KEGG   Ectopseudomonas mendocina ymp: Pmen_1398
Entry
Pmen_1398         CDS       T00510                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
pmy  Ectopseudomonas mendocina ymp
Pathway
pmy03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pmy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Pmen_1398
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmy03400]
    Pmen_1398
Enzymes [BR:pmy01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Pmen_1398
DNA repair and recombination proteins [BR:pmy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Pmen_1398
 Prokaryotic type
     Pmen_1398
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S Ogg-HhH HHH_5 RecR_HhH HHH_8 DUF2400
Other DBs
NCBI-ProteinID: ABP84163
UniProt: A4XS47
LinkDB
Position
complement(1561092..1561730)
AA seq 212 aa
MNAAKRLEIFRRLHEDNPEPKTELAYSTPFELLVAVTLSAQATDVSVNKATAKLFPVANT
PEAIYALGVEGLSEYIKTIGLYNSKAKNVIEACRILIEKHGSQVPDNREDLEALPGVGRK
TANVVLNTAFRQLAMAVDTHIFRVSNRTGIAPGKNVVEVEKKLLKFVPKDYLLDAHHWLI
LHGRYVCTARKPRCGACRIEDLCEYKAKTSDD
NT seq 639 nt   +upstreamnt  +downstreamnt
atgaacgccgccaaacgcctggaaatcttccgtcgcctgcacgaggacaaccccgagcca
aagaccgagctggcctacagcacgcccttcgagctgctggtagcggtgacgctatcggcc
caggccaccgacgtcagcgtcaacaaggccacggccaagctgtttccggtggccaatacg
ccggaggccatctacgccctgggcgtcgagggactttccgagtacatcaagaccatcggc
ctgtacaacagcaaggcgaagaacgtcatcgaggcctgccgcatcctcatcgagaagcac
ggcagccaggtgccggacaaccgcgaggacctcgaagccctgcccggcgtcggccgcaag
actgccaatgtggtgctcaacaccgctttccgtcagctggccatggccgtggacacgcac
atcttccgcgtcagcaaccgcaccggcatcgcgccgggcaagaacgtggtcgaggtggag
aagaagctgctcaagttcgtgcccaaggattatttgctcgacgcccaccactggctgatc
ctgcacggacgctacgtctgcaccgcacgcaaaccacgctgtggcgcctgccgcatcgag
gatctgtgcgagtacaaggccaagacttccgacgattga

DBGET integrated database retrieval system