatttgctgtaatcttggaaccttgagaaagctctct
agtatgatgtcacgggtggaatgtctccttagagatggatctgttgaaccatccaggttt
ataattgaagtcggaaaattatcatccgaatttggttctttttctctcaatgaagcttcc
tttaacccccttctcattagaagggtacttgaaagcttctccctcaagcaacttgtgttg
tgtggtagactcaagcacatgaaggcagagctggatataactgacaatgagtatgaaaat
cctcttcggtttgttgcgggactgccggttggtataccatgctatatcactcttcataac
atttcagctgaaagtaggttgtggctgaaaatgactgtaaatgaagacaacgaatcaact
cagtttgtcttcttggatttaaaccattttggaggctgtgatgacgtcagaatatttatg
tttaccgcacccttttacaaaaccccaaaagcattttcttttacgattagggtctgtatt
tgtatggaatgtttgtctgaggttgaggatgtttcttctgtcaaacgttggggtccaaga
catgagcttacatatctttgccgagaaaaggatgtttatctttcgatggttaagtaa
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