Pieris napi (green-veined white): 125063453
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Entry
125063453 CDS
T08706
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125063453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnap03041
]
125063453
Spliceosome [BR:
pnap03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
125063453
Complex C
U5 SnRNP specific factors
125063453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
TniB
Ras
Motif
Other DBs
NCBI-GeneID:
125063453
NCBI-ProteinID:
XP_047525845
LinkDB
All DBs
Position
3:complement(11492180..11508748)
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AA seq
976 aa
AA seq
DB search
MDGELYDEFGNYIGPDLESESEDEQSIYGGDNREADDEAMEEDEDADAEPEVAPMSVVLH
EDKRYYPQAIEVYGPDVETVVQEEDTQALDKPLIEPVKHKKFQLQEQQLPHTVYDMEYLA
DMLDNTNLMRNITLMGHLHNGKTSFIDCLMRQTHPDTINNDTTIPMRYTDTLFVEQERGV
SIKSMPVTLLLKDIKGKSHLLNIMDTPGHVNFSDEVTAALRISDGAILFVDAAEGIMLNT
ERLLRHAVQERVPLTICINKIDRLILELKLPPADAYYKLRHIIDELNSVCETTHSQDNPD
EPVTVFSPLLGNVCFASSLYDVCFTLESFAAMYANTHSSSGLRASDMAAWLWGDVYFNAK
TRRFSKKQPHSSAQRSFVEFILEPLYKIFAQVVGDVDTTLPDVLAELGIKLTKQESKLNV
RPLLRLVCSRFFGDFCGFVDMVTRHVPSPLDAAPRKVAHCYRGASGPLYDDMLNCDQSGR
LVAHTTKMYPTDDCTFFLVLARIMSGTLYAGQTVRVLGENYSTQDEEDSRMMNVGRLWIF
EARYKVELNRVPAGCWALIEGIDQPIVKTCTLVSADEEEELHTFKPLRFNTQAIVKIAVE
PVNPSELPKMLDGLRKVNKSYPVLSTRVEESGEHVILGTGELYLDCVMHDLRNMYSEIDI
KVADPVVSFCETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAGAVCVTWDRKR
LGEFFQTKYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKHLLASVKDSIVQGFQWG
TREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLF
VEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFVPAIDSFGFETDLRTHTQG
QAFCLQVFHHWQIVPGDPLDKSIIIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFF
DDPMLLELARQDVQFN
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgaactgtacgatgagttcggcaactatatcgggccggacttagaatctgaa
tcagaagatgagcagagtatatatgggggtgataatcgggaggcagatgatgaggctatg
gaagaagacgaggatgctgatgcagagcctgaagtggcgcctatgtctgtcgtacttcat
gaggacaaacgctactatccacaagccattgaagtatatggtccagatgttgaaacagtt
gttcaagaagaagacacccaagccctggacaagccactgattgagccagttaaacataaa
aagtttcaactccaagagcaacagttgccacacactgtatatgatatggagtatttggct
gatatgcttgataatacaaatttaatgagaaatatcaccctgatgggacatttacataat
ggaaaaacatcatttattgactgtttaatgcgtcaaacacaccctgacacaattaataat
gatacaaccataccaatgagatatacagacactctgtttgttgagcaagaaaggggggtg
tctattaaatcaatgcctgtgacactccttttaaaggacataaagggaaagtcccatttg
ctgaatatcatggataccccaggacatgttaattttagtgacgaagtaactgcggcttta
agaatttctgatggtgccattctatttgttgatgctgctgaaggcataatgctaaatact
gaacgattactccgtcatgcggtacaagaacgagttccacttacgatttgtatcaacaaa
attgacagattgattttggaactcaaacttcccccagcagatgcttattataaattgaga
catattattgacgagctgaactcagtttgtgaaaccactcactcgcaagataatcctgat
gaacctgtgactgtcttctcgcctttgttgggaaacgtctgctttgcatcttcactctac
gatgtctgttttacattggagtcgtttgccgcaatgtatgctaatacacatagttcaagt
ggcctaagagcttcagatatggcagcttggctatggggagatgtttacttcaatgccaaa
acaaggcggttcagcaagaaacaaccacactcttctgcacagagaagttttgtggaattt
attttggagccattgtataagatattcgcacaggtggtaggagatgtagacaccactcta
ccagatgtattagcggagttaggtatcaaattgacaaagcaagagtccaaattaaatgtg
cgtccattattgcgacttgtatgcagtcggttctttggtgatttttgcggcttcgtggat
atggtgacccgccatgtgccgtccccgttggacgctgccccgcgtaaagtggctcattgt
tatcgtggtgcttctggtccgttatacgatgacatgctcaattgtgatcagtcaggtcga
ctcgtcgctcatacgactaagatgtatccgactgatgattgcacattctttttggtactt
gccagaataatgtcaggcacgttatacgcggggcagacggttcgagtgttaggtgaaaac
tacagtacacaagatgaagaagattctaggatgatgaacgttggacgactttggattttt
gaagccagatataaggtagaattaaacagagtaccagcaggatgctgggcgctcatcgaa
ggtatcgaccagcctatagtgaagacgtgtacccttgtctcagctgacgaggaggaggaa
cttcataccttcaaacccttgaggttcaacactcaagccattgttaaaatagctgtggaa
cctgtcaacccttcggagctgccgaagatgcttgatgggttgaggaaagtgaacaaatct
tatccagtactttcaacaagagtggaagaaagcggtgaacatgttatattgggaacgggc
gagctatatctggattgtgttatgcatgatctcaggaatatgtactcggagattgatatt
aaagtggctgatccggtggtatcattctgtgagacggtagtggaaacatcttcactcaaa
tgtttcgcggagacaccgaataagagaaacaaattgacaatgatagctgaacctttggaa
cgaggattagctgaagacatcgaggctggagctgtttgtgtcacgtgggacaggaagaga
ttgggagagttcttccagacaaaatacgactgggacttgctagccgctcgatcaatttgg
gcgttcggaccagattcgacgggtccaaatatattggtcgatgatacgctaccctcagag
gttgacaagcatttgctggcctccgtcaaggatagtattgttcaaggtttccaatggggt
acgagggaaggtccattatgtgaagagccgatacgaaatgtgaaatttaaaattttggac
gcggtgatcgcccaagagcccttacatcgtggtggaggacagataatacctacagctaga
cgggtggcatattcagctttcttaatggcaacaccacggttgatggagccctatttgttt
gtggaagtgcaagcaccagctgattgtgtgtcggcggtttacacagttttagctaaacgg
agaggtcatgtaactcaagatgcaccggtgcctggttctcccttatatacaatcaaggca
tttgtgccagccatagattcgttcggctttgagaccgatttacgaactcacacgcaggga
caggccttctgcctgcaagtgttccatcactggcagattgtgcctggagatccgttggat
aagagtataattatacggcccttagagccccagccagcaactcacttggctcgtgaattc
atgataaagacacgtagacgtaaggggcttagtgaagatgtctctattaacaagttcttc
gacgatcctatgttgttggagcttgctcgacaagatgttcagtttaattaa
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