Polaromonas naphthalenivorans: Pnap_3422
Help
Entry
Pnap_3422 CDS
T00459
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pna
Polaromonas naphthalenivorans
Pathway
pna00300
Lysine biosynthesis
pna00550
Peptidoglycan biosynthesis
pna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pnap_3422
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pnap_3422
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pna01011
]
Pnap_3422
Enzymes [BR:
pna01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Pnap_3422
Peptidoglycan biosynthesis and degradation proteins [BR:
pna01011
]
Precursor biosynthesis
Amino acid ligase
Pnap_3422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
Motif
Other DBs
NCBI-ProteinID:
ABM38719
UniProt:
A1VSU1
LinkDB
All DBs
Position
complement(3629555..3631045)
Genome browser
AA seq
496 aa
AA seq
DB search
MQLHTPEQAACWLHERVIGTLSADSRKAGQGDGFIAWPGAATDGRNYVNAALAAGASACL
VEHAGAQAYGFNDDRVATYAGLKAATGPMAAAYFGAPSEQLQVTAITGTNGKTSTAWWLA
QALGRLGRKCGIVGTLGIGEPGAMVANGLTTPDPVLLQQQLRRFADEGFAACALEASSIG
LEEGRLDGTRIQIAVFTNFTQDHLDYHASMPDYWRAKQMLFNWPGLRAAIINVDDSRGLE
LSAALAGTSLDVWTLSCAGPARLQAQAICQGAHDLSFDVVEGGERHRISTPMVGLYNVSN
LLGVMASLRAMDVPLADAVAACADLLPVPGRTETLAVPGLPLVVIDYAHTPDALEKVLTA
LNPVAQGRGGRLWCVFGCGGDRDAGKRPLMAAAAEKNADQLVITSDNPRSEDPVTIIGQM
LKGLSRPQVAHVQEDRRAAIAHALQLAQPQDVVLLAGKGHENYQEIKGVKFAFSDRDQAQ
AILDALVATRQAEEAA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttcacacccctgagcaagccgcctgctggctgcatgagcgcgtcataggtacg
ctctcggccgacagccgcaaggcaggccagggcgacggttttatcgcctggccgggtgcg
gccaccgatggccgcaactatgtcaatgccgccctggctgccggagcaagcgcctgcctg
gtcgaacatgcgggcgcgcaggcttacggtttcaatgatgaccgggttgcaacttatgcg
ggactcaaggcggcaaccggcccaatggccgctgcttattttggagcgcccagcgagcag
ttgcaggtaacggccatcaccggcaccaatggcaagacctccacagcttggtggctggcg
caggccctcggccggctgggccgcaaatgcggcattgtcggaacgctgggcattggcgag
cccggtgccatggtggccaacgggctgaccacgcccgaccctgtgctgctgcagcagcaa
ctgcggcgttttgcggatgaaggcttcgccgcctgtgcccttgaagcctcttcgattggc
cttgaagaggggcgcctggatggaacacgcatacagattgctgttttcaccaatttcacc
caggaccatctcgactaccacgcgtccatgccggactactggcgcgccaagcagatgctg
ttcaactggcctggtctgcgcgcggccatcatcaatgtggacgatagccggggcctggag
ttgagcgctgcgctggcgggtacttcgctggacgtctggaccttgtcgtgcgccggtcct
gcaaggcttcaggctcaggccatctgccaaggcgcgcatgacttgagctttgacgtggtt
gaaggcggcgagcgccacagaatttcaacccccatggtcggcctctacaacgtgtcgaat
ttgctgggcgtcatggccagcctgcgggcaatggatgtgccgctggccgacgccgtggcg
gcctgtgccgacctgttgcccgtgcccggtcgcaccgaaaccctggcagttcccggtctg
cccttggttgtcattgattacgcgcacacgcccgatgcacttgaaaaagtgctgacggcg
ctcaacccggttgcacagggccggggcggccggctctggtgtgtttttggctgcggtggt
gaccgtgatgccggcaaacgccccttgatggcggctgcggcggaaaaaaatgcagatcag
ctggtgatcaccagcgacaacccgcgcagtgaagaccctgtgaccatcatcgggcagatg
ctcaaggggctgagccggccacaggtcgcgcatgtgcaggaagaccggcgtgcagccata
gcccatgcgctgcaactcgcccagccgcaggatgtcgtcctgctggcgggcaaaggacat
gaaaattatcaggagatcaagggagtgaagtttgcattttctgaccgggaccaggcgcaa
gccatcctggatgccctggtggcaacgcgccaagcggaggaggccgcatga
DBGET
integrated database retrieval system
