Ectopseudomonas mendocina ymp: Pmen_0453 Help Entry Pmen_0453         CDS       T00510                                  Name (GenBank) DNA ligase (NAD(+))   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pmy  Ectopseudomonas mendocina ymp Pathway pmy03030   DNA replication pmy03410   Base excision repair pmy03420   Nucleotide excision repair pmy03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pmy00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Pmen_0453    03410 Base excision repair     Pmen_0453    03420 Nucleotide excision repair     Pmen_0453    03430 Mismatch repair     Pmen_0453  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pmy03032]     Pmen_0453    03400 DNA repair and recombination proteins [BR:pmy03400]     Pmen_0453 Enzymes [BR:pmy01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      Pmen_0453 DNA replication proteins [BR:pmy03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      Pmen_0453 DNA repair and recombination proteins [BR:pmy03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      Pmen_0453    NER (nucleotide excision repair)     GGR (global genome repair) factors      Pmen_0453    MMR (mismatch excision repair)     DNA ligase      Pmen_0453   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       Pmen_0453 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH HHH_5 RecR_HhH RNA_ligase DUF3701 Motif Other DBs NCBI-ProteinID:  ABP83223 UniProt:  A4XPF7 LinkDB All DBs Position complement(480654..482342) Genome browser AA seq 562 aa AA seqDB search MLAMKRWIAPLLLPLIAQAEPCPDWPDSRAQVEFAALSQQIAQWDDAYHNQGRSPIADEL YDQARERLQRWQQCFAPARQPLPEPLTGSAGPIAHPVPQTGLRKLNDAAIGEWIGSRDDL WIQPKVDGVAVTLVYRQGRLHQAISRGDGRHGQDWSARARQLPAVPTRLPEALDLVLQGE LYWRLEDHLQARDGGAGARGKVAGMMARHELSDTDGAAIGLFVWDWPDGPASMDERLSQL QALGFADSQHYSKPIRSVEEARQWRQHWYRHRLPFASDGVVLRQGTRPAGARWQAEAPHW AVAWKYPASQALAVVQAVDFRIGRSGRITPVLRLQPVDLDDRRISRVALGSVPTWKSLDV RPGDQVAIRLAGLTIPRLDSVIWRSPHRAPVEVPRSADYHALSCWRSSPSCQHQFQARLA WLSSKQGLALSGVGPGTWSSLPLQGLLDWLELDKAQLQSLPGIGPRRAAQLQQAFAQARD RPLQQWLRALGAPPGFDAGGLDDWPSLIERQRDDWLRRPGVGPKGADRLLAFFSHPEVQR LGRQLQQAGVAGFQPQAGPPRS NT seq 1689 nt NT seq  +upstreamnt  +downstreamnt atgcttgccatgaagcgctggatcgctccgctcctcctgcccctcatcgcccaggccgaa ccctgccccgactggccggacagccgcgcccaggtggaattcgcggcgctcagccaacag atcgcgcagtgggatgacgcctaccacaaccagggccgctcgccgatagccgacgagctc tacgaccaggcccgcgagcgcctgcagcgctggcagcaatgtttcgcgcctgcacgacag cccctgccggaacccctcacaggcagcgcagggccaatcgcccatcccgtcccgcaaacc ggtctgcgcaagctcaacgacgcggcgatcggcgaatggatcggcagccgcgacgacctg tggatccagcccaaggtcgatggcgtggccgtcaccctggtctatcggcaaggccgcctg caccaggccatcagtcgtggcgacggccgccacggccaggactggagcgcacgcgcccga cagttgcctgctgtcccgacgcggctgcccgaggcgctcgacctggtgctgcagggcgag ctgtactggcgcctcgaggatcacctgcaggcgcgcgatggcggcgccggagcgcgcggc aaggtggccggaatgatggccaggcacgagctgagcgacacggacggcgccgccatcggc ctgttcgtgtgggactggccggacggcccggcgagcatggacgaacgcctgagccagctg caggcgctgggtttcgccgacagccagcactacagcaagccgatccgcagcgtcgaagaa gccaggcaatggcgtcagcattggtatcgccatcgcctgcccttcgccagcgatggcgtg gtgctgcgccagggcacgcgccccgccggcgcgcgctggcaggcggaggccccgcactgg gcggtggcctggaagtacccggccagtcaggcgctggcggtggtgcaggccgtggacttt cgcatcggccgcagtgggcgcatcacgccggtgctacgcctgcagccggtcgatctcgac gacaggcgcatcagccgcgtggccctcggctcggtcccgacctggaagagcctcgacgtc cgccccggcgaccaggtggcgatccgcctggccggcctgaccatcccacgtctggacagc gtgatctggcgcagcccgcaccgggcgccggtcgaggtaccgcgcagcgcggactaccat gccctcagctgctggcgcagcagcccgtcctgccagcatcagttccaggcccgtctggcc tggctgagcagcaagcaggggctggcgctgagcggggtgggcccgggcacctggagcagt ctgcccttgcaggggctgctcgactggctggagctggacaaagcccagctgcagagcctg cccggcatcggcccgcgccgcgctgcacagctgcagcaggccttcgctcaggccagggac cgaccgctgcagcaatggctgcgtgccctcggcgcacctccgggtttcgacgccggcggg ctcgacgactggcccagcctgatcgagcgccagcgagacgactggctgcgtcgccccggc gtcggccccaagggtgccgatcgcctgctggcgttcttcagccaccccgaagttcagcgc ctgggcaggcaactgcagcaggccggtgtcgccggtttccagccccaagcaggcccgcca cgcagctga

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