Pedobacter mucosus: LOK61_00740
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Entry
LOK61_00740 CDS
T08291
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pmuo
Pedobacter mucosus
Pathway
pmuo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LOK61_00740 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmuo03400
]
LOK61_00740 (nth)
Enzymes [BR:
pmuo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LOK61_00740 (nth)
DNA repair and recombination proteins [BR:
pmuo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LOK61_00740 (nth)
Prokaryotic type
LOK61_00740 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
DUF763
DUF2400
Motif
Other DBs
NCBI-ProteinID:
UKT64315
LinkDB
All DBs
Position
complement(195956..196639)
Genome browser
AA seq
227 aa
AA seq
DB search
MLKKERYKLFVEHFSAKQPDAETELHYNNPYQLLVAVILSAQCTDKRINMVTPALFQRFP
NAKMLAEVTPDIVYDYIKSVSYPNNKAKHLVGMANILLNEFDNVVPSDIDQLQKMPGVGR
KTANVIASVIYNAPAMAVDTHVFRVANRLGLTNGKTPLAVEKDLVKGLPQQDIHIAHHWL
ILHGRYVCVARSPKCEVCEITYLCRYFERLTAQNEKNSLNKGLKVTS
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaaaaagaacgctataaactttttgtagaacacttttcggctaagcaacctgat
gccgaaaccgaattgcattataataatccatatcagcttttagttgctgtaattctatcg
gctcaatgcaccgataaaagaataaatatggttacgccggccttatttcaaagatttcct
aacgcaaaaatgttagcggaagttacaccagatattgtatatgactatattaaaagtgta
agttatccgaataataaagctaaacacttagttggaatggctaatattttattaaacgaa
tttgataatgttgtaccttcagatattgatcaacttcaaaaaatgccaggtgttggtcgg
aaaactgctaacgtaatcgcttcagtaatctacaatgcaccagccatggctgtagatacc
catgtatttcgggtggctaaccgtttaggtttaaccaatggtaaaactccgttagcagta
gaaaaagatttagttaaaggcttaccacagcaagatattcacattgcgcaccattggcta
attttacatggcagatatgtttgtgtagctcgaagtccgaagtgcgaggtttgtgaaatt
acttatctatgccgctattttgaaaggttgacagctcaaaatgaaaaaaattcgttgaac
aaagggttaaaagttactagttaa
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