Protobothrops mucrosquamatus (Taiwan habu): 107296464
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Entry
107296464 CDS
T05763
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04115
p53 signaling pathway
pmur04145
Phagosome
pmur04148
Efferocytosis
pmur04350
TGF-beta signaling pathway
pmur04510
Focal adhesion
pmur04512
ECM-receptor interaction
pmur04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
107296464 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107296464 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107296464 (THBS1)
04148 Efferocytosis
107296464 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
107296464 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
107296464 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107296464 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmur04131
]
107296464 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pmur00536
]
107296464 (THBS1)
Membrane trafficking [BR:
pmur04131
]
Endocytosis
Phagocytosis
Opsonins
107296464 (THBS1)
Glycosaminoglycan binding proteins [BR:
pmur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107296464 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
TSP1_ADAMTS
EGF
TSP1_CCN
cEGF
Motif
Other DBs
NCBI-GeneID:
107296464
NCBI-ProteinID:
XP_015681307
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MELSGGLFLLLMLGVCTTNRIPETSDDNSVFDLFELIGLGRKGAHKGLGVHPVKGLELSS
PAYRIDDATRIPAVSDHKFQDILYSIQAEKGFILLANLRPIKKDAGTILAVERKDNSGYV
FKLVLNGKAKTLDLSVFPEEGNQSLVSVEEVKLPIARWSSIILFVQEDQAQLYVGCDKMT
NVELEIPIQDIFTRDLSNSARLRIAKGGVNDNFQGMLQNVRFVFGTTLETILRNKGCQSS
TGTLIKLDNPMNGSRPAIRTNYIGQKTKDICGFSCDDLTKMFIELQSLRALVTKVEKSVN
HMELIAPHNIKKGICLHNNVVYENAAEWTTDTCTTCTCQNSAVMCHKVSCPLMPCSNATV
PDGECCPRCWPSDSADDAWSPWSEWTTCSTTCGNGIQQRGRSCDRINHLCEGSSVQTRIC
NMQECDKRFRQNGAWSHWSPWSSCSVTCGTGLITRIRLCNSPLPQMGGKTCEGEARENMP
CQKSPCPINGNWGPWSPWDACPITCGGGIQKRSRLCNNPEPKFEGKDCIGDATATQMCNK
QDCPIDGCLSNPCFAGTKCTSFPDGSWKCGPCPVGYQGNGIRCKDIDECQEVPDACFVLG
GVHRCENTVPGYHCLPCPSRFTGPQPFGRGVEDAMAKKQVCKPRNPCADGTHTCNKYAKC
IYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLHCVANATYHCTKDNCPNLPN
SGQEDYDDDGIGDACDDDDDNDKIPDDRDNCPFNYNPQQYDYDRDDVGDRCDNCPYNHNP
LQIDTDQNGEGDACAVDIDGDGILNERDNCQYVYNVDQTDLDLDGVGDQCDNCPLAHNPD
QMDSDSDRIGDKCDDNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDNDGV
PDDRDNCRLVPNPDQVDSDGDGRGDACKDDFDNDNVNDIDDVCPENVHISETDFRRFQMI
PLDPKGTSQIDPNWIVRHKGKELVQTVNCDPGLAIGFDEFNAVDFSGTFFINTERDDDYA
GFVFGYQSSSRFYVVMWKQVTQTYWESQPTKAQGYSGLSIKVVNSTTGPGMHLRNALWHT
GNTPEQVKTLWHDPRQIGWKDFTAYRWRLTHRPKTGFIRVVMYEGKKIMADSGPLYDKTY
AGGRLGLFVFSQEMTFFSDLKYECKD
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggagctctccggtggtctctttctccttctgatgcttggagtctgcacaacaaaccgg
attccagagactagtgatgacaacagtgtttttgatctctttgagttaattggcttgggc
cgcaagggagcccacaaaggattgggggtgcatccggtaaaaggactagagctttccagc
cctgcctaccgcatagatgacgccacccgtatccctgctgtttctgatcacaaattccaa
gacattctttattccatccaagctgagaagggcttcatcttgttagctaatcttcgtccg
ataaagaaggatgctggcaccatattggccgtggagcgcaaggacaactctggctacgtt
tttaagttggtgctcaatggcaaggcgaaaacattggacttgagtgtctttcctgaggaa
ggcaatcaaagtttggtgtcagtggaggaggtgaagttgcccattgcacgatggagtagc
atcatcctctttgtgcaagaggatcaggctcaactctatgtgggctgtgataaaatgaca
aatgttgagctggaaattcctattcaagacatcttcactcgggatctgtccaacagcgcc
agactccgcattgctaaaggaggagttaatgacaacttccagggaatgctgcagaatgtg
cggtttgtgtttggaactacactggaaaccatcctgaggaataaaggctgccagagctct
actggaacacttattaaattagacaatcccatgaatggctcccgcccagccattcgcacc
aactacattggccagaaaaccaaggacatctgtggcttttcttgtgacgacctaaccaaa
atgtttatagaactgcaaagcctgcgtgccctggttacaaaagttgaaaaatctgtcaac
catatggaacttatcgccccacataatataaagaaaggaatatgcctccacaataatgtt
gtgtatgaaaatgcagctgagtggaccactgacacctgtaccacatgtacctgccagaat
tctgctgtaatgtgccataaagtatcttgtcctctcatgccttgttccaatgccacagtt
cctgatggtgaatgctgcccaaggtgttggccaagcgattctgccgatgatgcttggtct
ccctggtctgaatggaccacttgctctacaacctgtggcaatgggattcagcagagaggc
cgctcttgtgacagaatcaaccatctttgtgaaggctcctcagtgcaaacacggatatgt
aatatgcaagaatgtgataagagattcagacagaacggtgcttggagccattggtcccct
tggtcttcctgctctgttacttgtggaactgggttaatcactcgaatccgtctgtgcaat
tctccacttcctcagatgggaggcaaaacgtgtgaaggagaggcacgagaaaacatgcct
tgccagaaaagcccctgcccaattaatgggaactgggggccatggtcaccttgggatgcc
tgtccaattacgtgtggcggaggcattcagaaacgcagccgtctctgcaacaatccagag
cccaaatttgaagggaaggattgcattggtgatgcaacagccactcagatgtgcaacaag
caggattgcccaatcgatggatgcctgtctaatccttgttttgcgggaactaaatgcact
agtttccctgatggttcctggaaatgtggtccgtgccctgttggctatcaaggaaatgga
attagatgcaaagatattgatgaatgccaagaggttccagatgcttgctttgtacttggt
ggagtgcacagatgtgagaatactgtacctggttatcactgcctgccttgtccctcccgc
tttacaggaccacagccttttggtcggggtgtggaagatgcaatggcaaagaaacaggtg
tgcaagccacgtaacccatgtgctgatggaactcacacctgcaacaaatatgccaagtgc
atctaccttggacacttcagtgacccgatgtatcgctgtgaatgtaaaccagggtatgcc
ggtaatgggattatctgtggagaagacactgacttagatggatggccaaatgagaacctt
cactgtgttgccaatgctacttatcactgcactaaagataattgccccaatcttcccaat
tctggacaggaagactatgatgatgatggaattggtgatgcctgtgatgatgatgatgac
aatgacaagattccagatgatagggataactgtccattcaattacaatccacaacagtat
gactacgatagggatgatgttggtgatcgctgtgataattgcccatacaatcacaatcct
cttcagatagacacagaccaaaacggagaaggcgatgcttgtgctgtggatatcgatgga
gatggcattcttaatgaaagagacaactgccaatatgtgtacaatgtggatcagacggat
ttagacttggatggtgttggagatcagtgtgacaactgtccattggcacataatccagat
cagatggattccgattccgatcgcataggggataagtgtgatgacaatcaggatattgat
gaagatggccaccagaataatcttgataactgtccttacgtgcccaatgctaaccaagct
gaccatgacaaggatgggaagggggatgcctgtgaccacgatgatgacaatgatggtgtt
cctgatgacagagataattgcagattggttcccaacccagaccaagttgattcggatggt
gatggacgtggagatgcatgcaaagatgactttgacaatgataacgttaatgacattgat
gacgtctgccctgagaatgttcacataagtgagacagatttccgtcgattccagatgatt
cccttggatccgaagggaacatctcaaattgatcccaactggattgttcgtcacaaaggc
aaagaactggttcagactgtcaactgtgatcctggacttgctattggttttgatgaattt
aatgctgttgacttcagtggcactttcttcattaacacggaaagagatgatgactatgct
ggctttgtatttgggtatcaatccagcagccgtttttatgtggtcatgtggaagcaagtt
acccaaacgtattgggaatcacagccaaccaaagctcagggatattcaggtctttctatc
aaagtagtgaactccaccacgggccctggaatgcaccttcgtaatgccttgtggcatact
ggaaatactcctgaacaggtaaagaccttgtggcatgaccctcgtcagataggttggaaa
gatttcactgcttacagatggcgtctcactcacaggccaaaaactggcttcattagagtg
gtgatgtatgaaggaaagaagatcatggctgactctggccccctctatgacaaaacctat
gctggtggtcgcttagggttgtttgtcttctctcaagaaatgacattcttctctgatcta
aaatatgagtgtaaagattaa
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