Pirellulimonas nuda: Pla175_35320
Help
Entry
Pla175_35320 CDS
T06953
Symbol
pdg_2
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pnd
Pirellulimonas nuda
Pathway
pnd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pla175_35320 (pdg_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnd03400
]
Pla175_35320 (pdg_2)
Enzymes [BR:
pnd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Pla175_35320 (pdg_2)
DNA repair and recombination proteins [BR:
pnd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pla175_35320 (pdg_2)
Prokaryotic type
Pla175_35320 (pdg_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
QDU90131
UniProt:
A0A518DF76
LinkDB
All DBs
Position
complement(4472675..4473346)
Genome browser
AA seq
223 aa
AA seq
DB search
MAKKAPSDDLPERKKQAARVVRRLRADYPDAECALRFDSPLQLLVATILSAQCTDERVNL
VTKVLFAKYPTAADLAGLPIAKLETLVKSTGFFRNKAKAIKACCTELVQKHDGQPPRDLE
TLVGLAGVGRKTASVVLGTAYGIPSGVVVDTHVGRLSRRLGLTDQTDAVRAERDLMEVLP
KKQWIDFSHRMIHHGRAVCGARRAKCDACSMAGFCPRIGLEGR
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaaggcccccagcgacgacctccccgagcgcaagaaacaggccgcccgggtc
gtccgccggctgcgggccgactaccccgacgccgagtgcgccctgcggttcgactcgccc
ctgcagctgctggtggccaccatcctctcggcccagtgcaccgacgagcgcgtgaacctg
gtcaccaaggtgctgttcgcgaagtaccccacggccgccgacctcgccgggctgccgatc
gccaagctggaaaccctggtcaagagcaccggcttcttccgcaacaaggccaaagcgatc
aaggcctgctgcacagagctggtccagaagcacgacgggcagccgccgcgcgacctcgag
accctggtcggcctggccggcgtcggccgcaagacggccagcgtcgtgctcggcaccgcc
tacggcatccccagcggcgtggtggtcgacacccacgtcggccgcctcagccgccggctc
ggcctaaccgatcaaaccgacgcggtccgggccgaacgcgacctgatggaggtgcttccg
aagaaacagtggatcgacttttcgcaccgcatgatccaccatgggagggccgtgtgcggc
gcgcgacgcgccaagtgcgatgcctgctcgatggccggcttctgccctcgcatcgggctg
gagggacgatag
DBGET
integrated database retrieval system
