Candidatus Protochlamydia naegleriophila: PNK_0854
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Entry
PNK_0854 CDS
T04212
Symbol
mdh1
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
pnl
Candidatus Protochlamydia naegleriophila
Pathway
pnl00020
Citrate cycle (TCA cycle)
pnl00270
Cysteine and methionine metabolism
pnl00620
Pyruvate metabolism
pnl00630
Glyoxylate and dicarboxylate metabolism
pnl00680
Methane metabolism
pnl00710
Carbon fixation by Calvin cycle
pnl00720
Other carbon fixation pathways
pnl01100
Metabolic pathways
pnl01110
Biosynthesis of secondary metabolites
pnl01120
Microbial metabolism in diverse environments
pnl01200
Carbon metabolism
Module
pnl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pnl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pnl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PNK_0854 (mdh1)
00620 Pyruvate metabolism
PNK_0854 (mdh1)
00630 Glyoxylate and dicarboxylate metabolism
PNK_0854 (mdh1)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
PNK_0854 (mdh1)
00720 Other carbon fixation pathways
PNK_0854 (mdh1)
00680 Methane metabolism
PNK_0854 (mdh1)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
PNK_0854 (mdh1)
Enzymes [BR:
pnl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
PNK_0854 (mdh1)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
CUI16479
UniProt:
A0A0U5JDK4
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All DBs
Position
cPNK:1025287..1026273
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AA seq
328 aa
AA seq
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MPKPLKIAVTGGAGQIAYSLLFRIACGDLFGLDQPIALQILEVPAALQALEGVRMELEDG
AYPLLTSIRVTADPYQAFEGVHYALLIGAKPRGPGMERGDLLQENGKIFIEQGRALNEVA
DPSVKIFVVGNPCNTNCLIAMQHAPRIPKENFYAMTRLDQNRATFLLAQKAEVPITAVSN
VTIWGNHSATQVPDFMHAKIGGSPVESVIRDREWLENDFISLVQKRGAAIIQARGKSSAA
SAASALIDAIRDRFFPTPEGKWFSASICSDGNPYGMEEGLIFSFPCRTGADGKISIVPGL
ALDSFLEKKLKMTEKELKEERDLVKAVK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacctttgaaaattgccgtgacaggtggagctggacagattgcctacagcctc
ttgtttagaattgcatgtggagatttatttggactcgaccaacccattgcgttgcaaatt
ttagaagtgccggcggctttgcaagccctagaaggggtgcggatggagctggaggatggg
gcttatccgcttttgacctccattcgcgtgactgccgatccttatcaagcctttgaggga
gttcattatgctcttctgattggagctaagccaagagggcccggaatggaaagaggggat
ttgcttcaagagaatggaaaaatttttatcgagcaaggacgtgccttaaatgaggttgca
gatccttcagtgaagatttttgttgttggcaatccttgcaacacgaactgcctgattgcc
atgcagcatgctccgcgcattccgaaagaaaatttctacgcgatgacgcggcttgaccag
aaccgcgcgacctttctccttgctcaaaaagctgaggttcccataacagccgtctccaat
gtgaccatttggggaaatcactctgcgactcaagtgccagactttatgcatgccaagatc
ggtggtagtccggtagagtccgtgatccgtgatcgcgaatggctagaaaatgattttatt
agtttggttcaaaagaggggagcggccattatccaggctcgaggtaagtcttcagctgct
tctgctgccagtgcgttgattgatgcgattcgggatcgcttttttccaacacccgaagga
aaatggttttctgcaagcatttgctctgatgggaatccttatgggatggaagaggggttg
attttttcatttccgtgtcgtacaggggccgatggcaagatttccattgtacctgggcta
gcattggattcatttttggaaaagaagctgaaaatgacggagaaggaattaaaagaagaa
agagaccttgttaaagcagtcaaataa
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