Paenibacillus naphthalenovorans: IJ22_09830
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Entry
IJ22_09830 CDS
T04167
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pnp
Paenibacillus naphthalenovorans
Pathway
pnp00300
Lysine biosynthesis
pnp00550
Peptidoglycan biosynthesis
pnp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IJ22_09830
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IJ22_09830
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pnp01011
]
IJ22_09830
Enzymes [BR:
pnp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
IJ22_09830
Peptidoglycan biosynthesis and degradation proteins [BR:
pnp01011
]
Precursor biosynthesis
Amino acid ligase
IJ22_09830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
MoCF_biosynth
Motif
Other DBs
NCBI-ProteinID:
ALS21365
UniProt:
A0A0U2W1H8
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All DBs
Position
1002095..1003609
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AA seq
504 aa
AA seq
DB search
MQLKELASQLAVSRLVGDDRINITGLQTDSRKVNPGDLFICIPGFAVDGHDYAGKAVERG
AVALVAEREMELGVPVLIVKDARYAMAVLANHYYGYPSRELKLIGITGTNGKTTTTYLLE
KILSDQGFRTGLMGNIHVKIGSRYIPNAMTNTQEAVELQRILREMVNEGTDYCIMEASSH
GLELGRVKGCRFRTGIFTNLTQDHLDFHHTMEQYKAAKGLLFSRLGNEFSDDPNQSRFAV
LNADDPASKDYARLTAAQIITYGIEDPSADVRAEAIEISSKGTRFKCVTFRGSAEVSMRL
VGRFNVYNALAAIACALAEGIELARIADSLGRVDSVEGRMEIVNAGQEFLVLVDYAHTPD
GLENALSTIRQFAEGKVYCVFGCGGDRDRAKRPLMGGVAAKYADYVFVTSDNPRTENPER
ILQDIVPGLRTAGYDPGRYELVADRREAIQKAVDRAAPGDCILIAGKGHETYQDIMGVKH
PFDDRKVAKEAIMNRFRSSGSDGV
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgaaggaactcgcttctcagcttgcggtgagccgcctcgttggcgatgaccgc
atcaatattaccggattgcagacggattcccgcaaggtgaaccctggcgatttgtttatc
tgcatcccgggatttgccgtagacggacacgattatgcggggaaagcggttgagcgggga
gctgttgccttggttgccgagcgggagatggagctaggcgttcccgtgttgatcgtaaag
gatgcgcgatatgcgatggcggtgcttgcgaaccattattacggttatccgagccgcgag
ctgaagctgatcgggatcacggggaccaacggtaaaacaacaacaacttacttgctggaa
aaaatcttgagcgatcaagggtttcgaaccgggctgatgggcaacattcatgtcaagatc
ggttcccgatatattccaaacgcgatgacgaatacgcaggaagcagtggagcttcagcgg
attttacgtgagatggtgaacgaaggaacggattattgtatcatggaagcttcctcgcac
ggactggaattgggccgggtcaaaggatgtcgtttccgtacgggcattttcacgaattta
acccaggatcatctggactttcaccataccatggaacagtacaaggcggccaaaggactg
cttttctcccgtctcggcaatgaattttccgatgatccgaaccaaagcaggttcgccgtg
ctcaatgcggacgatcctgcatcgaaggattatgcgagactgactgccgcacaaatcata
acttatggaatcgaggatccgtctgcggatgtgagagctgaagcgatcgaaatttcttcg
aaaggtacacggttcaaatgtgtaacgtttcgcggaagcgccgaggtgagcatgcggctt
gtcgggcggtttaatgtatacaatgcgcttgcagccatcgcttgcgcgcttgcggagggg
attgagcttgcaaggattgccgacagcctcggccgggtggattcggttgaaggccggatg
gagatagtgaatgccggacaggagtttcttgttcttgtcgactatgcgcatacccctgac
ggtctggagaacgccctttcgacgattcgtcaatttgccgaaggcaaggtatactgcgtt
tttggctgcggaggagaccgcgaccgcgccaaacgtcccctgatgggtggcgtggcggcc
aagtatgcggattatgtattcgtcacttccgacaatccgcgtaccgagaacccggagcgc
attcttcaggacattgttccggggcttcgtaccgcagggtatgaccccggccgctacgag
ctggttgccgaccgcagagaagcgattcaaaaagcagtcgatcgcgcagctccgggcgac
tgcatcttgattgcggggaagggacacgaaacgtatcaggacatcatgggcgtcaagcat
ccttttgacgaccgcaaggtagccaaagaagcaatcatgaatcgctttcgttcatcggga
agcgatggggtttaa
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