Paenibacillus nuruki: AASFL403_05285
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Entry
AASFL403_05285 CDS
T09651
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pnk
Paenibacillus nuruki
Pathway
pnk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pnk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AASFL403_05285 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnk03400
]
AASFL403_05285 (nth)
Enzymes [BR:
pnk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AASFL403_05285 (nth)
DNA repair and recombination proteins [BR:
pnk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AASFL403_05285 (nth)
Prokaryotic type
AASFL403_05285 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
CAJ1314599
LinkDB
All DBs
Position
403:1172179..1172892
Genome browser
AA seq
237 aa
AA seq
DB search
MNATTVRHILDTIAGMFPDAHCELNHNNAFELTIAVLLSAQCTDATVNKVTADLFQKYHT
PQDYISVPLEELEQDIRRIGLYRNKAKHIQNLCQILIEQYGGEVPGEHDLLVQLPGVGRK
TANVVVSNAFDVPAFAVDTHVERVSKRLGLANWKDNVTEVENKLNKRVPREEWTISHHRF
IFFGRYHCKAQNPACQVCPLLDICREGKKRMKTSLVIKEKKVKPKISKSVKKNNTTT
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccactacagtgagacatattttagataccatcgctggcatgttcccagatgcg
cactgcgaacttaatcataacaatgcgtttgaactgacgattgctgtactgctatcggca
caatgcacagatgcaacagtcaacaaggtgacggcagatttatttcagaaatatcacaca
ccacaggattatatctctgtacctcttgaagaattggaacaagatatacggcgtattgga
ttgtatcgcaacaaagcgaagcatatccagaacctatgccagattctgattgaacaatat
ggtggagaagtgcctggtgaacatgacctgcttgtacagctcccaggagttggacgtaag
acagcgaatgtggtcgtatccaatgcatttgatgtgccggcttttgcagtagatactcat
gttgaacgtgtatccaaaaggctaggactcgcaaactggaaagacaatgtgactgaagtg
gaaaacaagctgaacaagcgtgtacctcgagaggaatggacgattagtcatcatcgtttt
atctttttcggacggtatcattgcaaagctcaaaatcctgcttgtcaggtatgtccacta
ctggacatttgtcgtgaaggcaaaaaaagaatgaaaacgtctttagtgatcaaagagaaa
aaggtcaaaccgaaaatctcaaaatcagtaaagaaaaacaacactacaacataa
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