KEGG   Pelagibacterium nitratireducens: V6617_13685
Entry
V6617_13685       CDS       T11031                                 
Symbol
putA
Name
(GenBank) trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
pnf  Pelagibacterium nitratireducens
Pathway
pnf00250  Alanine, aspartate and glutamate metabolism
pnf00330  Arginine and proline metabolism
pnf01100  Metabolic pathways
pnf01110  Biosynthesis of secondary metabolites
Module
pnf_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:pnf00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    V6617_13685 (putA)
   00330 Arginine and proline metabolism
    V6617_13685 (putA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pnf03000]
    V6617_13685 (putA)
Enzymes [BR:pnf01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     V6617_13685 (putA)
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     V6617_13685 (putA)
Transcription factors [BR:pnf03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    V6617_13685 (putA)
SSDB
Motif
Pfam: Pro_dh Aldedh Pro_dh-DNA_bdg PRODH
Other DBs
NCBI-ProteinID: WWT32052
LinkDB
Position
2765810..2769478
AA seq 1222 aa
MPASHTSPFEAFSDRPLKTDTALREAITSAYRLAETEVVPALIEAAAVDPKRAKAIRATA
EKAVKGIRAKGNGGGVEGLMHEYALSSQEGIALMCLAEALLRTPDNSTRDLLIADKIAPG
NWQKHLGLDRSVFVNAATWGLVVTGKLVTPVDESGLSNALSRIVARSGEPVIRAGVKMAM
RMLGEQFVAGQDIGEALKNARSWEAKGFGYSYDMLGEAATTAHDAERYMAEYVGAIHAIG
KASAGKGPYGGPGISIKLSALHPRYARTKYDRVMAELLPRLKALAALAKSYDIGLNIDAE
EMDRLELSLDLLEALATDPDFDGWNGIGFVVQAYSKRCPLVLDWIIDLARRSGHRIMVRL
VKGAYWDSEIKRAQMDGLEDFPVFTRKVHTDVSYIACAKKLLAARDVVFPQFATHNAQTM
ATIYELAGSDFELGSYEFQCLHGMGEPLYEQVVPKDKLNRPCRIYAPVGSHETLLAYLVR
RLLENGANSSFVNQIADEDVPVDRLIADPVEMARQIAPVGTPHEQIDLPKDILAAGRRNS
RGIDLSNEQVLRALEKSLKAGAERAWVAKAEDAKGEARPVLNPADHRDVVGEVIEPSVDQ
IDAIMARAQRAASGWATTPPAERGAMLMRAAGAMESQMEIFMSLAMREAGKTAANAIAEV
REAVDFLRYYGKQVKESFANDTHIPLGPVVCISPWNFPLAIFTGQMSAALVAGNPVIAKP
AEETPLIAQLAVDLMHAAGVPADVLQFAPGDGKVGAALVGHQATCGVMFTGSTEVARLIQ
KQLAGRTLANGTPVPLVAETGGQNALVVDSSALTEQVVLDVLASAFDSAGQRCSALRVLC
LQEEVADKTLDMLKGAMAQLDIGNPDRLTIDVGPVITAEARDGINGHIEAMRAKGCAVTQ
LDLPELAEQGTYVPPTLIELGDISELGREVFGPVLHVVRFKRKNLDGLLEKINALGYGLT
FGLHTRIDATIAEVSARIEVGNIYVNRNQIGAVVGVQPFGGHGLSGTGPKAGGPLYLRRL
VQTTSQTVWGLPARQAGPTLVTLAEWLRGNSQDDLAEVTLNYANHPAINAFSELDGPVGE
RNTYLTKPKGKVLLSARTLTGLVHGLAAGLAAGNQMLVEAFGDLGSVVRDLPEDIRQRVE
MVREIGSGAARAVLVEGDGEAVTAMSKAVAEWDGPIVTVQGVSSEALEHGEAVFAIDLLV
DEVSTSVNTAAAGGNASLMALA
NT seq 3669 nt   +upstreamnt  +downstreamnt
atgccggcatcgcacacttcccctttcgaagcgttttcggatcgtccgctcaagaccgat
acggcgctgcgcgaagcgatcacttcggcctatcggttggccgagaccgaagtcgttccg
gccctgatcgaggctgcagccgtcgatccgaaacgggcaaaggccattcgcgctaccgca
gaaaaggccgtcaaaggcatccgcgccaagggcaatggcggcggggtcgaggggttgatg
cacgaatatgcgctctcgagccaggagggcatcgcgcttatgtgcctggccgaggcgctg
ttgcgcacgcccgacaattccacccgcgaccttttgattgctgacaagattgcaccgggc
aactggcagaaacatctcggactcgaccgttcggtgttcgtcaacgcggcgacctggggg
ctggttgtgaccggcaagctcgtgacgcccgtcgatgaatcgggattgtccaatgcgctg
tcgcggatcgtggcgcggtcgggcgagccggtgatccgggccggtgtgaaaatggcgatg
cgcatgctgggcgaacaattcgtcgccgggcaggacatcggcgaagcgctcaagaacgcc
agatcgtgggaggccaaggggtttggctattcctacgacatgctgggagaggccgcgacc
accgcccatgacgccgagcggtatatggccgaatatgtcggggcgatccatgccatcggt
aaggcctcggcgggcaaaggaccctatggagggccgggcatctcgatcaagctttcggcg
ctgcacccgcgctatgcccgcaccaagtatgatcgtgtgatggcagaattgttgccgcgt
ctcaaggcgctggcggcgctggcgaaatcctacgacatcgggctcaacatcgatgcggaa
gagatggaccggctcgaactctcgctcgatctgctcgaagcgctggccaccgatccagat
ttcgacggctggaatgggatcggattcgtggttcaggcctattccaagcggtgccctctc
gttctggactggatcatcgatctggcccggcgctcggggcaccggatcatggtgcggctg
gtcaagggcgcgtattgggacagcgagatcaagcgcgcgcagatggacgggcttgaagac
tttccggtgtttacccgcaaggtgcataccgatgtgagctatatcgcctgcgccaagaag
ctgctggcggcgcgggacgtggtgtttccgcagtttgcgacgcacaacgcgcagaccatg
gcgacgatttatgaattggccgggtccgattttgagctcggcagctatgaattccagtgc
ctgcacggcatgggcgaaccgctttacgagcaggtggtgcccaaggacaagctgaaccgt
ccctgccgcatctacgcgccggtggggagtcacgaaacgctgctggcctatctggtgcgg
cgactgctcgaaaatggcgccaattcaagcttcgtcaatcagatcgccgacgaggacgtc
cccgtggaccggctgattgccgatccggtcgagatggcgcggcagattgcgccggtcggc
acccctcacgagcagatcgatctgccaaaagacattctggcggcgggacgccgcaattca
cgcgggatcgacctgtccaacgagcaggttctgcgggccctggaaaagagcctgaaggcc
ggcgccgaacgggcgtgggtggcaaaggccgaggacgcgaagggcgaagcccggcccgtt
ctcaatcctgccgatcatcgcgacgtggttggcgaagtgatcgagccttcggtggaccag
atcgacgccatcatggccagggcacagcgcgctgcttcaggatgggcgacaacaccgccc
gccgaacgcggcgcgatgctgatgcgggcggcgggcgccatggagagccagatggaaatc
ttcatgtcgctggccatgcgcgaagccggcaagacggcagccaatgcgattgccgaagtg
cgcgaggcggtcgatttcctgcgctattacggcaagcaggtcaaagagagctttgccaac
gacacccatatccctctggggccggtggtgtgcatttcgccgtggaatttcccgcttgcg
atctttaccgggcagatgtcggcggcgcttgtcgcgggcaacccggtgattgccaagccg
gccgaggaaacgccgctgattgcgcaattggcggtcgatttgatgcacgccgccggcgtg
ccggccgatgtgctgcagtttgcaccgggcgacggcaaggtgggcgcggcgctggtcggg
catcaagcaacatgcggggtgatgtttaccgggtcgaccgaggtagcgcggctgatccag
aaacaactggccggccggacactggccaatggcacaccggttccgctggtagcggaaacc
ggcggacagaatgctctggtggtggattcctcggcgctgaccgaacaggtggtgctggac
gtcctggcttctgccttcgacagcgccggacagcgctgttcggcgctgcgggtattgtgc
ctgcaggaggaagtggccgacaagacactcgacatgctcaagggcgcgatggcccaactc
gatatcggcaatcccgaccggctgacgattgacgtgggaccggtgattaccgccgaggcc
cgcgatgggatcaatgggcatatcgaggcgatgcgcgccaagggctgcgcggtaacgcag
ctcgatctgcccgaattggcggaacaagggacctatgtgccgccaacgctgatcgaattg
ggcgatatttcagagctggggcgcgaagtgttcgggccggtgctgcatgtggtgcgcttc
aagcgcaagaacctcgatgggttgctcgaaaagatcaacgcgctgggctatgggctgact
ttcgggctccatacgcggatcgacgcgacgattgcggaggtttcggccagaatcgaggtg
ggcaatatctacgtcaaccgcaaccagatcggcgccgttgtgggtgtgcagccgtttggg
ggacacgggctgtcgggcaccggccccaaggctggtggcccgctttatctgcgacggttg
gtacaaacgaccagccagacggtctgggggttgccggcgcgtcaggccggtccgacgttg
gtgacgctggccgaatggttgcgtggcaacagccaggacgatctggccgaggtgacgctg
aattatgccaaccatccggccatcaacgccttttccgagctggacgggcctgtgggtgag
cgcaacacttatctgaccaaaccaaagggcaaggttctgctcagcgcaaggacactgacc
gggcttgtgcatgggcttgcggcaggactggcagcgggaaatcagatgctggtcgaggct
tttggtgatctgggatcagtggttcgcgacctgcctgaggacatcagacagcgcgttgaa
atggtgcgcgaaatcggttcgggcgcggctcgggcggttctggtggaaggcgacggcgaa
gccgtgaccgcgatgagcaaggccgttgcggagtgggacggcccgatcgtgaccgtgcag
ggcgtttcgagcgaagcgctggagcatggcgaggcggtgttcgccatcgatctgctggtc
gatgaggtttcgaccagcgtcaatacggcagcggctgggggcaatgcaagcctgatggcg
ctggcctga

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