KEGG   Parastagonospora nodorum: SNOG_03555
Entry
SNOG_03555        CDS       T01161                                 
Name
(RefSeq) hypothetical protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
pno  Parastagonospora nodorum
Pathway
pno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SNOG_03555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pno03019]
    SNOG_03555
   03041 Spliceosome [BR:pno03041]
    SNOG_03555
   03032 DNA replication proteins [BR:pno03032]
    SNOG_03555
Messenger RNA biogenesis [BR:pno03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     SNOG_03555
Spliceosome [BR:pno03041]
 Complex A
  U1 snRNP components
   Sm proteins
    SNOG_03555
  U2 snRNP components
    SNOG_03555
 Complex B
  U1 snRNP components
    SNOG_03555
  U4/U6.U5 tri-snRNP components
    SNOG_03555
 Complex C
  U2 snRNP components
    SNOG_03555
DNA replication proteins [BR:pno03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     SNOG_03555
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 5970976
NCBI-ProteinID: XP_001794113
LinkDB
Position
Unknown
AA seq 214 aa
MSGAANRQGKMVSKSINYRMKVTLQDGRQMVGQMLAFDKHMNLVLADTEEFRRTRRRGKA
APGATQSVTETEERRAIGLTIIRGAHVISLSVDGPPPADPAARLGAQPSGTATAATLAAG
PGVARPAGRGLPVGLTGPAPGVAGPGPGFGGGFPGGPPGFGGPPGFPGRGGPPGGGPPGF
PPAGGPPGFAGPPGFGGPPGFPGRGGPPPGFGGR
NT seq 645 nt   +upstreamnt  +downstreamnt
atgtctggagctgcaaacagacagggcaagatggtaagtaaatctatcaactaccgcatg
aaggtaacacttcaagatggtaggcagatggttggacagatgctcgcgttcgacaagcac
atgaacctggtccttgccgacacagaggagttccgccgcactcgacgacgaggaaaggcc
gcgcctggcgcaacccagagcgtcaccgagactgaggagcgacgcgcgatcggcctcacc
atcatccgcggtgcgcatgtcatctcactatctgtcgatgggccgccgcccgcagaccct
gccgcgaggcttggagcgcagcctagtggcaccgcaactgctgcgactctagccgctggt
cctggtgtcgcgcgaccggccggacgtggtctaccagttggcctgactggacccgcgcct
ggcgtcgcaggtcctggtcctggattcggtggaggatttcccggtggcccacctggcttt
ggtggcccacctggtttcccaggtcgtggcggaccacctggaggcggacctcccggtttc
cctcctgccggtggccctccaggtttcgcaggacctccaggcttcggtggacctcctggt
ttccctggccgcggtggacctcctcctggctttggtgggcgataa

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