KEGG   Pelagibacterium nitratireducens: V6617_00825
Entry
V6617_00825       CDS       T11031                                 
Name
(GenBank) NAD-glutamate dehydrogenase
  KO
K15371  glutamate dehydrogenase [EC:1.4.1.2]
Organism
pnf  Pelagibacterium nitratireducens
Pathway
pnf00220  Arginine biosynthesis
pnf00250  Alanine, aspartate and glutamate metabolism
pnf00430  Taurine and hypotaurine metabolism
pnf00910  Nitrogen metabolism
pnf01100  Metabolic pathways
pnf01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:pnf00001]
 09100 Metabolism
  09102 Energy metabolism
   00910 Nitrogen metabolism
    V6617_00825
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    V6617_00825
   00220 Arginine biosynthesis
    V6617_00825
  09106 Metabolism of other amino acids
   00430 Taurine and hypotaurine metabolism
    V6617_00825
Enzymes [BR:pnf01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.1  With NAD+ or NADP+ as acceptor
    1.4.1.2  glutamate dehydrogenase
     V6617_00825
SSDB
Motif
Pfam: Bac_GDH_CD GDH_C GDH_HM1 GDH_HM3 GDH_ACT2 GDH_ACT1 GDH_ACT3 ELFV_dehydrog GDH_HM2
Other DBs
NCBI-ProteinID: WWT33052
LinkDB
Position
complement(159985..164742)
AA seq 1585 aa
MIDSTETLRPWRDRLVALRSENPQLARFVTNALRSADEQDLLLYPAQTLQDLLATTFSHI
GQRTPGKAEIRVWTPDAEIVSGITIIDIYSADTPFIVDSALAAIRAAGGSIRFMTHPAVA
VDDTTSPWQVIEDTEGARKESVLQVHIDTPADPRALSVISEELTQTMAQVRAAVVDWREM
LERLRTAVVAYRSHPPAMREQALTEAIHFLAWLADHNFTFLGMRQYRLSGEGSEQTLIPL
EGSGLGILRDPDYLYLRQGTRYVHMNDQHLAFLDTDEPLMVTKANRRALVHRRVHMDYVG
IKTFDPDGTITGELRILGLFTSASLSTPVSDVPLIRRKIAQVMAQSGFDPRSHAGKALMN
TLDNYPRDELFQISQDELFEFANVIATLPDRPRVRVLPRIDRFDNFVSVLVYLPRDRFDS
NVRARIGEHLANRYDGRVSAFAPDFPEGDLARVHFIIGRNGGATPRPDREALEAEISELT
RTFADRLLSAAPHAGDIADYASAFSADYQVAHSHADALDDIAVFKALGPDNPLAVRLNRG
TEGPTSLTLNVYHRADPIPLSARVPMLENFGFSVIDERTFTIRPLGPQPRFLHAMSIRTA
DDSEIDLGESARRIEDGILAVSSGLVENDGYNRLTLTAGLGHTDVAILRALGRYLKQVGI
AWSQTYIWTALSVHPATARALVELFHTLHDPHLDADREAAAEGLRAEIAAGLESIVWIDE
DRIIRRMLNLIETSVRTNLYQRVDGKPRPALAIKFDATLLEGIPQPRPWREIFVYSPRVE
GIHMRGGPIARGGLRWSDRAEDFRTEILGLVKAQMVKNAVIVPVGAKGGFVPRLMPANPD
RDTFLAEGTACYKIFVSSLLDVTDNLVGDTVLPPEEIFRRDADDPYLVVAADKGTASFSD
TANAISQSRDYWLGDAFASGGSAGYDHKKMGITARGGWEAVKRHFREIDIDIQTQPFTVA
GVGDMSGDVFGNGMLLSPKIRLVAAFDHRDIFIDPDPDIEKSFAERERLFALPRSSWQDY
DTALISEGGGVFSRQVKSIPLSPQMQTLLGLTGVSASPSEIMSAILRADIDLLWFGGIGT
YIRATEETDASVGDKANDAIRVPAQAVCARVIGEGANLGLTQRGRIEYALNGGRINTDAI
DNSAGVNSSDLEVNIKIALSDMVRSGTLAMEDRNVFLTEMTDEVAALCLRNNYLQTLALS
LAQRRGMADFPDLVDFIDELEASGELNRAVEYLPDDAMLAERAAGGEALTRPELAVLLAY
AKLTLYSDLLKSPVPDDPYLARELFRYFPQTLKSRYPESIENHRLRREVIATVLSNAMIN
RGGPAFVTRLTAITAAEPGAVAFAYAAARDSFDLAGLNAAIDALDTTISGDTQLALYAEV
QGLQVGMALWFLRNEDFSDGLSDMIERYRTGISTIRAALSDLVSPFLAEAIASQEQAFEA
GGTPPDLARSISALSVLSLAPDAVLVARKCNAEVLDAAKAMFAVIEMFRLGRLTEQGAAI
DAADRFDRMAIDRALANLTRGLRDLSADILSSGDGPVEDRIAAWKTPRAATISRMGETVA
DLIAGDLTISRLSVAAGLLSDLATS
NT seq 4758 nt   +upstreamnt  +downstreamnt
atgatcgatagcaccgaaaccctgcgcccctggcgtgatcgcctggtcgcgctgcggtcc
gaaaacccgcagctggcgcggttcgtgaccaatgcgctgcgctcggccgacgaacaggac
ctgctgctctatccagcgcaaacgctccaggaccttctggccaccaccttctcccacatc
ggccaacgcactccgggcaaggccgagatccgcgtctggacccccgacgccgagatcgtg
tcgggtataacgatcatcgacatctattcggccgacaccccgtttatcgtcgattcggcc
ctggcggccataagagccgccggcggttcgatccggttcatgacccatcccgccgttgcg
gtggacgacaccacctctccctggcaggtgatcgaggacaccgaaggcgcccgcaaggaa
agcgtgctccaggtccatatcgacacgcccgccgacccccgggcgctctcggtcatttcc
gaagaactgacccagaccatggcgcaggtgcgcgccgctgtcgttgactggcgcgaaatg
ctcgaacgcctgcgcaccgcggttgtcgcatatcgatcccatcccccggccatgcgcgaa
caggcgctgaccgaggcgatccattttcttgcctggctggcagaccacaatttcaccttc
ctgggcatgcgccaataccggctgtccggggaaggcagcgagcagaccttgatccctctc
gaaggatcgggcctgggcatattgcgcgaccccgattatctctatttgcgccagggcacg
cgctacgtccatatgaacgaccagcatctggcgtttctcgacaccgacgagccgctgatg
gtcaccaaggccaatcggcgtgcacttgtgcacaggcgcgtgcatatggattacgtgggc
atcaagaccttcgatccagacggcacgatcaccggcgaattgcgcatattggggcttttc
acctccgcgtcgctgtccaccccggtgagcgatgtcccgctgatccggcgcaagatcgct
caggtgatggcccaatcgggcttcgatccgcgttcgcacgccggcaaggcgctcatgaac
acgctggacaattaccctcgagacgagctgttccagatttcccaggatgagcttttcgaa
ttcgccaatgtgatcgccaccctgcccgaccggccgcgtgtgcgggtgctgccccgcatc
gacaggttcgacaatttcgtctcggttctggtgtacctgccccgcgaccgcttcgattcc
aatgtccgcgcccggatcggcgaacatctcgccaaccgctacgacgggcgggtttccgcc
ttcgcccccgactttcccgaaggcgatctggcacgggtccatttcatcatcgggcgcaat
ggcggcgccactccgcgccccgaccgcgaggcgctggaagccgaaatttccgagctgact
cgcacctttgccgatcgcctgctttcggcagcgccccatgcgggcgacatcgccgattat
gcaagcgccttttccgccgattaccaggtggcccattcccacgccgatgcccttgacgat
atcgccgtattcaaggcgctgggccccgacaatccactggccgttcggctgaaccggggg
accgaaggccccaccagtctcacgctcaacgtctatcaccgcgccgatcccatcccgctt
tcggcccgcgtcccgatgctggagaatttcggattttcggtgatcgacgagcgcaccttc
accatacgcccgctcgggccgcagccgcgctttctgcacgccatgtcgatcaggaccgcc
gatgacagcgagatcgatctgggcgaaagcgcaagacgcatcgaggacggtatccttgca
gtttccagcgggctcgttgaaaatgacggctacaaccgtctgaccctgacggccgggctc
ggccacaccgacgtcgccatcctgcgcgccctgggacgctatctcaaacaggtcggcatc
gcctggtcgcagacttacatctggacggcgctttcggtccatccggccaccgcccgcgcg
ctggtcgaattgttccacaccctgcacgatccccatctcgacgccgaccgtgaagcggca
gccgaaggcctgcgcgctgaaattgccgccgggctcgaatccatcgtctggatcgacgag
gaccggatcatccggcggatgctcaatctgatcgaaacgagcgttcggacaaatctctac
cagcgcgtggacggcaagccacgcccggcgctggccatcaaattcgacgccaccctgctc
gaaggcataccccagccacggccatggcgtgaaattttcgtctattccccgcgcgtcgag
ggcatccatatgcgcggcggaccgattgcccgcggcgggctgcgctggtcggaccgcgcc
gaagacttccggaccgaaatcctgggactggtcaaggcccagatggtcaagaacgcggtg
atcgtgccggtcggcgccaagggcgggttcgtgccgcgcctcatgcccgccaatcccgac
cgcgacaccttccttgccgaaggcaccgcgtgctacaagattttcgtctccagcctgctc
gatgtgaccgacaatttggtcggcgatacggtcctaccgcccgaagagattttcaggcgc
gacgctgacgatccctatctcgttgtcgccgccgacaagggcacggcgagcttttccgat
acggcaaacgcaatatcccaatcccgcgactactggcttggcgatgccttcgcctcgggc
ggatcggccggatatgaccacaagaagatgggcattaccgcgcgcggcggctgggaggcg
gtcaaacgccactttcgcgaaatcgatatcgatatccagacccaacccttcaccgtggcc
ggcgtgggcgacatgagcggcgacgtgttcggcaacggcatgctgctctcgcccaaaatc
cggctggttgccgcctttgatcaccgcgacatcttcatcgatcccgaccccgacatcgaa
aagagttttgccgagcgcgagcgcctgttcgcgctgccgcgctcgagctggcaggattac
gataccgcgctgatttccgagggcggcggggtattttcgcgccaggtcaagtccatcccg
ctttccccccagatgcagacgctcctgggcctgaccggggtcagcgcctcgccgagcgaa
atcatgtcggcgatcctgcgggccgatatcgaccttttgtggtttggcggcatcggcacc
tatatccgcgccaccgaggaaaccgacgcttcggtgggcgacaaggccaacgacgcgatc
cgggttccggcacaggcggtgtgcgccagggtgatcggcgaaggagccaatctcgggctc
acccagcgcggacgcatcgaatatgcgctcaatggcgggcgcatcaacaccgacgccatc
gacaattcggccggcgtcaactcgtccgaccttgaggtcaacatcaagatcgcgctgtcc
gatatggtgcgctcgggcaccctggcaatggaagaccgcaatgtctttctcaccgagatg
actgacgaggtcgcagcgctttgcctgcgcaacaattatctccagaccctcgcgctctcg
ctcgcccagcggcggggcatggccgactttcccgatcttgtcgatttcatcgatgaactc
gaagcgtcaggcgaactcaacagggccgtcgaatatctgcccgacgacgccatgctggcc
gaacgggccgccgggggagaggccctgacccggcccgaactggccgtgctgctcgcctat
gccaaattgacgctctatagcgatttgctcaaatccccggttcccgacgatccctatctg
gcccgcgagctgttccgctattttcctcaaacgctgaaatcgcgctaccccgagtccatc
gaaaaccatcgcctgcggcgcgaagtgatcgccacggtgctctccaacgccatgatcaat
cgcggcgggcccgctttcgttacacgattgaccgcgatcaccgctgccgaaccgggcgcc
gtggcctttgcctacgctgcagcccgcgacagtttcgatctggccggtctcaacgcggca
atcgatgcgctcgacacgaccatttccggagatacccagcttgcgctttatgccgaggtc
cagggccttcaggtgggcatggcgctgtggtttctgcgcaatgaggatttttccgacggg
ctgtcggacatgatcgagcgttaccgcaccggcatatcgacgataagggccgcgctgtcc
gatctcgtctcccccttcctcgccgaggccatcgcgagccaagagcaggcctttgaagcc
ggcggcacgccgcccgatcttgcccgatccatttccgcgctctctgtgctttcgctggcc
cccgatgccgtgctggtggcccgtaaatgcaatgccgaggtgctcgatgccgccaaggcg
atgtttgccgtgatcgaaatgttcaggctaggccggctgaccgaacagggcgcggcgatc
gatgccgccgacaggttcgaccgcatggcgatcgacagggctctggccaatctcacccgt
ggcctgcgcgacctgtcggccgatattttgtcgtccggcgatgggccggtggaggaccgg
atcgcggcctggaagacaccgcgtgccgccacgatttcccgcatgggcgaaactgttgcc
gatctgatcgccggtgatctgaccatttcacggctttcggtcgccgcgggactgttgagc
gatctggctacaagctag

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