Protobothrops mucrosquamatus (Taiwan habu): 107293338
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Entry
107293338 CDS
T05763
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04010
MAPK signaling pathway
pmur04120
Ubiquitin mediated proteolysis
pmur04140
Autophagy - animal
pmur04144
Endocytosis
pmur04620
Toll-like receptor signaling pathway
pmur04621
NOD-like receptor signaling pathway
pmur04622
RIG-I-like receptor signaling pathway
pmur05132
Salmonella infection
pmur05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107293338 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107293338 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107293338 (TRAF6)
04140 Autophagy - animal
107293338 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107293338 (TRAF6)
04621 NOD-like receptor signaling pathway
107293338 (TRAF6)
04622 RIG-I-like receptor signaling pathway
107293338 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107293338 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
107293338 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmur04131
]
107293338 (TRAF6)
04121 Ubiquitin system [BR:
pmur04121
]
107293338 (TRAF6)
Enzymes [BR:
pmur01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107293338 (TRAF6)
Membrane trafficking [BR:
pmur04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
107293338 (TRAF6)
Ubiquitin system [BR:
pmur04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
107293338 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
Med21
TRAF6_Z2
SlyX
TRAF3_RING
RING_XB3-XBAT31
DUF4455
DUF16
zf-RING_11
Cast
PUMA_CC
U-box
ATG16
CENP-F_leu_zip
ADIP
DUF948
PspA_IM30
DUF7310
UPF0242
Motif
Other DBs
NCBI-GeneID:
107293338
NCBI-ProteinID:
XP_015677973
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MSLLHSNTSFEINDQETDCCAAMASACSAGTKEESFTAPISNGTGGTLSNSFMEEAQGYD
VEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAGHKCPIDNEILLENQL
FPDNFAKREILSLTVKCPNKGCSQKMELRHLEDHQIHCGFASEKCSLCQGIFQKNQLQEH
IRLECLRRQIACPNCAMCMPYEEKKVHDEICLLANVFCEYCNTMLIREQLPNHYDNDCPT
APVPCTYSAFGCLEKMQRNALACHMQEFTQVHMRMMAHTLRSVSVTTPTSMNFSGTLPFD
PSLFSQGMPPSCECSPEVQNFKETIQQLEGRLVRQDHQIRELIAKMETQQNQMGDLKRTI
RTLEEKIADTEAQQCNGIFLWKIENFSAYLKAQEEERPVVIHSPGFYTGKPGYKLCLRLH
IQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQSEGSPRHNHEEVMDTKP
ELLAFQRPMAHRNPKGFGYVTFMQLQALKQRTYIKDDILLVRCEVLTRLDLTSLRREGFQ
PRSTDGT
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgagtctactacatagtaacacaagttttgaaatcaatgatcaagagactgactgctgt
gcagccatggccagtgcttgcagtgctgggaccaaggaggaaagcttcactgcccctatc
agcaatggtactggtgggacactttcaaactctttcatggaggaagcccaaggctatgat
gtggagtttgacccaccactggaaagtaaatatgagtgccctatctgtttaatggctcta
cgggaagcagtacagacgccgtgtggacatcgtttttgcaaagcttgcattgtcaaatcc
ataagagatgcaggtcataaatgtccaatagacaatgaaatcttactagaaaatcaactc
ttccctgataattttgcaaaacgtgaaatcctctcactgacagtgaaatgtcccaacaaa
ggctgcagtcaaaagatggagctaaggcacttagaggaccatcagatacactgtggattt
gcatcagaaaaatgttctctgtgtcaagggattttccagaagaaccagttgcaagaacat
attaggctagaatgtctacgacggcaaattgcctgtccaaattgtgccatgtgtatgcct
tacgaagaaaaaaaggttcatgacgaaatatgccttttggcaaatgtcttctgcgaatat
tgtaatacaatgctaatcagagaacagctgcctaaccattatgataatgactgccctact
gctccagtaccatgtacctatagtgcatttggatgtctagaaaagatgcagagaaatgct
ttggcatgccacatgcaggaatttactcaggttcatatgagaatgatggctcacactctt
cggagtgtcagcgttactactccaacttccatgaatttttctggaactttaccctttgac
ccatcactcttctctcaaggcatgccaccctcatgtgagtgtagcccagaggtccagaac
ttcaaggagactattcagcaactggaaggtcgcttggtaagacaagatcaccaaattaga
gaactcattgcaaaaatggagacacaacagaaccagatgggagatctcaaacgcaccatc
cgaacgctagaggaaaaaattgctgacactgaagcccaacaatgtaatggtattttcctg
tggaaaattgaaaatttcagtgcgtacctgaaagctcaggaggaagaaagacctgttgtg
atccatagtccaggtttctacactgggaaaccaggatataaactttgcttgcgtctgcat
atccagttaccaagcgctcagcgttgtgctaactacatttctctttttgttcacaccatg
caaggcgactatgacagtcatctcccttggcctttccaaggcaccatacgtctatcaatt
ttggatcagtctgaaggatctccaaggcataaccatgaagaagtaatggataccaagcct
gagttgctagccttccaacgtcctatggcccatcgtaatccaaagggctttggatatgtg
acttttatgcagttgcaagccctaaaacaaagaacatacataaaagatgatattctcttg
gtacgctgtgaagttttaacacgtctggacttaaccagtctccgaagagagggttttcag
cctcgtagtacagatggaacataa
DBGET
integrated database retrieval system
