Persephonella marina: PERMA_1882
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Entry
PERMA_1882 CDS
T00870
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase)(Meso-diaminopimelate-adding enzyme) (Meso-A2pm-adding enzyme) (UDP-N-acetylmuramyl-tripeptide synthetase) (UDP-MurNAc-tripeptidesynt
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pmx
Persephonella marina
Pathway
pmx00300
Lysine biosynthesis
pmx00550
Peptidoglycan biosynthesis
pmx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PERMA_1882
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PERMA_1882
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmx01011
]
PERMA_1882
Enzymes [BR:
pmx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PERMA_1882
Peptidoglycan biosynthesis and degradation proteins [BR:
pmx01011
]
Precursor biosynthesis
Amino acid ligase
PERMA_1882
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ACO02989
UniProt:
C0QSJ7
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All DBs
Position
1793948..1795423
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AA seq
491 aa
AA seq
DB search
MKRIDDLFEDIFHRGSSEKVSHLTNNSKKVKKGSVFFAIKGTKIDGHQFIEDAIRNGASA
VVLSDRKKAEYYSKKYPDVTFVISDNIRKTQAEVSNRFYDHPSEKLKVIGVTGTNGKTTV
TNLLLQYLELAGKNTGIIGTIHYKYREKIFASGRTTPDSIEWFYLLSEMRDRGADYVVAE
VSSHAVDQYRVYGTVFHGGIFTNLTQDHLDYHRDMENYFQTKKSFFDYIKMTNPEGVIST
NIDDHYGRRIYQDFKSCMNTISYGRDKNAQFRVSDFVVDMKGVSFCYEYNGIKRRVKSDL
KGEFNIYNIAAAFSYLLRSGFDIDFLHHATEKLKPIRGRFETVEKDFLVVNDYAHTPDAI
EKILMSLNQIKKNRIIIVFGAGGDRDRGKRPLMGKIAEELADIIILTSDNPRSEDPSRII
EDIKSGMKMEKEIYEIIDREEAIKKAIEIARKDDIVLIAGKGHETYQIIGDKTYYFDDLD
VAKKYLGFRDG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggatagatgatctttttgaagatatctttcatagaggaagttctgagaaagtt
tcccatctgacaaacaactcaaaaaaggttaaaaaagggtctgttttctttgctataaag
ggaacaaagatagatggacatcagtttattgaggatgccataagaaatggagcctctgct
gttgtcttatctgacaggaaaaaggcagagtactacagtaagaagtatcctgatgtcaca
tttgttatatcggataatataaggaaaactcaggcagaggtatcaaacaggttttatgat
catccatcagaaaagctgaaggttattggtgttacaggaacgaatggtaagacaacagta
acaaacctgcttctacagtaccttgagcttgcaggtaaaaatacaggaattataggaact
atacattacaagtacagggaaaagatatttgcatcagggaggacaacacctgactctatt
gagtggttttaccttttgagtgagatgagagacaggggagcagattatgttgttgctgaa
gtttcctcacacgctgtagatcagtacagggtttacggaactgtatttcacggcggtata
tttacaaatcttacacaggatcatcttgactaccacagagatatggaaaattacttccag
acaaagaagagtttttttgattatattaaaatgacaaaccctgaaggggttatatcaaca
aatattgatgatcattacggaaggaggatctatcaggatttcaaaagctgtatgaacact
ataagctatggaagggataagaatgcccagttcagagtttcagattttgttgttgatatg
aaaggtgtctcattctgctatgagtataacggaataaaaagaagggtaaaatcagatcta
aaaggggagttcaatatatacaatatagcggcggcgttctcctaccttctcagatcggga
tttgatattgattttttacatcacgccactgagaagctgaagcctataaggggcagattt
gagactgtagagaaagattttctcgttgttaatgattatgcacacacacctgacgctata
gaaaagatacttatgagcctaaaccagataaaaaagaacaggataatcatagtttttgga
gcaggtggagacagggatagaggtaaaagacctttgatgggtaagatagctgaggagctt
gcagatataataatccttacatctgacaacccaagatctgaagatccttcaaggataata
gaggatataaaatcaggtatgaagatggaaaaggagatttacgagataatagacagggaa
gaggctataaaaaaggctattgagatagcaaggaaggatgatatagttcttatagcagga
aaaggacatgagacataccagataataggggataaaacctattactttgatgatcttgat
gttgccaagaaatatcttggattcagagatggttaa
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